RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 C15orf61A6NNL5 157 aa10.64□□□□□ -0.71
TROAP-203ENST00000546735 NDUFA4O00483 81 aa10.64□□□□□ -0.71
TROAP-203ENST00000546735 VBP1P61758 197 aa10.64□□□□□ -0.71
TROAP-203ENST00000546735 TSPAN5P62079 268 aa10.64□□□□□ -0.71
TROAP-203ENST00000546735 TBC1D26Q86UD7 250 aa10.64□□□□□ -0.71
TROAP-203ENST00000546735 SLC38A6Q8IZM9 456 aa10.64□□□□□ -0.71
TROAP-203ENST00000546735 ZNF414Q96IQ9 312 aa10.64□□□□□ -0.71
TROAP-203ENST00000546735 SPAG8Q99932 426 aaPredicted RBP10.64□□□□□ -0.71
TROAP-203ENST00000546735 VCX3AQ9NNX9 186 aa10.64□□□□□ -0.71
TROAP-203ENST00000546735 DAZ1Q9NQZ3 744 aaKnown RBP10.64□□□□□ -0.71
TROAP-203ENST00000546735 PRNDQ9UKY0 176 aa10.64□□□□□ -0.71
TROAP-203ENST00000546735 TSPAN4O14817 238 aa10.63□□□□□ -0.71
TROAP-203ENST00000546735 IGKV1-39P01597 117 aa10.63□□□□□ -0.71
TROAP-203ENST00000546735 IGKV1D-39P04432 117 aa10.63□□□□□ -0.71
TROAP-203ENST00000546735 EWSR1Q01844 656 aaKnown RBP eCLIP10.63□□□□□ -0.71
TROAP-203ENST00000546735 ODF3L2Q3SX64 289 aa10.63□□□□□ -0.71
TROAP-203ENST00000546735 RNASE12Q5GAN4 147 aaKnown RBP10.63□□□□□ -0.71
TROAP-203ENST00000546735 LAMTOR1Q6IAA8 161 aa10.63□□□□□ -0.71
TROAP-203ENST00000546735 OR5B3Q8NH48 314 aa10.63□□□□□ -0.71
TROAP-203ENST00000546735 TMEM56Q96MV1 263 aa10.63□□□□□ -0.71
TROAP-203ENST00000546735 FUNDC2Q9BWH2 189 aa10.63□□□□□ -0.71
TROAP-203ENST00000546735 TMEM14BQ9NUH8 114 aa10.63□□□□□ -0.71
TROAP-203ENST00000546735 IGHV3-49A0A0A0MS15 119 aa10.62□□□□□ -0.71
TROAP-203ENST00000546735 M0QYG6 137 aa10.62□□□□□ -0.71
TROAP-203ENST00000546735 HPGDSO60760 199 aa10.62□□□□□ -0.71
TROAP-203ENST00000546735 TNFAIP8O95379 198 aa10.62□□□□□ -0.71
TROAP-203ENST00000546735 IGHV3-48P01763 117 aa10.62□□□□□ -0.71
TROAP-203ENST00000546735 CTSDP07339 412 aaPredicted RBP10.62□□□□□ -0.71
TROAP-203ENST00000546735 CTSGP08311 255 aa10.62□□□□□ -0.71
TROAP-203ENST00000546735 ELK1P19419 428 aa10.62□□□□□ -0.71
TROAP-203ENST00000546735 PMS2P11Q13670 270 aa10.62□□□□□ -0.71
TROAP-203ENST00000546735 DEFB135Q30KP9 77 aa10.62□□□□□ -0.71
TROAP-203ENST00000546735 SPSB3Q6PJ21 355 aa10.62□□□□□ -0.71
TROAP-203ENST00000546735 CADM3Q8N126 398 aa10.62□□□□□ -0.71
TROAP-203ENST00000546735 MRGPRFQ96AM1 343 aa10.62□□□□□ -0.71
TROAP-203ENST00000546735 MISP3Q96FF7 219 aa10.62□□□□□ -0.71
TROAP-203ENST00000546735 SEC22AQ96IW7 307 aa10.62□□□□□ -0.71
TROAP-203ENST00000546735 TSC22D3Q99576 134 aa10.62□□□□□ -0.71
TROAP-203ENST00000546735 FKBP11Q9NYL4 201 aa10.62□□□□□ -0.71
TROAP-203ENST00000546735 A0A0J9YWU9 116 aa10.61□□□□□ -0.71
TROAP-203ENST00000546735 SMIM31A0A1B0GVY4 71 aa10.61□□□□□ -0.71
TROAP-203ENST00000546735 APOA1P02647 267 aa10.61□□□□□ -0.71
TROAP-203ENST00000546735 RPL35AP18077 110 aaKnown RBP10.61□□□□□ -0.71
TROAP-203ENST00000546735 IZUMO4Q1ZYL8 232 aa10.61□□□□□ -0.71
TROAP-203ENST00000546735 SPINK9Q5DT21 86 aa10.61□□□□□ -0.71
TROAP-203ENST00000546735 LPCAT3Q6P1A2 487 aa10.61□□□□□ -0.71
TROAP-203ENST00000546735 H2BFWTQ7Z2G1 175 aa10.61□□□□□ -0.71
TROAP-203ENST00000546735 OR1P1Q8NH06 330 aa10.61□□□□□ -0.71
TROAP-203ENST00000546735 OR4A16Q8NH70 328 aa10.61□□□□□ -0.71
TROAP-203ENST00000546735 RNF2Q99496 336 aa10.61□□□□□ -0.71
TROAP-203ENST00000546735 SCPEP1Q9HB40 452 aa10.61□□□□□ -0.71
TROAP-203ENST00000546735 IGKV3-7A0A075B6H7 116 aa10.6□□□□□ -0.71
TROAP-203ENST00000546735 IGHV3OR16-13A0A075B7E8 117 aa10.6□□□□□ -0.71
TROAP-203ENST00000546735 IGHV3-74A0A0B4J1X5 117 aa10.6□□□□□ -0.71
TROAP-203ENST00000546735 OR4C46A6NHA9 309 aa10.6□□□□□ -0.71
TROAP-203ENST00000546735 I3L2K1 104 aa10.6□□□□□ -0.71
TROAP-203ENST00000546735 K7EMT4 169 aa10.6□□□□□ -0.71
TROAP-203ENST00000546735 SPRY2O43597 315 aa10.6□□□□□ -0.71
TROAP-203ENST00000546735 YIF1AO95070 293 aa10.6□□□□□ -0.71
TROAP-203ENST00000546735 PI3P19957 117 aa10.6□□□□□ -0.71
TROAP-203ENST00000546735 S100GP29377 79 aa10.6□□□□□ -0.71
TROAP-203ENST00000546735 RCVRNP35243 200 aa10.6□□□□□ -0.71
TROAP-203ENST00000546735 TFPI2P48307 235 aa10.6□□□□□ -0.71
TROAP-203ENST00000546735 APOC4P55056 127 aa10.6□□□□□ -0.71
TROAP-203ENST00000546735 ZNF124Q15973 351 aa10.6□□□□□ -0.71
TROAP-203ENST00000546735 APRG1Q8IVJ8 170 aa10.6□□□□□ -0.71
TROAP-203ENST00000546735 PINX1Q96BK5 328 aaKnown RBP10.6□□□□□ -0.71
TROAP-203ENST00000546735 ATP6V0BQ99437 205 aa10.6□□□□□ -0.71
TROAP-203ENST00000546735 SMPXQ9UHP9 88 aa10.6□□□□□ -0.71
TROAP-203ENST00000546735 IGHV7-4-1A0A0J9YVY3 117 aa10.59□□□□□ -0.71
TROAP-203ENST00000546735 CXorf65A6NEN9 183 aa10.59□□□□□ -0.71
TROAP-203ENST00000546735 C15orf62A8K5M9 175 aa10.59□□□□□ -0.71
TROAP-203ENST00000546735 NUPL2O15504 423 aaKnown RBP10.59□□□□□ -0.71
TROAP-203ENST00000546735 MT-CO2P00403 227 aa10.59□□□□□ -0.71
TROAP-203ENST00000546735 MFAP4P55083 255 aa10.59□□□□□ -0.71
TROAP-203ENST00000546735 UCP3P55916 312 aa10.59□□□□□ -0.71
TROAP-203ENST00000546735 PRCDQ00LT1 54 aa10.59□□□□□ -0.71
TROAP-203ENST00000546735 LYG2Q86SG7 212 aa10.59□□□□□ -0.71
TROAP-203ENST00000546735 CMTM3Q96MX0 182 aa10.59□□□□□ -0.71
TROAP-203ENST00000546735 RHPN1-AS1Q9BWJ2 59 aa10.59□□□□□ -0.71
TROAP-203ENST00000546735 NAA50Q9GZZ1 169 aaKnown RBP10.59□□□□□ -0.71
TROAP-203ENST00000546735 FAM25AB3EWG3 89 aa10.58□□□□□ -0.72
TROAP-203ENST00000546735 FAM25CB3EWG5 89 aa10.58□□□□□ -0.72
TROAP-203ENST00000546735 FAM25GB3EWG6 89 aa10.58□□□□□ -0.72
TROAP-203ENST00000546735 CHEK1O14757 476 aa10.58□□□□□ -0.72
TROAP-203ENST00000546735 BMI1P35226 326 aa10.58□□□□□ -0.72
TROAP-203ENST00000546735 HSPE1P61604 102 aaKnown RBP10.58□□□□□ -0.72
TROAP-203ENST00000546735 Q6ZWC4 215 aa10.58□□□□□ -0.72
TROAP-203ENST00000546735 WFDC3Q8IUB2 231 aa10.58□□□□□ -0.72
TROAP-203ENST00000546735 STPG3Q8N7X2 389 aa10.58□□□□□ -0.72
TROAP-203ENST00000546735 TMEM116Q8NCL8 245 aa10.58□□□□□ -0.72
TROAP-203ENST00000546735 FAM212BQ9NTI7 297 aaPredicted RBP10.58□□□□□ -0.72
TROAP-203ENST00000546735 KLK11Q9UBX7 282 aa10.58□□□□□ -0.72
TROAP-203ENST00000546735 IGKV1-5P01602 117 aa10.57□□□□□ -0.72
TROAP-203ENST00000546735 PGAM2P15259 253 aa10.57□□□□□ -0.72
TROAP-203ENST00000546735 FCGR2BP31994 310 aaPredicted RBP10.57□□□□□ -0.72
TROAP-203ENST00000546735 RORCP51449 518 aa10.57□□□□□ -0.72
TROAP-203ENST00000546735 RELQ04864 619 aaPredicted RBP10.57□□□□□ -0.72
TROAP-203ENST00000546735 GBGT1Q8N5D6 347 aa10.57□□□□□ -0.72
TROAP-203ENST00000546735 ZNF114Q8NC26 417 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms