RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 EBI3Q14213 229 aa13.74□□□□□ -0.21
CIRBP-235ENST00000591935 IL34Q6ZMJ4 242 aa13.74□□□□□ -0.21
CIRBP-235ENST00000591935 MOB3BQ86TA1 216 aa13.74□□□□□ -0.21
CIRBP-235ENST00000591935 CCDC28AQ8IWP9 274 aa13.74□□□□□ -0.21
CIRBP-235ENST00000591935 COMMD1Q8N668 190 aa13.74□□□□□ -0.21
CIRBP-235ENST00000591935 MRAPQ8TCY5 172 aa13.74□□□□□ -0.21
CIRBP-235ENST00000591935 SMIM3Q9BZL3 60 aa13.74□□□□□ -0.21
CIRBP-235ENST00000591935 MAGT1Q9H0U3 335 aa13.74□□□□□ -0.21
CIRBP-235ENST00000591935 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.74□□□□□ -0.21
CIRBP-235ENST00000591935 TXNL1O43396 289 aa13.73□□□□□ -0.21
CIRBP-235ENST00000591935 DFFBO76075 338 aa13.73□□□□□ -0.21
CIRBP-235ENST00000591935 SPP1P10451 314 aa13.73□□□□□ -0.21
CIRBP-235ENST00000591935 DUTP33316 252 aaKnown RBP13.73□□□□□ -0.21
CIRBP-235ENST00000591935 OR2T10Q8NGZ9 312 aa13.73□□□□□ -0.21
CIRBP-235ENST00000591935 RBMXL1Q96E39 390 aaKnown RBP13.73□□□□□ -0.21
CIRBP-235ENST00000591935 BSCL2Q96G97 398 aaPredicted RBP13.73□□□□□ -0.21
CIRBP-235ENST00000591935 ADTRPQ96IZ2 230 aa13.73□□□□□ -0.21
CIRBP-235ENST00000591935 PARP11Q9NR21 331 aa13.73□□□□□ -0.21
CIRBP-235ENST00000591935 STRAPQ9Y3F4 350 aaKnown RBP13.73□□□□□ -0.21
CIRBP-235ENST00000591935 DNAH3Q8TD57 4116 aa13.72□□□□□ -0.21
CIRBP-235ENST00000591935 IGHV3-72A0A0B4J1Y9 119 aa13.72□□□□□ -0.21
CIRBP-235ENST00000591935 ZNF705EA8MWA4 302 aaPredicted RBP13.72□□□□□ -0.21
CIRBP-235ENST00000591935 SLC31A2O15432 143 aa13.72□□□□□ -0.21
CIRBP-235ENST00000591935 TMEM50AO95807 157 aa13.72□□□□□ -0.21
CIRBP-235ENST00000591935 HPRT1P00492 218 aa13.72□□□□□ -0.21
CIRBP-235ENST00000591935 IGHG2P01859 326 aa13.72□□□□□ -0.21
CIRBP-235ENST00000591935 IGLL1P15814 213 aa13.72□□□□□ -0.21
CIRBP-235ENST00000591935 CD1BP29016 333 aa13.72□□□□□ -0.21
CIRBP-235ENST00000591935 BRWD1-AS2P59051 145 aa13.72□□□□□ -0.21
CIRBP-235ENST00000591935 SLC35E3Q7Z769 313 aa13.72□□□□□ -0.21
CIRBP-235ENST00000591935 ZNF329Q86UD4 541 aa13.72□□□□□ -0.21
CIRBP-235ENST00000591935 STX12Q86Y82 276 aa13.72□□□□□ -0.21
CIRBP-235ENST00000591935 TGIF2LXQ8IUE1 241 aa13.72□□□□□ -0.21
CIRBP-235ENST00000591935 OR1S2Q8NGQ3 325 aa13.72□□□□□ -0.21
CIRBP-235ENST00000591935 ST6GALNAC6Q969X2 333 aa13.72□□□□□ -0.21
CIRBP-235ENST00000591935 NOL4LQ96MY1 436 aaPredicted RBP13.72□□□□□ -0.21
CIRBP-235ENST00000591935 GPR61Q9BZJ8 451 aa13.72□□□□□ -0.21
CIRBP-235ENST00000591935 PRELID3BQ9Y3B1 194 aa13.72□□□□□ -0.21
CIRBP-235ENST00000591935 LINC01548A6NM66 108 aa13.71□□□□□ -0.21
CIRBP-235ENST00000591935 NCBP2LA6PVI3 153 aaKnown RBP13.71□□□□□ -0.21
CIRBP-235ENST00000591935 SCAF4O95104 1147 aaKnown RBP13.71□□□□□ -0.21
CIRBP-235ENST00000591935 SULT1A1P50225 295 aa13.71□□□□□ -0.21
CIRBP-235ENST00000591935 ZNF439Q8NDP4 499 aa13.71□□□□□ -0.21
CIRBP-235ENST00000591935 EAF1Q96JC9 268 aaPredicted RBP13.71□□□□□ -0.21
CIRBP-235ENST00000591935 ABHD14AQ9BUJ0 271 aa13.71□□□□□ -0.21
CIRBP-235ENST00000591935 IFI27L2Q9H2X8 130 aa13.71□□□□□ -0.21
CIRBP-235ENST00000591935 AURKAIP1Q9NWT8 199 aaPredicted RBP13.71□□□□□ -0.21
CIRBP-235ENST00000591935 HSPB7Q9UBY9 170 aa13.71□□□□□ -0.21
CIRBP-235ENST00000591935 LINC00527Q9UJ94 153 aa13.71□□□□□ -0.21
CIRBP-235ENST00000591935 RAMP3O60896 148 aa13.7□□□□□ -0.22
CIRBP-235ENST00000591935 PROP1O75360 226 aa13.7□□□□□ -0.22
CIRBP-235ENST00000591935 S1PR2O95136 353 aa13.7□□□□□ -0.22
CIRBP-235ENST00000591935 THBS3P49746 956 aa13.7□□□□□ -0.22
CIRBP-235ENST00000591935 ZNF134P52741 427 aa13.7□□□□□ -0.22
CIRBP-235ENST00000591935 PJVKQ0ZLH3 352 aa13.7□□□□□ -0.22
CIRBP-235ENST00000591935 AARDQ4LEZ3 155 aa13.7□□□□□ -0.22
CIRBP-235ENST00000591935 H2BFWTQ7Z2G1 175 aa13.7□□□□□ -0.22
CIRBP-235ENST00000591935 ODF3L1Q8IXM7 274 aa13.7□□□□□ -0.22
CIRBP-235ENST00000591935 LYPD6BQ8NI32 183 aa13.7□□□□□ -0.22
CIRBP-235ENST00000591935 GNPNAT1Q96EK6 184 aaPredicted RBP13.7□□□□□ -0.22
CIRBP-235ENST00000591935 CIB3Q96Q77 187 aaPredicted RBP13.7□□□□□ -0.22
CIRBP-235ENST00000591935 TSNAXQ99598 290 aaKnown RBP13.7□□□□□ -0.22
CIRBP-235ENST00000591935 PSENENQ9NZ42 101 aa13.7□□□□□ -0.22
CIRBP-235ENST00000591935 LINC00473A8K010 186 aa13.69□□□□□ -0.22
CIRBP-235ENST00000591935 UMAD1C9J7I0 102 aa13.69□□□□□ -0.22
CIRBP-235ENST00000591935 M0R1X1 148 aa13.69□□□□□ -0.22
CIRBP-235ENST00000591935 AP4M1O00189 453 aa13.69□□□□□ -0.22
CIRBP-235ENST00000591935 MOSP00540 346 aa13.69□□□□□ -0.22
CIRBP-235ENST00000591935 ZNF137PP52743 207 aa13.69□□□□□ -0.22
CIRBP-235ENST00000591935 TNFRSF9Q07011 255 aa13.69□□□□□ -0.22
CIRBP-235ENST00000591935 CT45A1Q5HYN5 189 aa13.69□□□□□ -0.22
CIRBP-235ENST00000591935 BTNL8Q6UX41 500 aa13.69□□□□□ -0.22
CIRBP-235ENST00000591935 SLC25A48Q6ZT89 311 aaKnown RBP13.69□□□□□ -0.22
CIRBP-235ENST00000591935 Q8N6K4 173 aa13.69□□□□□ -0.22
CIRBP-235ENST00000591935 OR5C1Q8NGR4 320 aa13.69□□□□□ -0.22
CIRBP-235ENST00000591935 CT45A3Q8NHU0 189 aa13.69□□□□□ -0.22
CIRBP-235ENST00000591935 S1PR3Q99500 378 aa13.69□□□□□ -0.22
CIRBP-235ENST00000591935 ATP5SQ99766 215 aa13.69□□□□□ -0.22
CIRBP-235ENST00000591935 KRASP01116 189 aa13.68□□□□□ -0.22
CIRBP-235ENST00000591935 G6PCP35575 357 aa13.68□□□□□ -0.22
CIRBP-235ENST00000591935 F2RL1P55085 397 aa13.68□□□□□ -0.22
CIRBP-235ENST00000591935 UBE2KP61086 200 aa13.68□□□□□ -0.22
CIRBP-235ENST00000591935 PXDC1Q5TGL8 231 aa13.68□□□□□ -0.22
CIRBP-235ENST00000591935 TEX38Q6PEX7 206 aa13.68□□□□□ -0.22
CIRBP-235ENST00000591935 C18orf65Q6ZTR6 163 aa13.68□□□□□ -0.22
CIRBP-235ENST00000591935 DDB2Q92466 427 aa13.68□□□□□ -0.22
CIRBP-235ENST00000591935 DPF1Q92782 380 aa13.68□□□□□ -0.22
CIRBP-235ENST00000591935 RASL11BQ9BPW5 248 aa13.68□□□□□ -0.22
CIRBP-235ENST00000591935 MCRIP2Q9BUT9 160 aaKnown RBP13.68□□□□□ -0.22
CIRBP-235ENST00000591935 PARD6GQ9BYG4 376 aaPredicted RBP13.68□□□□□ -0.22
CIRBP-235ENST00000591935 PLA2G2EQ9NZK7 142 aa13.68□□□□□ -0.22
CIRBP-235ENST00000591935 IFNA5P01569 189 aa13.67□□□□□ -0.22
CIRBP-235ENST00000591935 OR8U8P0C7N1 319 aa13.67□□□□□ -0.22
CIRBP-235ENST00000591935 HBG1P69891 147 aa13.67□□□□□ -0.22
CIRBP-235ENST00000591935 HBG2P69892 147 aa13.67□□□□□ -0.22
CIRBP-235ENST00000591935 ATP6V1FQ16864 119 aa13.67□□□□□ -0.22
CIRBP-235ENST00000591935 IZUMO4Q1ZYL8 232 aa13.67□□□□□ -0.22
CIRBP-235ENST00000591935 LINC00482Q8N8I6 264 aa13.67□□□□□ -0.22
CIRBP-235ENST00000591935 Q8N9W7 124 aa13.67□□□□□ -0.22
CIRBP-235ENST00000591935 OR52E5Q8NH55 327 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms