RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 TSPO2Q5TGU0 170 aa7.4□□□□□ -1.23
VPS13D-212ENST00000543766 Q6ZVL8 140 aa7.4□□□□□ -1.23
VPS13D-212ENST00000543766 C20orf196Q8IYI0 205 aa7.4□□□□□ -1.23
VPS13D-212ENST00000543766 OR1L1Q8NH94 360 aa7.4□□□□□ -1.23
VPS13D-212ENST00000543766 RPS4Y1P22090 263 aaKnown RBP7.39□□□□□ -1.23
VPS13D-212ENST00000543766 DRD3P35462 400 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 ZNF141Q15928 474 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 AMTNQ6UX39 209 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 ANKRD29Q8N6D5 301 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 FOXC2Q99958 501 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 ATG2AQ2TAZ0 1938 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 H0YIZ8 118 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 UNC119Q13432 240 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 Q8NA96 180 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 OR4F17Q8NGA8 305 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 RBMXL1Q96E39 390 aaKnown RBP7.39□□□□□ -1.23
VPS13D-212ENST00000543766 AQP10Q96PS8 301 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 OR4F4Q96R69 305 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 OR1A2Q9Y585 309 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 LMO7DNF2Z398 122 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 F8W1H4 67 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 H3BRM9 83 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 H3BVH4 76 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 AMY1AP04745 511 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 C3orf79P0CE67 100 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 PRSS3P35030 304 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 RND3P61587 244 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 FOXI2Q6ZQN5 318 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 Q6ZSR6 202 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 VGLL1Q99990 258 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 SPRY4Q9C004 299 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 NAA60Q9H7X0 242 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 TAAR2Q9P1P5 351 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 TTC28Q96AY4 2481 aa7.39□□□□□ -1.23
VPS13D-212ENST00000543766 NTN1O95631 604 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 CCL5P13501 91 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 RBMXP38159 391 aaKnown RBP7.38□□□□□ -1.23
VPS13D-212ENST00000543766 VAX1Q5SQQ9 334 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 TMEM64Q6YI46 380 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 C9orf40Q8IXQ3 194 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 TPRX1Q8N7U7 411 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 BCL2L10Q9HD36 194 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 TICRRQ7Z2Z1 1910 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 VWA8A3KMH1 1905 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 MED12Q93074 2177 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 H0YJW9 148 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 NDUFC2O95298 119 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 NAPSAO96009 420 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 ERVK-16P61578 105 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 CDSNQ15517 529 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 PMS2CLQ68D20 193 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 SLC25A42Q86VD7 318 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 OR5H2Q8NGV7 314 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 C2orf15Q8WU43 125 aaKnown RBP7.38□□□□□ -1.23
VPS13D-212ENST00000543766 NMES1Q9C002 83 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 MARCH2Q9P0N8 246 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 SPAG17Q6Q759 2223 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 EML5Q05BV3 1969 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 KBTBD11O94819 623 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 IGLV3-27P01718 113 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 ATP5L2Q7Z4Y8 100 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 RFLNBQ8N5W9 214 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 OR1L3Q8NH93 324 aa7.38□□□□□ -1.23
VPS13D-212ENST00000543766 PLXNA2O75051 1894 aa7.37□□□□□ -1.23
VPS13D-212ENST00000543766 TRAV8-2A0A0B4J237 113 aa7.37□□□□□ -1.23
VPS13D-212ENST00000543766 LYZL6O75951 148 aa7.37□□□□□ -1.23
VPS13D-212ENST00000543766 APOHP02749 345 aaPredicted RBP7.37□□□□□ -1.23
VPS13D-212ENST00000543766 ELANEP08246 267 aa7.37□□□□□ -1.23
VPS13D-212ENST00000543766 UBE2G1P62253 170 aa7.37□□□□□ -1.23
VPS13D-212ENST00000543766 NPIPB3Q92617 1050 aa7.37□□□□□ -1.23
VPS13D-212ENST00000543766 DSCR8Q96T75 97 aa7.37□□□□□ -1.23
VPS13D-212ENST00000543766 KLF12Q9Y4X4 402 aa7.37□□□□□ -1.23
VPS13D-212ENST00000543766 JTBO76095 146 aa7.37□□□□□ -1.23
VPS13D-212ENST00000543766 CLDN2P57739 230 aa7.37□□□□□ -1.23
VPS13D-212ENST00000543766 OR10J6PQ8NGY7 276 aa7.37□□□□□ -1.23
VPS13D-212ENST00000543766 C10orf105Q8TEF2 133 aa7.37□□□□□ -1.23
VPS13D-212ENST00000543766 NABP1Q96AH0 204 aa7.37□□□□□ -1.23
VPS13D-212ENST00000543766 BORCS8Q96FH0 119 aa7.37□□□□□ -1.23
VPS13D-212ENST00000543766 SMIM7Q9BQ49 75 aa7.37□□□□□ -1.23
VPS13D-212ENST00000543766 CDIP1Q9H305 208 aa7.37□□□□□ -1.23
VPS13D-212ENST00000543766 RPUSD1Q9UJJ7 312 aaKnown RBP7.37□□□□□ -1.23
VPS13D-212ENST00000543766 A0A096LPE4 126 aa7.37□□□□□ -1.23
VPS13D-212ENST00000543766 A0A1W2PPZ6 126 aa7.37□□□□□ -1.23
VPS13D-212ENST00000543766 TMEM250H0YL14 139 aa7.37□□□□□ -1.23
VPS13D-212ENST00000543766 HSPE1P61604 102 aaKnown RBP7.37□□□□□ -1.23
VPS13D-212ENST00000543766 SP5Q6BEB4 398 aaPredicted RBP7.37□□□□□ -1.23
VPS13D-212ENST00000543766 OR8B3Q8NGG8 313 aa7.37□□□□□ -1.23
VPS13D-212ENST00000543766 NEUROG1Q92886 237 aa7.37□□□□□ -1.23
VPS13D-212ENST00000543766 PRORYQ9H606 182 aa7.37□□□□□ -1.23
VPS13D-212ENST00000543766 IER3IP1Q9Y5U9 82 aa7.37□□□□□ -1.23
VPS13D-212ENST00000543766 V9GY05 133 aa7.37□□□□□ -1.23
VPS13D-212ENST00000543766 TRAV1-1A0A0B4J248 108 aa7.36□□□□□ -1.23
VPS13D-212ENST00000543766 hDV102S1A0JD36 115 aa7.36□□□□□ -1.23
VPS13D-212ENST00000543766 C17orf112F2Z3M2 114 aa7.36□□□□□ -1.23
VPS13D-212ENST00000543766 CDC42EP2O14613 210 aa7.36□□□□□ -1.23
VPS13D-212ENST00000543766 SEC11BP0C7V7 166 aa7.36□□□□□ -1.23
VPS13D-212ENST00000543766 SMIM13P0DJ93 91 aa7.36□□□□□ -1.23
VPS13D-212ENST00000543766 CLDN6P56747 220 aa7.36□□□□□ -1.23
VPS13D-212ENST00000543766 RPL15P61313 204 aaKnown RBP7.36□□□□□ -1.23
VPS13D-212ENST00000543766 FOXI1Q12951 378 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms