RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 TNFRSF19Q9NS68 423 aa7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 COL8A1P27658 744 aa7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 SUPT4H1P63272 117 aaKnown RBP7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 TMEM171Q8WVE6 324 aa7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 UCN2Q96RP3 112 aa7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 KDM3BQ7LBC6 1761 aa7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 IL11P20809 199 aa7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 NEGR1Q7Z3B1 354 aa7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 GJC3Q8NFK1 279 aa7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 M0R135 149 aa7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 IL9P15248 144 aa7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 SPEM1Q8N4L4 309 aa7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 ZNF799Q96GE5 643 aa7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 MTCL1Q9Y4B5 1905 aaKnown RBP7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 TRAV13-1A0A0B4J241 112 aa7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 FOXC1Q12948 553 aa7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 CST6Q15828 149 aa7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 LINC00173Q6ZV60 143 aa7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 C10orf105Q8TEF2 133 aa7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 SPATA25Q9BR10 227 aa7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 C1RLQ9NZP8 487 aa7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 RNF114Q9Y508 228 aa7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 A0A1W2PQU0 124 aa7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 S100A4P26447 101 aaKnown RBP7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 PRNTQ86SH4 94 aa7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 LAMB1P07942 1786 aa7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 OOSP1A8MZH6 123 aa7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 IGHV4-34P06331 123 aa7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 CX3CL1P78423 397 aa7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 CIRBPQ14011 172 aaKnown RBP7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 MYOZ3Q8TDC0 251 aa7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 TRIP12Q14669 1992 aaPredicted RBP7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 RGPD8O14715 1765 aaPredicted RBP7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 TNFSF14O43557 240 aa7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 BRI3O95415 125 aa7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 FAM53BQ14153 422 aa7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 PPP1R32Q7Z5V6 425 aa7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 NRGNQ92686 78 aa7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 ZNF488Q96MN9 340 aa7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 IZUMO1RA6ND01 250 aa7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 ALKAL1Q6UXT8 129 aa7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 SP7Q8TDD2 431 aaPredicted RBP7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 PDFQ9HBH1 243 aa7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 IGKV6D-21A0A0A0MT36 114 aa7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 TRAV41A0A0B4J266 112 aa7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 EPPINO95925 133 aa7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 DRD3P35462 400 aa7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 HIST1H4AP62805 103 aaKnown RBP7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 HBBP68871 147 aa7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 C16orf47Q6ZP98 133 aaPredicted RBP7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 RNF152Q8N8N0 203 aa7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 PATE1Q8WXA2 126 aa7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 KLK5Q9Y337 293 aaPredicted RBP7.55□□□□□ -1.2
GTF2A1-203ENST00000553612 TRBV5-5A0A0J9YX44 114 aa7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 CT62P0C5K7 136 aa7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 NTF4P34130 210 aa7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 CIARTQ8N365 385 aaPredicted RBP7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 BAALCQ8WXS3 180 aa7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 DEPPQ9NTK1 212 aa7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 DNAJB12Q9NXW2 375 aaKnown RBP7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 SSUH2Q9Y2M2 353 aa7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 HIGD1CA8MV81 97 aa7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 FKBP1CQ5VVH2 108 aa7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 S1PR5Q9H228 398 aa7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 FAM236DA0A1B0GTK5 79 aa7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 IGLC6P0CF74 106 aa7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 FAM236CP0DP71 79 aa7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 NOVP48745 357 aa7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 KIAA1549Q9HCM3 1950 aa7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 MED1Q15648 1581 aaPredicted RBP7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 LYZL6O75951 148 aa7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 TNFP01375 233 aa7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 PLGLB1Q02325 96 aa7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 RNF144BQ7Z419 303 aa7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 PRR7Q8TB68 274 aa7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 DNAJC30Q96LL9 226 aa7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 ZNF318Q5VUA4 2279 aa7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 SCTP09683 121 aa7.54□□□□□ -1.2
GTF2A1-203ENST00000553612 COL22A1Q8NFW1 1626 aaPredicted RBP7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 ARHGEF17Q96PE2 2063 aaPredicted RBP7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 ZNF785A8K8V0 405 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 LGALS4P56470 323 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 TWIST1Q15672 202 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 A0A0A6YYD5 115 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 CSRP3P50461 194 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 OR4F17Q8NGA8 305 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 NKX2-2O95096 273 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 SSR4P51571 173 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 DLX1P56177 255 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 FOXI2Q6ZQN5 318 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 DTX2Q86UW9 622 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 PCP2Q8IVA1 136 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 C16orf52Q8NHV5 167 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 SCRT2Q9NQ03 307 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 POLR2AP24928 1970 aaKnown RBP7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 BCORQ6W2J9 1755 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 NDUFC2O95298 119 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 FRMD6-AS1P0C7T7 363 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 PRDX2P32119 198 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 FNDC7Q5VTL7 733 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms