RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 HAPLN4Q86UW8 402 aa17.97■□□□□ 0.47
IRF3-227ENST00000600911 PRIMA1Q86XR5 153 aa17.97■□□□□ 0.47
IRF3-227ENST00000600911 SMIM8Q96KF7 97 aa17.97■□□□□ 0.47
IRF3-227ENST00000600911 PPIFP30405 207 aaKnown RBP17.96■□□□□ 0.47
IRF3-227ENST00000600911 TMEM267Q0VDI3 215 aaPredicted RBP17.96■□□□□ 0.47
IRF3-227ENST00000600911 TTC9CQ8N5M4 171 aa17.96■□□□□ 0.47
IRF3-227ENST00000600911 RAB40CQ96S21 281 aa17.96■□□□□ 0.47
IRF3-227ENST00000600911 ENY2Q9NPA8 101 aa17.96■□□□□ 0.47
IRF3-227ENST00000600911 FXYD6-FXYD2A0A087WZ82 144 aa17.95■□□□□ 0.46
IRF3-227ENST00000600911 PFDN1O60925 122 aa17.95■□□□□ 0.46
IRF3-227ENST00000600911 FBXO24O75426 580 aa17.95■□□□□ 0.46
IRF3-227ENST00000600911 CRYGCP07315 174 aa17.95■□□□□ 0.46
IRF3-227ENST00000600911 AKIRIN2Q53H80 203 aa17.95■□□□□ 0.46
IRF3-227ENST00000600911 HIST2H2BDQ6DRA6 164 aa17.95■□□□□ 0.46
IRF3-227ENST00000600911 ZNF329Q86UD4 541 aa17.95■□□□□ 0.46
IRF3-227ENST00000600911 DCUN1D4Q92564 292 aa17.95■□□□□ 0.46
IRF3-227ENST00000600911 WNT10AQ9GZT5 417 aa17.95■□□□□ 0.46
IRF3-227ENST00000600911 PMS2P5A8MQ11 134 aa17.94■□□□□ 0.46
IRF3-227ENST00000600911 AP4M1O00189 453 aa17.94■□□□□ 0.46
IRF3-227ENST00000600911 SLC25A4P12235 298 aa17.94■□□□□ 0.46
IRF3-227ENST00000600911 ARL16Q0P5N6 197 aa17.94■□□□□ 0.46
IRF3-227ENST00000600911 LCNL1Q6ZST4 164 aa17.94■□□□□ 0.46
IRF3-227ENST00000600911 SLC24A4Q8NFF2 622 aa17.94■□□□□ 0.46
IRF3-227ENST00000600911 THAP6Q8TBB0 222 aa17.94■□□□□ 0.46
IRF3-227ENST00000600911 FANCD2OSQ96PS1 177 aa17.94■□□□□ 0.46
IRF3-227ENST00000600911 HIPK2Q9H2X6 1198 aa17.94■□□□□ 0.46
IRF3-227ENST00000600911 NPIPB5A8MRT5 1133 aa17.94■□□□□ 0.46
IRF3-227ENST00000600911 E5RGE8 158 aa17.94■□□□□ 0.46
IRF3-227ENST00000600911 BOLA2-SMG1P6H3BVE0 249 aa17.94■□□□□ 0.46
IRF3-227ENST00000600911 L7N2F9 121 aa17.94■□□□□ 0.46
IRF3-227ENST00000600911 VAMP2P63027 116 aa17.94■□□□□ 0.46
IRF3-227ENST00000600911 TMEM14EPQ6UXP3 125 aa17.94■□□□□ 0.46
IRF3-227ENST00000600911 FAM110DQ8TAY7 271 aaPredicted RBP17.94■□□□□ 0.46
IRF3-227ENST00000600911 SRSF8Q9BRL6 282 aaKnown RBP17.94■□□□□ 0.46
IRF3-227ENST00000600911 LYRM2Q9NU23 88 aaPredicted RBP17.94■□□□□ 0.46
IRF3-227ENST00000600911 F11RQ9Y624 299 aaKnown RBP17.94■□□□□ 0.46
IRF3-227ENST00000600911 SETD2Q9BYW2 2564 aaPredicted RBP17.93■□□□□ 0.46
IRF3-227ENST00000600911 RNF222A6NCQ9 220 aa17.93■□□□□ 0.46
IRF3-227ENST00000600911 IFNA10P01566 189 aa17.93■□□□□ 0.46
IRF3-227ENST00000600911 C1QBP02746 253 aa17.93■□□□□ 0.46
IRF3-227ENST00000600911 RLN2P04090 185 aa17.93■□□□□ 0.46
IRF3-227ENST00000600911 CRYBA1P05813 215 aa17.93■□□□□ 0.46
IRF3-227ENST00000600911 METTL15P1P0C7V9 234 aa17.93■□□□□ 0.46
IRF3-227ENST00000600911 HKR1P10072 659 aa17.93■□□□□ 0.46
IRF3-227ENST00000600911 NPY1RP25929 384 aa17.93■□□□□ 0.46
IRF3-227ENST00000600911 CAV2P51636 162 aa17.93■□□□□ 0.46
IRF3-227ENST00000600911 NKX2-5P52952 324 aaPredicted RBP17.93■□□□□ 0.46
IRF3-227ENST00000600911 RPL15P61313 204 aaKnown RBP17.93■□□□□ 0.46
IRF3-227ENST00000600911 ERHP84090 104 aaKnown RBP17.93■□□□□ 0.46
IRF3-227ENST00000600911 MLANAQ16655 118 aa17.93■□□□□ 0.46
IRF3-227ENST00000600911 ARSJQ5FYB0 599 aaPredicted RBP17.93■□□□□ 0.46
IRF3-227ENST00000600911 TMEM252Q8N6L7 170 aa17.93■□□□□ 0.46
IRF3-227ENST00000600911 ZNF114Q8NC26 417 aa17.93■□□□□ 0.46
IRF3-227ENST00000600911 LINC01006Q8NI28 216 aa17.93■□□□□ 0.46
IRF3-227ENST00000600911 TAS2R30P59541 319 aa17.92■□□□□ 0.46
IRF3-227ENST00000600911 FGL1Q08830 312 aa17.92■□□□□ 0.46
IRF3-227ENST00000600911 PVRIGQ6DKI7 326 aa17.92■□□□□ 0.46
IRF3-227ENST00000600911 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.92■□□□□ 0.46
IRF3-227ENST00000600911 CIB3Q96Q77 187 aaPredicted RBP17.92■□□□□ 0.46
IRF3-227ENST00000600911 ZFP57Q9NU63 452 aa17.92■□□□□ 0.46
IRF3-227ENST00000600911 CACFD1Q9UGQ2 172 aa17.92■□□□□ 0.46
IRF3-227ENST00000600911 PAIP2BQ9ULR5 123 aaKnown RBP17.92■□□□□ 0.46
IRF3-227ENST00000600911 TNFSF18Q9UNG2 199 aa17.92■□□□□ 0.46
IRF3-227ENST00000600911 PRSS46E5RG02 174 aa17.91■□□□□ 0.46
IRF3-227ENST00000600911 TSC22D2O75157 780 aa17.91■□□□□ 0.46
IRF3-227ENST00000600911 CST7O76096 145 aa17.91■□□□□ 0.46
IRF3-227ENST00000600911 P2RY1P47900 373 aa17.91■□□□□ 0.46
IRF3-227ENST00000600911 NHLH2Q02577 135 aa17.91■□□□□ 0.46
IRF3-227ENST00000600911 C2orf83Q53S99 150 aa17.91■□□□□ 0.46
IRF3-227ENST00000600911 KLK15Q9H2R5 256 aa17.91■□□□□ 0.46
IRF3-227ENST00000600911 C16orf95Q9H693 158 aa17.91■□□□□ 0.46
IRF3-227ENST00000600911 IGHV3-21A0A0B4J1V1 117 aa17.9■□□□□ 0.46
IRF3-227ENST00000600911 PET100P0DJ07 73 aa17.9■□□□□ 0.46
IRF3-227ENST00000600911 PVALBP20472 110 aaPredicted RBP17.9■□□□□ 0.46
IRF3-227ENST00000600911 HTR2BP41595 481 aa17.9■□□□□ 0.46
IRF3-227ENST00000600911 RPL23AP62750 156 aaKnown RBP17.9■□□□□ 0.46
IRF3-227ENST00000600911 HSD17B13Q7Z5P4 300 aaPredicted RBP17.9■□□□□ 0.46
IRF3-227ENST00000600911 OR2T6Q8NHC8 308 aa17.9■□□□□ 0.46
IRF3-227ENST00000600911 MS4A10Q96PG2 267 aa17.9■□□□□ 0.46
IRF3-227ENST00000600911 ZNF580Q9UK33 172 aa17.9■□□□□ 0.46
IRF3-227ENST00000600911 STRAPQ9Y3F4 350 aaKnown RBP17.9■□□□□ 0.46
IRF3-227ENST00000600911 U3KQ87 197 aa17.9■□□□□ 0.46
IRF3-227ENST00000600911 IGLV11-55A0A075B6I3 123 aa17.9■□□□□ 0.46
IRF3-227ENST00000600911 ARPC5O15511 151 aa17.9■□□□□ 0.46
IRF3-227ENST00000600911 NDUFA7O95182 113 aa17.9■□□□□ 0.46
IRF3-227ENST00000600911 IGHV3-48P01763 117 aa17.9■□□□□ 0.46
IRF3-227ENST00000600911 MDKP21741 143 aaPredicted RBP17.9■□□□□ 0.46
IRF3-227ENST00000600911 SNCAP37840 140 aa17.9■□□□□ 0.46
IRF3-227ENST00000600911 EWSR1Q01844 656 aaKnown RBP eCLIP17.9■□□□□ 0.46
IRF3-227ENST00000600911 ZNF546Q86UE3 836 aa17.9■□□□□ 0.46
IRF3-227ENST00000600911 FNDC4Q9H6D8 234 aaPredicted RBP17.9■□□□□ 0.46
IRF3-227ENST00000600911 IGLV1-40P01703 118 aa17.89■□□□□ 0.45
IRF3-227ENST00000600911 CXCL2P19875 107 aa17.89■□□□□ 0.45
IRF3-227ENST00000600911 OR1P1Q8NH06 330 aa17.89■□□□□ 0.45
IRF3-227ENST00000600911 WIPF2Q8TF74 440 aaPredicted RBP17.89■□□□□ 0.45
IRF3-227ENST00000600911 MRPL36Q9P0J6 103 aaKnown RBP17.89■□□□□ 0.45
IRF3-227ENST00000600911 S4R3C0 116 aa17.89■□□□□ 0.45
IRF3-227ENST00000600911 RPL12P30050 165 aaKnown RBP17.88■□□□□ 0.45
IRF3-227ENST00000600911 ZFP69Q49AA0 526 aa17.88■□□□□ 0.45
IRF3-227ENST00000600911 OR8G2PQ6IF36 304 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms