RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 PBDC1Q9BVG4 233 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 TMEM147Q9BVK8 224 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 CHODLQ9H9P2 273 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 TREM1Q9NP99 234 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 ENY2Q9NPA8 101 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 SLC35D1Q9NTN3 355 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 UQCC1Q9NVA1 299 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 FOXA2Q9Y261 457 aaPredicted RBP3.6□□□□□ -1.83
SRP54-212ENST00000556992 ZNF257Q9Y2Q1 563 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 FBXO7Q9Y3I1 522 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 TIMM9Q9Y5J7 89 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 C2CD3Q4AC94 2353 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 DNAJC13O75165 2243 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 LOC105371242A0A075B767 164 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 A6NNC1 897 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 C17orf112F2Z3M2 114 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 H3BP45 60 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 MPDU1O75352 247 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 CD5P06127 495 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 SOD3P08294 240 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 OR9G9P0C7N8 305 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 CEACAM3P40198 252 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 VDAC2P45880 294 aaPredicted RBP3.59□□□□□ -1.83
SRP54-212ENST00000556992 RAB13P51153 203 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 ZNF137PP52743 207 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 RPS16P62249 146 aaKnown RBP3.59□□□□□ -1.83
SRP54-212ENST00000556992 ZNF616Q08AN1 781 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 TMEM267Q0VDI3 215 aaPredicted RBP3.59□□□□□ -1.83
SRP54-212ENST00000556992 RAB31Q13636 194 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 FHL3Q13643 280 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 VWC2Q2TAL6 325 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 KHDC1LQ5JSQ8 128 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 WDR25Q64LD2 544 aaPredicted RBP3.59□□□□□ -1.83
SRP54-212ENST00000556992 OR8G2PQ6IF36 304 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 OR4A47Q6IF82 309 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 C11orf71Q6IPW1 123 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 TMEM182Q6ZP80 229 aaPredicted RBP3.59□□□□□ -1.83
SRP54-212ENST00000556992 Q6ZRG5 221 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 SSX9Q7RTT3 188 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 PDPNQ86YL7 162 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 TGIF2LXQ8IUE1 241 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 C11orf42Q8N5U0 333 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 ZNF525Q8N782 197 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 OR5B3Q8NH48 314 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 FAM213BQ8TBF2 198 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 SFT2D1Q8WV19 159 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 TAF15Q92804 592 aaKnown RBP eCLIP3.59□□□□□ -1.83
SRP54-212ENST00000556992 ST6GALNAC6Q969X2 333 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 RBMXL1Q96E39 390 aaKnown RBP3.59□□□□□ -1.83
SRP54-212ENST00000556992 NARS2Q96I59 477 aaKnown RBP3.59□□□□□ -1.83
SRP54-212ENST00000556992 LINC00052Q96N35 136 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 RNF5Q99942 180 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 CLEC7AQ9BXN2 247 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 WDR61Q9GZS3 305 aaKnown RBP3.59□□□□□ -1.83
SRP54-212ENST00000556992 EIF5A2Q9GZV4 153 aaKnown RBP3.59□□□□□ -1.83
SRP54-212ENST00000556992 SH3BGRL3Q9H299 93 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 PATZ1Q9HBE1 687 aaKnown RBP3.59□□□□□ -1.83
SRP54-212ENST00000556992 TMEM14BQ9NUH8 114 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 BET1LQ9NYM9 111 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 CTSZQ9UBR2 303 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 WASHC3Q9Y3C0 194 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 AMMECR1Q9Y4X0 333 aaPredicted RBP3.59□□□□□ -1.83
SRP54-212ENST00000556992 OR51B2Q9Y5P1 312 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 INSIG2Q9Y5U4 225 aa3.59□□□□□ -1.83
SRP54-212ENST00000556992 NIPBLQ6KC79 2804 aaeCLIP3.59□□□□□ -1.84
SRP54-212ENST00000556992 POLEQ07864 2286 aa3.59□□□□□ -1.84
SRP54-212ENST00000556992 TNRC6AQ8NDV7 1962 aaKnown RBP3.58□□□□□ -1.84
SRP54-212ENST00000556992 CSMD2Q7Z408 3487 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 TEX50A0A1B0GTY4 177 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 RBFOX3A6NFN3 312 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 C15orf61A6NNL5 157 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 FNDC10F2Z333 226 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 F8W036 122 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 INS-IGF2F8WCM5 200 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 H0YJW9 148 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 BUB1B-PAK6H3BSN5 160 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 M0R1W7 72 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 AGPAT2O15120 278 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 CYB5BO43169 146 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 ENSAO43768 121 aaKnown RBP3.58□□□□□ -1.84
SRP54-212ENST00000556992 FCN3O75636 299 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 TSPAN9O75954 239 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 IGLV1-47P01700 117 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 APOC3P02656 99 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 IFNA4P05014 189 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 IGFBP2P18065 325 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 USF1P22415 310 aaPredicted RBP3.58□□□□□ -1.84
SRP54-212ENST00000556992 PRTN3P24158 256 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 CD1BP29016 333 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 MAS1LP35410 378 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 SNCAP37840 140 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 GPR6P46095 362 aaPredicted RBP3.58□□□□□ -1.84
SRP54-212ENST00000556992 UQCRFS1P47985 274 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 HOXA1P49639 335 aaPredicted RBP3.58□□□□□ -1.84
SRP54-212ENST00000556992 SUB1P53999 127 aaKnown RBP eCLIP3.58□□□□□ -1.84
SRP54-212ENST00000556992 OR2B8PP59922 312 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 RPL8P62917 257 aaKnown RBP3.58□□□□□ -1.84
SRP54-212ENST00000556992 DLK1P80370 383 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 ERHP84090 104 aaKnown RBP3.58□□□□□ -1.84
SRP54-212ENST00000556992 DEFA5Q01523 94 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms