RNA–Protein interactions for RNA: ENST00000597968.1

TRIM28-211, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-211ENST00000597968 OR10W1Q8NGF6 305 aa10.14□□□□□ -0.79
TRIM28-211ENST00000597968 OR5H2Q8NGV7 314 aa10.14□□□□□ -0.79
TRIM28-211ENST00000597968 OR1P1Q8NH06 330 aa10.14□□□□□ -0.79
TRIM28-211ENST00000597968 TXN2Q99757 166 aa10.14□□□□□ -0.79
TRIM28-211ENST00000597968 OR2T8A6NH00 312 aa10.13□□□□□ -0.79
TRIM28-211ENST00000597968 SPRY2O43597 315 aa10.13□□□□□ -0.79
TRIM28-211ENST00000597968 TNFAIP8O95379 198 aa10.13□□□□□ -0.79
TRIM28-211ENST00000597968 RLN1P04808 185 aa10.13□□□□□ -0.79
TRIM28-211ENST00000597968 EIF4EP06730 217 aaKnown RBP10.13□□□□□ -0.79
TRIM28-211ENST00000597968 PRSS3P35030 304 aa10.13□□□□□ -0.79
TRIM28-211ENST00000597968 SCARB1Q8WTV0 552 aa10.13□□□□□ -0.79
TRIM28-211ENST00000597968 FCAMRQ8WWV6 532 aa10.13□□□□□ -0.79
TRIM28-211ENST00000597968 GALNT14Q96FL9 552 aa10.13□□□□□ -0.79
TRIM28-211ENST00000597968 FUNDC2Q9BWH2 189 aa10.13□□□□□ -0.79
TRIM28-211ENST00000597968 C6orf62Q9GZU0 229 aaPredicted RBP10.13□□□□□ -0.79
TRIM28-211ENST00000597968 VCX3AQ9NNX9 186 aa10.13□□□□□ -0.79
TRIM28-211ENST00000597968 TMEM14BQ9NUH8 114 aa10.13□□□□□ -0.79
TRIM28-211ENST00000597968 COMMD3Q9UBI1 195 aa10.13□□□□□ -0.79
TRIM28-211ENST00000597968 OR51B2Q9Y5P1 312 aa10.13□□□□□ -0.79
TRIM28-211ENST00000597968 SELENOKQ9Y6D0 94 aa10.13□□□□□ -0.79
TRIM28-211ENST00000597968 ALMS1Q8TCU4 4167 aa10.12□□□□□ -0.79
TRIM28-211ENST00000597968 KRASP01116 189 aa10.12□□□□□ -0.79
TRIM28-211ENST00000597968 LPAR6P43657 344 aa10.12□□□□□ -0.79
TRIM28-211ENST00000597968 VBP1P61758 197 aa10.12□□□□□ -0.79
TRIM28-211ENST00000597968 LYSMD2Q8IV50 215 aa10.12□□□□□ -0.79
TRIM28-211ENST00000597968 STPG3Q8N7X2 389 aa10.12□□□□□ -0.79
TRIM28-211ENST00000597968 ZNF114Q8NC26 417 aa10.12□□□□□ -0.79
TRIM28-211ENST00000597968 SLC25A46Q96AG3 418 aa10.12□□□□□ -0.79
TRIM28-211ENST00000597968 OR10C1Q96KK4 312 aa10.12□□□□□ -0.79
TRIM28-211ENST00000597968 SCPEP1Q9HB40 452 aa10.12□□□□□ -0.79
TRIM28-211ENST00000597968 C15orf61A6NNL5 157 aa10.11□□□□□ -0.79
TRIM28-211ENST00000597968 K7EIM0 57 aa10.11□□□□□ -0.79
TRIM28-211ENST00000597968 NUPL2O15504 423 aaKnown RBP10.11□□□□□ -0.79
TRIM28-211ENST00000597968 HLA-DMAP28067 261 aa10.11□□□□□ -0.79
TRIM28-211ENST00000597968 UCP3P55916 312 aa10.11□□□□□ -0.79
TRIM28-211ENST00000597968 LINC00476Q8WZB0 136 aa10.11□□□□□ -0.79
TRIM28-211ENST00000597968 RNF183Q96D59 192 aa10.11□□□□□ -0.79
TRIM28-211ENST00000597968 SMIM31A0A1B0GVY4 71 aa10.1□□□□□ -0.79
TRIM28-211ENST00000597968 F8W735 103 aaPredicted RBP10.1□□□□□ -0.79
TRIM28-211ENST00000597968 APOA1P02647 267 aa10.1□□□□□ -0.79
TRIM28-211ENST00000597968 CTSGP08311 255 aa10.1□□□□□ -0.79
TRIM28-211ENST00000597968 ADMP35318 185 aa10.1□□□□□ -0.79
TRIM28-211ENST00000597968 G6PCP35575 357 aa10.1□□□□□ -0.79
TRIM28-211ENST00000597968 ODF3L2Q3SX64 289 aa10.1□□□□□ -0.79
TRIM28-211ENST00000597968 Q56UQ5 140 aa10.1□□□□□ -0.79
TRIM28-211ENST00000597968 GPX8Q8TED1 209 aa10.1□□□□□ -0.79
TRIM28-211ENST00000597968 CHRDL1Q9BU40 450 aa10.1□□□□□ -0.79
TRIM28-211ENST00000597968 NAA50Q9GZZ1 169 aaKnown RBP10.1□□□□□ -0.79
TRIM28-211ENST00000597968 SMPXQ9UHP9 88 aa10.1□□□□□ -0.79
TRIM28-211ENST00000597968 KLK5Q9Y337 293 aaPredicted RBP10.1□□□□□ -0.79
TRIM28-211ENST00000597968 IGHV3-35A0A0C4DH35 117 aa10.09□□□□□ -0.79
TRIM28-211ENST00000597968 HPGDSO60760 199 aa10.09□□□□□ -0.79
TRIM28-211ENST00000597968 HRH1P35367 487 aa10.09□□□□□ -0.79
TRIM28-211ENST00000597968 MFAP2P55001 183 aa10.09□□□□□ -0.79
TRIM28-211ENST00000597968 MFAP4P55083 255 aa10.09□□□□□ -0.79
TRIM28-211ENST00000597968 TSPAN5P62079 268 aa10.09□□□□□ -0.79
TRIM28-211ENST00000597968 LYG2Q86SG7 212 aa10.09□□□□□ -0.79
TRIM28-211ENST00000597968 SNX29P2Q8IUI4 249 aa10.09□□□□□ -0.79
TRIM28-211ENST00000597968 GATAD1Q8WUU5 269 aa10.09□□□□□ -0.79
TRIM28-211ENST00000597968 SEC22AQ96IW7 307 aa10.09□□□□□ -0.79
TRIM28-211ENST00000597968 GINS3Q9BRX5 216 aa10.09□□□□□ -0.79
TRIM28-211ENST00000597968 C20orf24Q9BUV8 137 aa10.09□□□□□ -0.79
TRIM28-211ENST00000597968 HINT2Q9BX68 163 aa10.09□□□□□ -0.79
TRIM28-211ENST00000597968 FXYD6Q9H0Q3 95 aa10.09□□□□□ -0.79
TRIM28-211ENST00000597968 MAP6D1Q9H9H5 199 aa10.09□□□□□ -0.79
TRIM28-211ENST00000597968 IGHV7-4-1A0A0J9YVY3 117 aa10.08□□□□□ -0.8
TRIM28-211ENST00000597968 A0A0J9YWU9 116 aa10.08□□□□□ -0.8
TRIM28-211ENST00000597968 CXorf65A6NEN9 183 aa10.08□□□□□ -0.8
TRIM28-211ENST00000597968 INS-IGF2F8WCM5 200 aa10.08□□□□□ -0.8
TRIM28-211ENST00000597968 I3L2K1 104 aa10.08□□□□□ -0.8
TRIM28-211ENST00000597968 ELK1P19419 428 aa10.08□□□□□ -0.8
TRIM28-211ENST00000597968 RCVRNP35243 200 aa10.08□□□□□ -0.8
TRIM28-211ENST00000597968 HSPE1P61604 102 aaKnown RBP10.08□□□□□ -0.8
TRIM28-211ENST00000597968 PAFAH1B2P68402 229 aa10.08□□□□□ -0.8
TRIM28-211ENST00000597968 ERHP84090 104 aaKnown RBP10.08□□□□□ -0.8
TRIM28-211ENST00000597968 PRCDQ00LT1 54 aa10.08□□□□□ -0.8
TRIM28-211ENST00000597968 PHLDA2Q53GA4 152 aa10.08□□□□□ -0.8
TRIM28-211ENST00000597968 CEMP1Q6PRD7 247 aaPredicted RBP10.08□□□□□ -0.8
TRIM28-211ENST00000597968 H2BFWTQ7Z2G1 175 aa10.08□□□□□ -0.8
TRIM28-211ENST00000597968 UBAC2Q8NBM4 344 aa10.08□□□□□ -0.8
TRIM28-211ENST00000597968 TMEM116Q8NCL8 245 aa10.08□□□□□ -0.8
TRIM28-211ENST00000597968 OR4A16Q8NH70 328 aa10.08□□□□□ -0.8
TRIM28-211ENST00000597968 ZNF486Q96H40 463 aaPredicted RBP10.08□□□□□ -0.8
TRIM28-211ENST00000597968 NXF2Q9GZY0 626 aaKnown RBP10.08□□□□□ -0.8
TRIM28-211ENST00000597968 NSG2Q9Y328 171 aa10.08□□□□□ -0.8
TRIM28-211ENST00000597968 TRAV14DV4A0A0A6YYC5 116 aa10.07□□□□□ -0.8
TRIM28-211ENST00000597968 TRAV2A0A0B4J234 112 aa10.07□□□□□ -0.8
TRIM28-211ENST00000597968 CHEK1O14757 476 aa10.07□□□□□ -0.8
TRIM28-211ENST00000597968 ATG12O94817 140 aa10.07□□□□□ -0.8
TRIM28-211ENST00000597968 CTSDP07339 412 aaPredicted RBP10.07□□□□□ -0.8
TRIM28-211ENST00000597968 SMIM18P0DKX4 95 aa10.07□□□□□ -0.8
TRIM28-211ENST00000597968 DEFB135Q30KP9 77 aa10.07□□□□□ -0.8
TRIM28-211ENST00000597968 RNASE12Q5GAN4 147 aaKnown RBP10.07□□□□□ -0.8
TRIM28-211ENST00000597968 TBC1D26Q86UD7 250 aa10.07□□□□□ -0.8
TRIM28-211ENST00000597968 RHPN1-AS1Q9BWJ2 59 aa10.07□□□□□ -0.8
TRIM28-211ENST00000597968 CSTL1Q9H114 145 aa10.07□□□□□ -0.8
TRIM28-211ENST00000597968 CORTO00230 105 aa10.06□□□□□ -0.8
TRIM28-211ENST00000597968 B3GALNT1O75752 331 aa10.06□□□□□ -0.8
TRIM28-211ENST00000597968 DFFBO76075 338 aa10.06□□□□□ -0.8
TRIM28-211ENST00000597968 TBPP20226 339 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms