RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 COX5BP10606 129 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 APLNRP35414 380 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 RBM11P57052 281 aaKnown RBP3.32□□□□□ -1.88
LINC00561-201ENST00000565815 OR2B8PP59922 312 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 HBG1P69891 147 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 HBG2P69892 147 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 ATP6V1FQ16864 119 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 AKIRIN2Q53H80 203 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 NMSQ5H8A3 153 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 HIST3H2BBQ8N257 126 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 RPRMLQ8N4K4 120 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 SLC35G3Q8N808 338 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 HSD17B11Q8NBQ5 300 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 OR1F12Q8NHA8 337 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 FAM210BQ96KR6 192 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 SPACA5Q96QH8 159 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 ATP6V0BQ99437 205 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 OVOL2Q9BRP0 275 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 PYGO2Q9BRQ0 406 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 C2orf88Q9BSF0 95 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 ACTR3CQ9C0K3 210 aaPredicted RBP3.32□□□□□ -1.88
LINC00561-201ENST00000565815 VAX2Q9UIW0 290 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 CCDC168Q8NDH2 2452 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 ITPR3Q14573 2671 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 CSPG4Q6UVK1 2322 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 IGKV1D-8A0A087WSZ0 117 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 TMEM89A2RUT3 159 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 NDUFS8O00217 210 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 EFNA2O43921 213 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 NXPH2O95156 264 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 NRASP01111 189 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 CBR1P16152 277 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 AADACP22760 399 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 PPP1CCP36873 323 aaKnown RBP3.31□□□□□ -1.88
LINC00561-201ENST00000565815 MAGEA5P43359 124 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 NDUFA6P56556 154 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 HERV-K104P63124 156 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 ZNF92Q03936 586 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 ACOT6Q3I5F7 207 aaPredicted RBP3.31□□□□□ -1.88
LINC00561-201ENST00000565815 PYY3Q5JQD4 70 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 GFI1BQ5VTD9 330 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 SLC25A26Q70HW3 274 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 TMEM183AQ8IXX5 376 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 MKXQ8IYA7 352 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 SELENOHQ8IZQ5 122 aaKnown RBP3.31□□□□□ -1.88
LINC00561-201ENST00000565815 TCTEX1D1Q8N7M0 179 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 SCGB1C1Q8TD33 95 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 MRGPRDQ8TDS7 321 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 TOMM40LQ969M1 308 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 ISOC2Q96AB3 205 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 REEP6Q96HR9 211 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 IMMP2LQ96T52 175 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 TXNDC17Q9BRA2 123 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 ULBP2Q9BZM5 246 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 BCL2L14Q9BZR8 327 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 SH2D2AQ9NP31 389 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 PLEK2Q9NYT0 353 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 NAT8Q9UHE5 227 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 SETD2Q9BYW2 2564 aaPredicted RBP3.31□□□□□ -1.88
LINC00561-201ENST00000565815 EXPH5Q8NEV8 1989 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 RAI1Q7Z5J4 1906 aaPredicted RBP3.31□□□□□ -1.88
LINC00561-201ENST00000565815 MPDZO75970 2070 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 hCG_38984A0A1B0GV85 526 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 IGSF23A1L1A6 192 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 H0YL77 283 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 DEGS1O15121 323 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 HIST1H2BKO60814 126 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 VENTXO95231 258 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 NAPSAO96009 420 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 ARG1P05089 322 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 HIST1H2BJP06899 126 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 RAB4AP20338 218 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 HIST1H2BOP23527 126 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 DDTP30046 118 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 HIST1H2BBP33778 126 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 GPX4P36969 197 aaPredicted RBP3.31□□□□□ -1.88
LINC00561-201ENST00000565815 SRP14P37108 136 aaKnown RBP3.31□□□□□ -1.88
LINC00561-201ENST00000565815 MDH2P40926 338 aaKnown RBP3.31□□□□□ -1.88
LINC00561-201ENST00000565815 HIST1H2BDP58876 126 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 TAS2R60P59551 318 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 HIST1H2BCP62807 126 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 JOSD1Q15040 202 aaPredicted RBP3.31□□□□□ -1.88
LINC00561-201ENST00000565815 HIST2H2BEQ16778 126 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 TMEM249Q2WGJ8 235 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.31□□□□□ -1.88
LINC00561-201ENST00000565815 OTPQ5XKR4 325 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 CLEC2AQ6UVW9 174 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 CYP2G1PQ6ZSU1 146 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 SSX9Q7RTT3 188 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 WDFY1Q8IWB7 410 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 OR10AD1Q8NGE0 317 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 OR10A7Q8NGE5 316 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 OR52M1Q8NGK5 317 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 OR5C1Q8NGR4 320 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 Q8WTZ3 238 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 HIST1H2BHQ93079 126 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 HIST1H2BNQ99877 126 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 HIST1H2BMQ99879 126 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 FAAP24Q9BTP7 215 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 MANBALQ9NQG1 85 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms