RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 TMEM144Q7Z5S9 345 aa14.64□□□□□ -0.07
SMPD3-211ENST00000568373 CHODLQ9H9P2 273 aa14.64□□□□□ -0.07
SMPD3-211ENST00000568373 ONECUT1Q9UBC0 465 aa14.64□□□□□ -0.07
SMPD3-211ENST00000568373 CGB1A6NKQ9 187 aa14.63□□□□□ -0.07
SMPD3-211ENST00000568373 B4DEV8 164 aa14.63□□□□□ -0.07
SMPD3-211ENST00000568373 PAGE4O60829 102 aa14.63□□□□□ -0.07
SMPD3-211ENST00000568373 RNF212Q495C1 297 aa14.63□□□□□ -0.07
SMPD3-211ENST00000568373 C10orf55Q5SWW7 151 aa14.63□□□□□ -0.07
SMPD3-211ENST00000568373 FAM24BQ8N5W8 94 aa14.63□□□□□ -0.07
SMPD3-211ENST00000568373 OR4P4Q8NGL7 312 aa14.63□□□□□ -0.07
SMPD3-211ENST00000568373 INSIG2Q9Y5U4 225 aa14.63□□□□□ -0.07
SMPD3-211ENST00000568373 TACC2O95359 2948 aa14.63□□□□□ -0.07
SMPD3-211ENST00000568373 IGHV1-3A0A0C4DH29 117 aa14.62□□□□□ -0.07
SMPD3-211ENST00000568373 ZNF727A8MUV8 499 aa14.62□□□□□ -0.07
SMPD3-211ENST00000568373 AGAP20933 346 aa14.62□□□□□ -0.07
SMPD3-211ENST00000568373 GNLYP22749 145 aa14.62□□□□□ -0.07
SMPD3-211ENST00000568373 PRR20EP86478 221 aa14.62□□□□□ -0.07
SMPD3-211ENST00000568373 PRR20CP86479 221 aa14.62□□□□□ -0.07
SMPD3-211ENST00000568373 PRR20DP86480 221 aa14.62□□□□□ -0.07
SMPD3-211ENST00000568373 PRR20BP86481 221 aa14.62□□□□□ -0.07
SMPD3-211ENST00000568373 PRR20AP86496 221 aa14.62□□□□□ -0.07
SMPD3-211ENST00000568373 MOB3BQ86TA1 216 aa14.62□□□□□ -0.07
SMPD3-211ENST00000568373 OR4F5Q8NH21 305 aa14.62□□□□□ -0.07
SMPD3-211ENST00000568373 OR4F4Q96R69 305 aa14.62□□□□□ -0.07
SMPD3-211ENST00000568373 SDF2L1Q9HCN8 221 aa14.62□□□□□ -0.07
SMPD3-211ENST00000568373 TPSG1Q9NRR2 321 aa14.62□□□□□ -0.07
SMPD3-211ENST00000568373 AMMECR1Q9Y4X0 333 aaPredicted RBP14.62□□□□□ -0.07
SMPD3-211ENST00000568373 STAG3L2P0CL84 134 aa14.62□□□□□ -0.07
SMPD3-211ENST00000568373 STAG3L3P0CL85 134 aa14.62□□□□□ -0.07
SMPD3-211ENST00000568373 CTRB1P17538 263 aa14.62□□□□□ -0.07
SMPD3-211ENST00000568373 WT1-ASQ06250 92 aa14.62□□□□□ -0.07
SMPD3-211ENST00000568373 CD69Q07108 199 aa14.62□□□□□ -0.07
SMPD3-211ENST00000568373 GAMTQ14353 236 aa14.62□□□□□ -0.07
SMPD3-211ENST00000568373 CTRB2Q6GPI1 263 aa14.62□□□□□ -0.07
SMPD3-211ENST00000568373 YPEL4Q96NS1 127 aa14.62□□□□□ -0.07
SMPD3-211ENST00000568373 BBC3Q96PG8 261 aaPredicted RBP14.62□□□□□ -0.07
SMPD3-211ENST00000568373 NAV3Q8IVL0 2385 aa14.61□□□□□ -0.07
SMPD3-211ENST00000568373 MRGPRG-AS1Q2M3A8 158 aa14.61□□□□□ -0.07
SMPD3-211ENST00000568373 TEX45Q8NA69 505 aa14.61□□□□□ -0.07
SMPD3-211ENST00000568373 ABHD5Q8WTS1 349 aa14.61□□□□□ -0.07
SMPD3-211ENST00000568373 SMIM7Q9BQ49 75 aa14.61□□□□□ -0.07
SMPD3-211ENST00000568373 SIRT7Q9NRC8 400 aa14.61□□□□□ -0.07
SMPD3-211ENST00000568373 SLC45A2Q9UMX9 530 aa14.61□□□□□ -0.07
SMPD3-211ENST00000568373 IGKV1OR2-108A0A075B7D4 117 aa14.61□□□□□ -0.07
SMPD3-211ENST00000568373 ARL14EPLP0DKL9 152 aa14.61□□□□□ -0.07
SMPD3-211ENST00000568373 MAS1LP35410 378 aa14.61□□□□□ -0.07
SMPD3-211ENST00000568373 PNKDQ8N490 385 aa14.61□□□□□ -0.07
SMPD3-211ENST00000568373 CACNG8Q8WXS5 425 aa14.61□□□□□ -0.07
SMPD3-211ENST00000568373 RPEQ96AT9 228 aa14.61□□□□□ -0.07
SMPD3-211ENST00000568373 SSBP3Q9BWW4 388 aaPredicted RBP14.61□□□□□ -0.07
SMPD3-211ENST00000568373 C11orf94C9JXX5 98 aa14.6□□□□□ -0.07
SMPD3-211ENST00000568373 PLXNB1O43157 2135 aa14.6□□□□□ -0.07
SMPD3-211ENST00000568373 CXorf1O96002 111 aa14.6□□□□□ -0.07
SMPD3-211ENST00000568373 LINC00869P0C866 280 aa14.6□□□□□ -0.07
SMPD3-211ENST00000568373 RAB5AP20339 215 aa14.6□□□□□ -0.07
SMPD3-211ENST00000568373 RHOBP62745 196 aa14.6□□□□□ -0.07
SMPD3-211ENST00000568373 SPNS3Q6ZMD2 512 aa14.6□□□□□ -0.07
SMPD3-211ENST00000568373 NAT8Q9UHE5 227 aa14.6□□□□□ -0.07
SMPD3-211ENST00000568373 CXorf65A6NEN9 183 aa14.59□□□□□ -0.07
SMPD3-211ENST00000568373 LY6LH3BQJ8 138 aa14.59□□□□□ -0.07
SMPD3-211ENST00000568373 PRB1P04280 392 aa14.59□□□□□ -0.07
SMPD3-211ENST00000568373 GPX4P36969 197 aaPredicted RBP14.59□□□□□ -0.07
SMPD3-211ENST00000568373 MLANAQ16655 118 aa14.59□□□□□ -0.07
SMPD3-211ENST00000568373 CYP2G1PQ6ZSU1 146 aa14.59□□□□□ -0.07
SMPD3-211ENST00000568373 RPUSD4Q96CM3 377 aaKnown RBP14.59□□□□□ -0.07
SMPD3-211ENST00000568373 SEPSECSQ9HD40 501 aaKnown RBP14.59□□□□□ -0.07
SMPD3-211ENST00000568373 ARHGAP32A7KAX9 2087 aa14.59□□□□□ -0.07
SMPD3-211ENST00000568373 A0A1W2PPI3 338 aa14.59□□□□□ -0.07
SMPD3-211ENST00000568373 CRYGBP07316 175 aa14.59□□□□□ -0.07
SMPD3-211ENST00000568373 SUB1P53999 127 aaKnown RBP eCLIP14.59□□□□□ -0.07
SMPD3-211ENST00000568373 ZNF674Q2M3X9 581 aa14.59□□□□□ -0.07
SMPD3-211ENST00000568373 SLC16A13Q7RTY0 426 aa14.59□□□□□ -0.07
SMPD3-211ENST00000568373 MMD2Q8IY49 270 aa14.59□□□□□ -0.07
SMPD3-211ENST00000568373 RNASEH2CQ8TDP1 164 aaKnown RBP14.59□□□□□ -0.07
SMPD3-211ENST00000568373 PARLQ9H300 379 aa14.59□□□□□ -0.07
SMPD3-211ENST00000568373 COL12A1Q99715 3063 aa14.58□□□□□ -0.07
SMPD3-211ENST00000568373 LOC105371242A0A075B767 164 aa14.58□□□□□ -0.08
SMPD3-211ENST00000568373 CNTFRP26992 372 aa14.58□□□□□ -0.08
SMPD3-211ENST00000568373 CDKN1AP38936 164 aa14.58□□□□□ -0.08
SMPD3-211ENST00000568373 ARF6P62330 175 aa14.58□□□□□ -0.08
SMPD3-211ENST00000568373 HABP2Q14520 560 aaPredicted RBP14.58□□□□□ -0.08
SMPD3-211ENST00000568373 PRSS8Q16651 343 aa14.58□□□□□ -0.08
SMPD3-211ENST00000568373 TMEM241Q24JQ0 296 aa14.58□□□□□ -0.08
SMPD3-211ENST00000568373 CHD6Q8TD26 2715 aa14.58□□□□□ -0.08
SMPD3-211ENST00000568373 M0R1W7 72 aa14.57□□□□□ -0.08
SMPD3-211ENST00000568373 OR10J1P30954 320 aa14.57□□□□□ -0.08
SMPD3-211ENST00000568373 UBE2G2P60604 165 aa14.57□□□□□ -0.08
SMPD3-211ENST00000568373 RAB5BP61020 215 aa14.57□□□□□ -0.08
SMPD3-211ENST00000568373 PSG5Q15238 335 aa14.57□□□□□ -0.08
SMPD3-211ENST00000568373 SPATA31B1PQ5VZV4 182 aa14.57□□□□□ -0.08
SMPD3-211ENST00000568373 ZFP82Q8N141 532 aa14.57□□□□□ -0.08
SMPD3-211ENST00000568373 OR11H6Q8NGC7 330 aa14.57□□□□□ -0.08
SMPD3-211ENST00000568373 NANPQ8TBE9 248 aa14.57□□□□□ -0.08
SMPD3-211ENST00000568373 SLC35E1Q96K37 410 aa14.57□□□□□ -0.08
SMPD3-211ENST00000568373 UBTD1Q9HAC8 227 aa14.57□□□□□ -0.08
SMPD3-211ENST00000568373 SIGLEC9Q9Y336 463 aa14.57□□□□□ -0.08
SMPD3-211ENST00000568373 C1orf196B1AJZ1 125 aa14.57□□□□□ -0.08
SMPD3-211ENST00000568373 PDE6DO43924 150 aa14.57□□□□□ -0.08
SMPD3-211ENST00000568373 ACTL6BO94805 426 aa14.57□□□□□ -0.08
SMPD3-211ENST00000568373 CST9LP1Q5W188 147 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms