RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 ST8SIA3O43173 380 aa9.2□□□□□ -0.94
VPS29-211ENST00000553128 IGHV3-48P01763 117 aa9.2□□□□□ -0.94
VPS29-211ENST00000553128 GNAO1P09471 354 aa9.2□□□□□ -0.94
VPS29-211ENST00000553128 TRAPPC2P0DI81 140 aa9.2□□□□□ -0.94
VPS29-211ENST00000553128 TRAPPC2BP0DI82 140 aa9.2□□□□□ -0.94
VPS29-211ENST00000553128 SPP1P10451 314 aa9.2□□□□□ -0.94
VPS29-211ENST00000553128 GADD45AP24522 165 aa9.2□□□□□ -0.94
VPS29-211ENST00000553128 RPS25P62851 125 aaKnown RBP9.2□□□□□ -0.94
VPS29-211ENST00000553128 RELQ04864 619 aaPredicted RBP9.2□□□□□ -0.94
VPS29-211ENST00000553128 POU2AF1Q16633 256 aa9.2□□□□□ -0.94
VPS29-211ENST00000553128 MORN3Q6PF18 240 aaPredicted RBP9.2□□□□□ -0.94
VPS29-211ENST00000553128 BPIFB6Q8NFQ5 453 aa9.2□□□□□ -0.94
VPS29-211ENST00000553128 FKBP14Q9NWM8 211 aa9.2□□□□□ -0.94
VPS29-211ENST00000553128 RABAC1Q9UI14 185 aa9.2□□□□□ -0.94
VPS29-211ENST00000553128 CYB5BO43169 146 aa9.19□□□□□ -0.94
VPS29-211ENST00000553128 DTYMKP23919 212 aa9.19□□□□□ -0.94
VPS29-211ENST00000553128 CALRP27797 417 aaKnown RBP9.19□□□□□ -0.94
VPS29-211ENST00000553128 TAS2R31P59538 309 aa9.19□□□□□ -0.94
VPS29-211ENST00000553128 RPL11P62913 178 aaKnown RBP9.19□□□□□ -0.94
VPS29-211ENST00000553128 SSX1Q16384 188 aa9.19□□□□□ -0.94
VPS29-211ENST00000553128 RNF212Q495C1 297 aa9.19□□□□□ -0.94
VPS29-211ENST00000553128 TMEM41BQ5BJD5 291 aa9.19□□□□□ -0.94
VPS29-211ENST00000553128 UBE2UQ5VVX9 321 aa9.19□□□□□ -0.94
VPS29-211ENST00000553128 PQLC1Q8N2U9 271 aa9.19□□□□□ -0.94
VPS29-211ENST00000553128 SECTM1Q8WVN6 248 aa9.19□□□□□ -0.94
VPS29-211ENST00000553128 HINT2Q9BX68 163 aa9.19□□□□□ -0.94
VPS29-211ENST00000553128 NXF2Q9GZY0 626 aaKnown RBP9.19□□□□□ -0.94
VPS29-211ENST00000553128 NDUFA4L2Q9NRX3 87 aa9.19□□□□□ -0.94
VPS29-211ENST00000553128 V9GY05 133 aa9.19□□□□□ -0.94
VPS29-211ENST00000553128 CTXN2P0C2S0 81 aa9.18□□□□□ -0.94
VPS29-211ENST00000553128 ZNF688P0C7X2 276 aa9.18□□□□□ -0.94
VPS29-211ENST00000553128 PTHLHP12272 177 aa9.18□□□□□ -0.94
VPS29-211ENST00000553128 NQO2P16083 231 aa9.18□□□□□ -0.94
VPS29-211ENST00000553128 NPY1RP25929 384 aa9.18□□□□□ -0.94
VPS29-211ENST00000553128 OR10A3P58181 314 aa9.18□□□□□ -0.94
VPS29-211ENST00000553128 ACTL10Q5JWF8 245 aa9.18□□□□□ -0.94
VPS29-211ENST00000553128 TOMM20LQ6UXN7 152 aa9.18□□□□□ -0.94
VPS29-211ENST00000553128 DMBX1Q8NFW5 382 aa9.18□□□□□ -0.94
VPS29-211ENST00000553128 NUDCD2Q8WVJ2 157 aa9.18□□□□□ -0.94
VPS29-211ENST00000553128 CENPOQ9BU64 300 aa9.18□□□□□ -0.94
VPS29-211ENST00000553128 MND1Q9BWT6 205 aa9.18□□□□□ -0.94
VPS29-211ENST00000553128 DCSTAMPQ9H295 470 aa9.18□□□□□ -0.94
VPS29-211ENST00000553128 S100A14Q9HCY8 104 aa9.18□□□□□ -0.94
VPS29-211ENST00000553128 NSG2Q9Y328 171 aa9.18□□□□□ -0.94
VPS29-211ENST00000553128 TRAV2A0A0B4J234 112 aa9.17□□□□□ -0.94
VPS29-211ENST00000553128 I3L2K1 104 aa9.17□□□□□ -0.94
VPS29-211ENST00000553128 K7EQG2 157 aa9.17□□□□□ -0.94
VPS29-211ENST00000553128 RBFOX2O43251 390 aaKnown RBP eCLIP9.17□□□□□ -0.94
VPS29-211ENST00000553128 ATP5HO75947 161 aa9.17□□□□□ -0.94
VPS29-211ENST00000553128 HPRT1P00492 218 aa9.17□□□□□ -0.94
VPS29-211ENST00000553128 EMP1P54849 157 aa9.17□□□□□ -0.94
VPS29-211ENST00000553128 SPHARQ15513 63 aa9.17□□□□□ -0.94
VPS29-211ENST00000553128 CDNFQ49AH0 187 aa9.17□□□□□ -0.94
VPS29-211ENST00000553128 CNIH2Q6PI25 160 aa9.17□□□□□ -0.94
VPS29-211ENST00000553128 ZNF367Q7RTV3 350 aa9.17□□□□□ -0.94
VPS29-211ENST00000553128 SPATA12Q7Z6I5 190 aa9.17□□□□□ -0.94
VPS29-211ENST00000553128 DUSP18Q8NEJ0 188 aa9.17□□□□□ -0.94
VPS29-211ENST00000553128 OR1L8Q8NGR8 309 aa9.17□□□□□ -0.94
VPS29-211ENST00000553128 SLC25A46Q96AG3 418 aa9.17□□□□□ -0.94
VPS29-211ENST00000553128 PLCXD1Q9NUJ7 323 aa9.17□□□□□ -0.94
VPS29-211ENST00000553128 DBX1A6NMT0 343 aa9.16□□□□□ -0.94
VPS29-211ENST00000553128 SSX5O60225 188 aa9.16□□□□□ -0.94
VPS29-211ENST00000553128 EIF4EP06730 217 aaKnown RBP9.16□□□□□ -0.94
VPS29-211ENST00000553128 THOC7Q6I9Y2 204 aaKnown RBP9.16□□□□□ -0.94
VPS29-211ENST00000553128 HSD17B13Q7Z5P4 300 aaPredicted RBP9.16□□□□□ -0.94
VPS29-211ENST00000553128 STXBP6Q8NFX7 210 aa9.16□□□□□ -0.94
VPS29-211ENST00000553128 OR51H1Q8NH63 302 aa9.16□□□□□ -0.94
VPS29-211ENST00000553128 UFD1Q92890 307 aa9.16□□□□□ -0.94
VPS29-211ENST00000553128 LSM10Q969L4 123 aaKnown RBP9.16□□□□□ -0.94
VPS29-211ENST00000553128 AIFM2Q9BRQ8 373 aa9.16□□□□□ -0.94
VPS29-211ENST00000553128 ZFAND3Q9H8U3 227 aa9.16□□□□□ -0.94
VPS29-211ENST00000553128 TMEM235A6NFC5 223 aa9.15□□□□□ -0.94
VPS29-211ENST00000553128 ARL6IP5O75915 188 aa9.15□□□□□ -0.94
VPS29-211ENST00000553128 CD5P06127 495 aa9.15□□□□□ -0.94
VPS29-211ENST00000553128 FGF2P09038 288 aa9.15□□□□□ -0.94
VPS29-211ENST00000553128 INAFM2P0DMQ5 153 aa9.15□□□□□ -0.94
VPS29-211ENST00000553128 HTN3P15516 51 aa9.15□□□□□ -0.94
VPS29-211ENST00000553128 RAB6AP20340 208 aa9.15□□□□□ -0.94
VPS29-211ENST00000553128 MFAP4P55083 255 aa9.15□□□□□ -0.94
VPS29-211ENST00000553128 KRTAP10-2P60368 255 aa9.15□□□□□ -0.94
VPS29-211ENST00000553128 FABP5Q01469 135 aa9.15□□□□□ -0.94
VPS29-211ENST00000553128 HACD4Q5VWC8 232 aa9.15□□□□□ -0.94
VPS29-211ENST00000553128 C6orf223Q8N319 242 aa9.15□□□□□ -0.94
VPS29-211ENST00000553128 OR13F1Q8NGS4 319 aa9.15□□□□□ -0.94
VPS29-211ENST00000553128 DCANP1Q8TF63 244 aa9.15□□□□□ -0.94
VPS29-211ENST00000553128 MISP3Q96FF7 219 aa9.15□□□□□ -0.94
VPS29-211ENST00000553128 ATG5Q9H1Y0 275 aa9.15□□□□□ -0.94
VPS29-211ENST00000553128 XCL2Q9UBD3 114 aa9.15□□□□□ -0.94
VPS29-211ENST00000553128 ANXA10Q9UJ72 324 aa9.15□□□□□ -0.94
VPS29-211ENST00000553128 OR51B2Q9Y5P1 312 aa9.15□□□□□ -0.94
VPS29-211ENST00000553128 A0A1B0GU03 582 aa9.14□□□□□ -0.95
VPS29-211ENST00000553128 EPM2AB3EWF7 344 aa9.14□□□□□ -0.95
VPS29-211ENST00000553128 MT-CO2P00403 227 aa9.14□□□□□ -0.95
VPS29-211ENST00000553128 SPART-AS1P0CW21 52 aa9.14□□□□□ -0.95
VPS29-211ENST00000553128 FCGR2CP31995 323 aa9.14□□□□□ -0.95
VPS29-211ENST00000553128 TMEM88Q6PEY1 159 aa9.14□□□□□ -0.95
VPS29-211ENST00000553128 ZNF818PQ6ZRF7 136 aa9.14□□□□□ -0.95
VPS29-211ENST00000553128 C8orf59Q8N0T1 100 aaPredicted RBP9.14□□□□□ -0.95
VPS29-211ENST00000553128 DHRSXQ8N5I4 330 aa9.14□□□□□ -0.95
VPS29-211ENST00000553128 OR1P1Q8NH06 330 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms