RNA–Protein interactions for RNA: ENST00000571855.1

ABCC3-218, Transcript of ATP binding cassette subfamily C member 3, human

Gene ABCC3, Length 1,562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCC3-218	ENST00000571855	SPINK9	Q5DT21	86 aa		12.84	□□□□□ -0.35
ABCC3-218	ENST00000571855	LYG2	Q86SG7	212 aa		12.84	□□□□□ -0.35
ABCC3-218	ENST00000571855	MRPL41	Q8IXM3	137 aa	Known RBP	12.84	□□□□□ -0.35
ABCC3-218	ENST00000571855	OR1N2	Q8NGR9	330 aa		12.84	□□□□□ -0.35
ABCC3-218	ENST00000571855	PDCD10	Q9BUL8	212 aa		12.84	□□□□□ -0.35
ABCC3-218	ENST00000571855	PLEKHA3	Q9HB20	300 aa		12.84	□□□□□ -0.35
ABCC3-218	ENST00000571855	IGLV11-55	A0A075B6I3	123 aa		12.83	□□□□□ -0.36
ABCC3-218	ENST00000571855	DUXB	A0A1W2PPF3	345 aa		12.83	□□□□□ -0.36
ABCC3-218	ENST00000571855	HIST1H1B	P16401	226 aa	Known RBP	12.83	□□□□□ -0.36
ABCC3-218	ENST00000571855	ATP5G2	Q06055	141 aa		12.83	□□□□□ -0.36
ABCC3-218	ENST00000571855	FHL3	Q13643	280 aa		12.83	□□□□□ -0.36
ABCC3-218	ENST00000571855	LINC00482	Q8N8I6	264 aa		12.83	□□□□□ -0.36
ABCC3-218	ENST00000571855	WFDC9	Q8NEX5	89 aa		12.83	□□□□□ -0.36
ABCC3-218	ENST00000571855	DMRT1	Q9Y5R6	373 aa		12.83	□□□□□ -0.36
ABCC3-218	ENST00000571855	DUS4L	O95620	317 aa	Known RBP	12.82	□□□□□ -0.36
ABCC3-218	ENST00000571855	SULT1A3	P0DMM9	295 aa		12.82	□□□□□ -0.36
ABCC3-218	ENST00000571855	SULT1A4	P0DMN0	295 aa		12.82	□□□□□ -0.36
ABCC3-218	ENST00000571855	ZNF616	Q08AN1	781 aa		12.82	□□□□□ -0.36
ABCC3-218	ENST00000571855	C15orf32	Q32M92	178 aa		12.82	□□□□□ -0.36
ABCC3-218	ENST00000571855	ZNF343	Q6P1L6	599 aa		12.82	□□□□□ -0.36
ABCC3-218	ENST00000571855	OR2C3	Q8N628	320 aa		12.82	□□□□□ -0.36
ABCC3-218	ENST00000571855	OR52E5	Q8NH55	327 aa		12.82	□□□□□ -0.36
ABCC3-218	ENST00000571855	ENKUR	Q8TC29	256 aa		12.82	□□□□□ -0.36
ABCC3-218	ENST00000571855	FBXL7	Q9UJT9	491 aa		12.82	□□□□□ -0.36
ABCC3-218	ENST00000571855	F11R	Q9Y624	299 aa	Known RBP	12.82	□□□□□ -0.36
ABCC3-218	ENST00000571855		A0A1B0GU03	582 aa		12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855	NDUFB8	O95169	186 aa		12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855	HSPB1	P04792	205 aa	Known RBP	12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855	H2AFB2	P0C5Z0	115 aa		12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855	SPCS3	P61009	180 aa		12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855	ERH	P84090	104 aa	Known RBP	12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855	SMCO1	Q147U7	214 aa		12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855	DPF1	Q92782	380 aa		12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855	TMED3	Q9Y3Q3	217 aa		12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855	IGHV4OR15-8	A0A075B7B6	117 aa		12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855		A0A087WW49	117 aa		12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855	ANKRD34B	A5PLL1	514 aa		12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855	INS-IGF2	F8WCM5	200 aa		12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855	CYB5B	O43169	146 aa		12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855	HOXB5	P09067	269 aa		12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855	CD33	P20138	364 aa		12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855	MFAP2	P55001	183 aa		12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855	DEFA1	P59665	94 aa		12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855	DEFA3	P59666	94 aa		12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855	PDLIM3	Q53GG5	364 aa	Predicted RBP	12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855	SLC25A24	Q6NUK1	477 aa		12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855	OR52B4	Q8NGK2	314 aa		12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855	COQ8A	Q8NI60	647 aa		12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855	RANGRF	Q9HD47	186 aa	Predicted RBP	12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855	THYN1	Q9P016	225 aa		12.81	□□□□□ -0.36
ABCC3-218	ENST00000571855	LINC01619	G3V211	115 aa		12.8	□□□□□ -0.36
ABCC3-218	ENST00000571855	HOXA1	P49639	335 aa	Predicted RBP	12.8	□□□□□ -0.36
ABCC3-218	ENST00000571855	EXOSC2	Q13868	293 aa	Known RBP	12.8	□□□□□ -0.36
ABCC3-218	ENST00000571855	NRARP	Q7Z6K4	114 aa		12.8	□□□□□ -0.36
ABCC3-218	ENST00000571855	ZNF114	Q8NC26	417 aa		12.8	□□□□□ -0.36
ABCC3-218	ENST00000571855	DUSP18	Q8NEJ0	188 aa		12.8	□□□□□ -0.36
ABCC3-218	ENST00000571855	OR1P1	Q8NH06	330 aa		12.8	□□□□□ -0.36
ABCC3-218	ENST00000571855	PEF1	Q9UBV8	284 aa	Known RBP	12.8	□□□□□ -0.36
ABCC3-218	ENST00000571855	CACFD1	Q9UGQ2	172 aa		12.8	□□□□□ -0.36
ABCC3-218	ENST00000571855	NXPH3	O95157	252 aa		12.79	□□□□□ -0.36
ABCC3-218	ENST00000571855	TRBV12-3	P01733	135 aa		12.79	□□□□□ -0.36
ABCC3-218	ENST00000571855	OR8U8	P0C7N1	319 aa		12.79	□□□□□ -0.36
ABCC3-218	ENST00000571855	SLC25A6	P12236	298 aa		12.79	□□□□□ -0.36
ABCC3-218	ENST00000571855	GGNBP1	Q5YKI7	109 aa		12.79	□□□□□ -0.36
ABCC3-218	ENST00000571855	OR1L6	Q8NGR2	347 aa		12.79	□□□□□ -0.36
ABCC3-218	ENST00000571855	MITD1	Q8WV92	249 aa		12.79	□□□□□ -0.36
ABCC3-218	ENST00000571855	ENY2	Q9NPA8	101 aa		12.79	□□□□□ -0.36
ABCC3-218	ENST00000571855	PITX3	O75364	302 aa		12.78	□□□□□ -0.36
ABCC3-218	ENST00000571855	ADAP1	O75689	374 aa		12.78	□□□□□ -0.36
ABCC3-218	ENST00000571855	SNCA	P37840	140 aa		12.78	□□□□□ -0.36
ABCC3-218	ENST00000571855	TNFRSF9	Q07011	255 aa		12.78	□□□□□ -0.36
ABCC3-218	ENST00000571855	OR1S1	Q8NH92	325 aa		12.78	□□□□□ -0.36
ABCC3-218	ENST00000571855	CXorf58	Q96LI9	332 aa		12.78	□□□□□ -0.36
ABCC3-218	ENST00000571855		S4R3C0	116 aa		12.78	□□□□□ -0.36
ABCC3-218	ENST00000571855	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	12.77	□□□□□ -0.36
ABCC3-218	ENST00000571855	MFSD2B	A6NFX1	497 aa		12.77	□□□□□ -0.36
ABCC3-218	ENST00000571855	CEBPZOS	A8MTT3	80 aa		12.77	□□□□□ -0.36
ABCC3-218	ENST00000571855	SLURP1	P55000	103 aa		12.77	□□□□□ -0.36
ABCC3-218	ENST00000571855	EEF1AKMT3	Q96AZ1	226 aa		12.77	□□□□□ -0.36
ABCC3-218	ENST00000571855	SEC22C	Q9BRL7	303 aa		12.77	□□□□□ -0.36
ABCC3-218	ENST00000571855	HSPB7	Q9UBY9	170 aa		12.77	□□□□□ -0.36
ABCC3-218	ENST00000571855	MPTX1	A8MV57	137 aa		12.77	□□□□□ -0.37
ABCC3-218	ENST00000571855	IGHV3-23	P01764	117 aa		12.77	□□□□□ -0.37
ABCC3-218	ENST00000571855	RNASE2	P10153	161 aa	Known RBP	12.77	□□□□□ -0.37
ABCC3-218	ENST00000571855	HOXD3	P31249	432 aa	Predicted RBP	12.77	□□□□□ -0.37
ABCC3-218	ENST00000571855	FAM209B	Q5JX69	171 aa		12.77	□□□□□ -0.37
ABCC3-218	ENST00000571855	VN1R17P	Q8TDU5	208 aa		12.77	□□□□□ -0.37
ABCC3-218	ENST00000571855	ZNF431	Q8TF32	576 aa	Predicted RBP	12.77	□□□□□ -0.37
ABCC3-218	ENST00000571855	RCC1L	Q96I51	464 aa	Known RBP	12.77	□□□□□ -0.37
ABCC3-218	ENST00000571855	CCDC140	Q96MF4	163 aa		12.77	□□□□□ -0.37
ABCC3-218	ENST00000571855	HEYL	Q9NQ87	328 aa	Predicted RBP	12.77	□□□□□ -0.37
ABCC3-218	ENST00000571855	TRBV7-1	A0A0A6YYK4	115 aa		12.76	□□□□□ -0.37
ABCC3-218	ENST00000571855		K7EIM0	57 aa		12.76	□□□□□ -0.37
ABCC3-218	ENST00000571855	IL5	P05113	134 aa		12.76	□□□□□ -0.37
ABCC3-218	ENST00000571855	IGLL1	P15814	213 aa		12.76	□□□□□ -0.37
ABCC3-218	ENST00000571855	ZP3	P21754	424 aa		12.76	□□□□□ -0.37
ABCC3-218	ENST00000571855	OXLD1	Q5BKU9	147 aa		12.76	□□□□□ -0.37
ABCC3-218	ENST00000571855	PLET1	Q6UQ28	207 aa		12.76	□□□□□ -0.37
ABCC3-218	ENST00000571855	DCUN1D4	Q92564	292 aa		12.76	□□□□□ -0.37
ABCC3-218	ENST00000571855	DLX4	Q92988	240 aa	Predicted RBP	12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms