RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, human

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TGFBR1-208	ENST00000550253	SNHG12	Q9BXW3	62 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	MED28	Q9H204	178 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	SLC2A9	Q9NRM0	540 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	RBFOX1	Q9NWB1	397 aa	Known RBP	4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	ZFP92	A6NM28	416 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	RPL36A-HNRNPH2	H7BZ11	118 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	BCL2L11	O43521	198 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	HPRT1	P00492	218 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	SERPINA1	P01009	418 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	OR5H8	P0DN80	308 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	AKR1C3	P42330	323 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	NCS1	P62166	190 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	MAPK14	Q16539	360 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	TSPO2	Q5TGU0	170 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	TEX43	Q6ZNM6	134 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	TMPPE	Q6ZT21	453 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	TMED4	Q7Z7H5	227 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	CBR4	Q8N4T8	237 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	COX18	Q8N8Q8	333 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	ZIC4	Q8N9L1	334 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	OR5D16	Q8NGK9	328 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	COQ8A	Q8NI60	647 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	TMEM230	Q96A57	120 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	FAM3D	Q96BQ1	224 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	CPNE2	Q96FN4	548 aa	Predicted RBP	4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	S100A13	Q99584	98 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	SUCNR1	Q9BXA5	334 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	SYT4	Q9H2B2	425 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	METTL17	Q9H7H0	456 aa	Predicted RBP	4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	RHOF	Q9HBH0	211 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	SLC7A10	Q9NS82	523 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	CA10	Q9NS85	328 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253	ZNF107	Q9UII5	783 aa	Predicted RBP	4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253		V9GYY9	64 aa		4.36	□□□□□ -1.71
TGFBR1-208	ENST00000550253		A0A087WUJ7	227 aa		4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	C7orf66	A4D0T2	115 aa		4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	GABRP	O00591	440 aa		4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	RP2	O75695	350 aa		4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	C1QC	P02747	245 aa		4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	OR4A8	P0C604	315 aa		4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	SRP14	P37108	136 aa	Known RBP	4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	PPOX	P50336	477 aa		4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	RPL14	P50914	215 aa	Known RBP	4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	OR2B8P	P59922	312 aa		4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	H3F3A	P84243	136 aa		4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	PITPNA	Q00169	270 aa		4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	C9orf129	Q5T035	196 aa	Known RBP	4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	TMEM144	Q7Z5S9	345 aa		4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	HMGN2P46	Q86SG4	172 aa		4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	LINC01551	Q86U37	167 aa		4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	OAF	Q86UD1	273 aa		4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	C14orf178	Q8N769	122 aa	Predicted RBP	4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	C3orf56	Q8N813	242 aa		4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	CYB561A3	Q8NBI2	242 aa		4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	PXT1	Q8NFP0	134 aa		4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	OR13C8	Q8NGS7	320 aa		4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	OR5W2	Q8NH69	310 aa		4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	OR1S1	Q8NH92	325 aa		4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	SGMS2	Q8NHU3	365 aa		4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	RNF133	Q8WVZ7	376 aa		4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	SEC11C	Q9BY50	192 aa		4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	TPRKB	Q9Y3C4	175 aa		4.35	□□□□□ -1.71
TGFBR1-208	ENST00000550253	NUP214	P35658	2090 aa	Predicted RBP	4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	MEIKIN	A0A087WXM9	373 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253		A0A096LPI6	279 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	CXCR6	O00574	342 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	OR2T1	O43869	369 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	MRPL33	O75394	65 aa	Known RBP	4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	CA11	O75493	328 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	MMP23A	O75900	390 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	CFD	P00746	253 aa	Predicted RBP	4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	CST4	P01036	141 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	OR10J4	P0C629	311 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	CECR9	P0C854	216 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	F2R	P25116	425 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	IDH2	P48735	452 aa	Known RBP	4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	FUT5	Q11128	374 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	RAB31	Q13636	194 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	PTGES3	Q15185	160 aa	Known RBP	4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	TNXA	Q16473	311 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	TMEM241	Q24JQ0	296 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	MEST	Q5EB52	335 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	GCSAML	Q5JQS6	135 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	COL5A1-AS1	Q5SY13	56 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	S100A7A	Q86SG5	101 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	HS3ST5	Q8IZT8	346 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	OR6N2	Q8NGY6	317 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	OR4S2	Q8NH73	311 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	OR5AK3P	Q8NH89	298 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	OR51E1	Q8TCB6	317 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	LGALS14	Q8TCE9	139 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	RNASEH2C	Q8TDP1	164 aa	Known RBP	4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	PPCDC	Q96CD2	204 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	SCGB3A2	Q96PL1	93 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	OR7D2	Q96RA2	312 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	SDF2	Q99470	211 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	ABCG5	Q9H222	651 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	WDR55	Q9H6Y2	383 aa	Predicted RBP	4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	FBXL3	Q9UKT7	428 aa		4.34	□□□□□ -1.71
TGFBR1-208	ENST00000550253	RBM7	Q9Y580	266 aa	Known RBP	4.34	□□□□□ -1.71

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