RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 NUPR2A6NF83 97 aa13.28□□□□□ -0.28
CHMP2A-208ENST00000601220 ZNF207O43670 478 aaKnown RBP13.28□□□□□ -0.28
CHMP2A-208ENST00000601220 LY6G6CO95867 125 aa13.28□□□□□ -0.28
CHMP2A-208ENST00000601220 CTSDP07339 412 aaPredicted RBP13.28□□□□□ -0.28
CHMP2A-208ENST00000601220 ERVK-16P61578 105 aa13.28□□□□□ -0.28
CHMP2A-208ENST00000601220 NEDD8Q15843 81 aa13.28□□□□□ -0.28
CHMP2A-208ENST00000601220 C20orf24Q9BUV8 137 aa13.28□□□□□ -0.28
CHMP2A-208ENST00000601220 HINT2Q9BX68 163 aa13.28□□□□□ -0.28
CHMP2A-208ENST00000601220 Q9H521 79 aa13.28□□□□□ -0.28
CHMP2A-208ENST00000601220 MAP6D1Q9H9H5 199 aa13.28□□□□□ -0.28
CHMP2A-208ENST00000601220 IFT46Q9NQC8 304 aa13.28□□□□□ -0.28
CHMP2A-208ENST00000601220 TMEM14BQ9NUH8 114 aa13.28□□□□□ -0.28
CHMP2A-208ENST00000601220 SMPXQ9UHP9 88 aa13.28□□□□□ -0.28
CHMP2A-208ENST00000601220 C15orf62A8K5M9 175 aa13.27□□□□□ -0.29
CHMP2A-208ENST00000601220 RPS19P39019 145 aaKnown RBP13.27□□□□□ -0.29
CHMP2A-208ENST00000601220 TAS2R20P59543 309 aa13.27□□□□□ -0.29
CHMP2A-208ENST00000601220 UBE2NLQ5JXB2 153 aa13.27□□□□□ -0.29
CHMP2A-208ENST00000601220 STPG3Q8N7X2 389 aa13.27□□□□□ -0.29
CHMP2A-208ENST00000601220 OR5B3Q8NH48 314 aa13.27□□□□□ -0.29
CHMP2A-208ENST00000601220 RNF2Q99496 336 aa13.27□□□□□ -0.29
CHMP2A-208ENST00000601220 PRNDQ9UKY0 176 aa13.27□□□□□ -0.29
CHMP2A-208ENST00000601220 DNAH10Q8IVF4 4471 aa13.27□□□□□ -0.29
CHMP2A-208ENST00000601220 OR4C46A6NHA9 309 aa13.26□□□□□ -0.29
CHMP2A-208ENST00000601220 I3L2K1 104 aa13.26□□□□□ -0.29
CHMP2A-208ENST00000601220 GPR31O00270 319 aa13.26□□□□□ -0.29
CHMP2A-208ENST00000601220 CHEK1O14757 476 aa13.26□□□□□ -0.29
CHMP2A-208ENST00000601220 RPL35AP18077 110 aaKnown RBP13.26□□□□□ -0.29
CHMP2A-208ENST00000601220 FCGR2BP31994 310 aaPredicted RBP13.26□□□□□ -0.29
CHMP2A-208ENST00000601220 OR1P1Q8NH06 330 aa13.26□□□□□ -0.29
CHMP2A-208ENST00000601220 GALNT14Q96FL9 552 aa13.26□□□□□ -0.29
CHMP2A-208ENST00000601220 OR10C1Q96KK4 312 aa13.26□□□□□ -0.29
CHMP2A-208ENST00000601220 IGHV7-4-1A0A0J9YVY3 117 aa13.25□□□□□ -0.29
CHMP2A-208ENST00000601220 C15orf61A6NNL5 157 aa13.25□□□□□ -0.29
CHMP2A-208ENST00000601220 SNAPC5O75971 98 aa13.25□□□□□ -0.29
CHMP2A-208ENST00000601220 TAS2R46P59540 309 aa13.25□□□□□ -0.29
CHMP2A-208ENST00000601220 ZNF124Q15973 351 aa13.25□□□□□ -0.29
CHMP2A-208ENST00000601220 Q56UQ5 140 aa13.25□□□□□ -0.29
CHMP2A-208ENST00000601220 FAM90A2PQ658T7 463 aa13.25□□□□□ -0.29
CHMP2A-208ENST00000601220 CROCCP3Q8IVE0 287 aa13.25□□□□□ -0.29
CHMP2A-208ENST00000601220 APRG1Q8IVJ8 170 aa13.25□□□□□ -0.29
CHMP2A-208ENST00000601220 CMTM1Q8IZ96 169 aa13.25□□□□□ -0.29
CHMP2A-208ENST00000601220 SAMD12Q8N8I0 201 aa13.25□□□□□ -0.29
CHMP2A-208ENST00000601220 UBAC2Q8NBM4 344 aa13.25□□□□□ -0.29
CHMP2A-208ENST00000601220 OR5H2Q8NGV7 314 aa13.25□□□□□ -0.29
CHMP2A-208ENST00000601220 OR6F1Q8NGZ6 308 aa13.25□□□□□ -0.29
CHMP2A-208ENST00000601220 FAM212BQ9NTI7 297 aaPredicted RBP13.25□□□□□ -0.29
CHMP2A-208ENST00000601220 IGKV1-39P01597 117 aa13.24□□□□□ -0.29
CHMP2A-208ENST00000601220 IGKV1D-39P04432 117 aa13.24□□□□□ -0.29
CHMP2A-208ENST00000601220 HRH1P35367 487 aa13.24□□□□□ -0.29
CHMP2A-208ENST00000601220 KCTD21Q4G0X4 260 aa13.24□□□□□ -0.29
CHMP2A-208ENST00000601220 TMEM69Q5SWH9 247 aa13.24□□□□□ -0.29
CHMP2A-208ENST00000601220 YIPF6Q96EC8 236 aa13.24□□□□□ -0.29
CHMP2A-208ENST00000601220 SEC22AQ96IW7 307 aa13.24□□□□□ -0.29
CHMP2A-208ENST00000601220 TMEM56Q96MV1 263 aa13.24□□□□□ -0.29
CHMP2A-208ENST00000601220 RHPN1-AS1Q9BWJ2 59 aa13.24□□□□□ -0.29
CHMP2A-208ENST00000601220 FKBP11Q9NYL4 201 aa13.24□□□□□ -0.29
CHMP2A-208ENST00000601220 HLA-DMAP28067 261 aa13.23□□□□□ -0.29
CHMP2A-208ENST00000601220 PRSS3P35030 304 aa13.23□□□□□ -0.29
CHMP2A-208ENST00000601220 PHLDA2Q53GA4 152 aa13.23□□□□□ -0.29
CHMP2A-208ENST00000601220 ZNF114Q8NC26 417 aa13.23□□□□□ -0.29
CHMP2A-208ENST00000601220 TMEM116Q8NCL8 245 aa13.23□□□□□ -0.29
CHMP2A-208ENST00000601220 GPX8Q8TED1 209 aa13.23□□□□□ -0.29
CHMP2A-208ENST00000601220 TSC22D3Q99576 134 aa13.23□□□□□ -0.29
CHMP2A-208ENST00000601220 TXN2Q99757 166 aa13.23□□□□□ -0.29
CHMP2A-208ENST00000601220 RPP25LQ8N5L8 163 aaKnown RBP13.22□□□□□ -0.29
CHMP2A-208ENST00000601220 TSPAN14Q8NG11 270 aa13.22□□□□□ -0.29
CHMP2A-208ENST00000601220 SLC25A46Q96AG3 418 aa13.22□□□□□ -0.29
CHMP2A-208ENST00000601220 NXF2Q9GZY0 626 aaKnown RBP13.22□□□□□ -0.29
CHMP2A-208ENST00000601220 CSTL1Q9H114 145 aa13.22□□□□□ -0.29
CHMP2A-208ENST00000601220 KLK5Q9Y337 293 aaPredicted RBP13.22□□□□□ -0.29
CHMP2A-208ENST00000601220 IGHV3-49A0A0A0MS15 119 aa13.21□□□□□ -0.29
CHMP2A-208ENST00000601220 NUPL2O15504 423 aaKnown RBP13.21□□□□□ -0.29
CHMP2A-208ENST00000601220 MT-CO2P00403 227 aa13.21□□□□□ -0.29
CHMP2A-208ENST00000601220 EIF4EP06730 217 aaKnown RBP13.21□□□□□ -0.29
CHMP2A-208ENST00000601220 MFAP4P55083 255 aa13.21□□□□□ -0.29
CHMP2A-208ENST00000601220 RELQ04864 619 aaPredicted RBP13.21□□□□□ -0.29
CHMP2A-208ENST00000601220 TBC1D26Q86UD7 250 aa13.21□□□□□ -0.29
CHMP2A-208ENST00000601220 LILRB2Q8N423 598 aa13.21□□□□□ -0.29
CHMP2A-208ENST00000601220 PHLDA1Q8WV24 401 aaPredicted RBP13.21□□□□□ -0.29
CHMP2A-208ENST00000601220 IGHV3-48P01763 117 aa13.2□□□□□ -0.3
CHMP2A-208ENST00000601220 UCP3P55916 312 aa13.2□□□□□ -0.3
CHMP2A-208ENST00000601220 LSM3P62310 102 aaKnown RBP13.2□□□□□ -0.3
CHMP2A-208ENST00000601220 PRCDQ00LT1 54 aa13.2□□□□□ -0.3
CHMP2A-208ENST00000601220 LPCAT3Q6P1A2 487 aa13.2□□□□□ -0.3
CHMP2A-208ENST00000601220 TMEM217Q8N7C4 229 aa13.2□□□□□ -0.3
CHMP2A-208ENST00000601220 MISP3Q96FF7 219 aa13.2□□□□□ -0.3
CHMP2A-208ENST00000601220 TRAV14DV4A0A0A6YYC5 116 aa13.19□□□□□ -0.3
CHMP2A-208ENST00000601220 YIF1AO95070 293 aa13.19□□□□□ -0.3
CHMP2A-208ENST00000601220 TFPI2P48307 235 aa13.19□□□□□ -0.3
CHMP2A-208ENST00000601220 CMC4P56277 68 aaPredicted RBP13.19□□□□□ -0.3
CHMP2A-208ENST00000601220 HSPE1P61604 102 aaKnown RBP13.19□□□□□ -0.3
CHMP2A-208ENST00000601220 PVRIGQ6DKI7 326 aa13.19□□□□□ -0.3
CHMP2A-208ENST00000601220 GATAD1Q8WUU5 269 aa13.19□□□□□ -0.3
CHMP2A-208ENST00000601220 VPS13DQ5THJ4 4388 aa13.18□□□□□ -0.3
CHMP2A-208ENST00000601220 IGHV3OR16-13A0A075B7E8 117 aa13.18□□□□□ -0.3
CHMP2A-208ENST00000601220 IGHV3-74A0A0B4J1X5 117 aa13.18□□□□□ -0.3
CHMP2A-208ENST00000601220 MPTX1A8MV57 137 aa13.18□□□□□ -0.3
CHMP2A-208ENST00000601220 APOHP02749 345 aaPredicted RBP13.18□□□□□ -0.3
CHMP2A-208ENST00000601220 TOMM20LQ6UXN7 152 aa13.18□□□□□ -0.3
CHMP2A-208ENST00000601220 H2BFWTQ7Z2G1 175 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms