RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 IFT46Q9NQC8 304 aa6.67□□□□□ -1.34
USP28-205ENST00000537706 ZNF230Q9UIE0 474 aaPredicted RBP6.67□□□□□ -1.34
USP28-205ENST00000537706 PLA2G2DQ9UNK4 145 aa6.67□□□□□ -1.34
USP28-205ENST00000537706 BOLA1Q9Y3E2 137 aa6.67□□□□□ -1.34
USP28-205ENST00000537706 SAA2-SAA4A0A096LPE2 208 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 A8MWP6 167 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 DISC1C4P0D8 188 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 M0QYG6 137 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 MFNGO00587 321 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 CRTAPO75718 401 aaPredicted RBP6.66□□□□□ -1.34
USP28-205ENST00000537706 CA1P00915 261 aaPredicted RBP6.66□□□□□ -1.34
USP28-205ENST00000537706 RLN1P04808 185 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 GIPP09681 153 aaPredicted RBP6.66□□□□□ -1.34
USP28-205ENST00000537706 ZNF735P0CB33 412 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 SAA2P0DJI9 122 aaPredicted RBP6.66□□□□□ -1.34
USP28-205ENST00000537706 MYOD1P15172 320 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 GNB3P16520 340 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 FAM3BP58499 235 aaPredicted RBP6.66□□□□□ -1.34
USP28-205ENST00000537706 LYPD1Q8N2G4 141 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 FAM89BQ8N5H3 189 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 OR1L1Q8NH94 360 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 TNFAIP8L1Q8WVP5 186 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 RAB3CQ96E17 227 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 TM2D1Q9BX74 207 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 IFT22Q9H7X7 185 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 MRPL27Q9P0M9 148 aaKnown RBP6.66□□□□□ -1.34
USP28-205ENST00000537706 MGAT4CQ9UBM8 478 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 ELF5Q9UKW6 265 aaPredicted RBP6.66□□□□□ -1.34
USP28-205ENST00000537706 TMEM213A2RRL7 107 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 FOXI3A8MTJ6 420 aaPredicted RBP6.66□□□□□ -1.34
USP28-205ENST00000537706 FAM90A23PA8MXZ1 464 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 PPP5D1E7EU14 171 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 TSPAN4O14817 238 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 RAB29O14966 203 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 SSX5O60225 188 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 MIFP14174 115 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 MGMTP16455 207 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 NAT1P18440 290 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 ARL3P36405 182 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 CBX5P45973 191 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 RAP2BP61225 183 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 ARL6IP1Q15041 203 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 PIGYQ3MUY2 71 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 SLC22A6Q4U2R8 563 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 Q5BKY6 102 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 PLAC9Q5JTB6 97 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 ZNF497Q6ZNH5 498 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 ODF3L1Q8IXM7 274 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 ASB13Q8WXK3 278 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 FAM210BQ96KR6 192 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 SELENOIQ9C0D9 397 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 BANF2Q9H503 90 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 C5orf66Q9H5L9 145 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 ST3GAL6Q9Y274 331 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 HSPB11Q9Y547 144 aa6.66□□□□□ -1.34
USP28-205ENST00000537706 A0A1W2PP11 408 aa6.65□□□□□ -1.34
USP28-205ENST00000537706 G3V3Q6 166 aa6.65□□□□□ -1.34
USP28-205ENST00000537706 H0YJW9 148 aa6.65□□□□□ -1.34
USP28-205ENST00000537706 FAM229AH3BQW9 127 aa6.65□□□□□ -1.34
USP28-205ENST00000537706 YPEL1O60688 119 aa6.65□□□□□ -1.34
USP28-205ENST00000537706 ZNF780AO75290 641 aaPredicted RBP6.65□□□□□ -1.34
USP28-205ENST00000537706 CA11O75493 328 aa6.65□□□□□ -1.34
USP28-205ENST00000537706 FCER2P06734 321 aa6.65□□□□□ -1.34
USP28-205ENST00000537706 DHODHQ02127 395 aa6.65□□□□□ -1.34
USP28-205ENST00000537706 ZNF585BQ52M93 769 aa6.65□□□□□ -1.34
USP28-205ENST00000537706 LY6G6FQ5SQ64 297 aa6.65□□□□□ -1.34
USP28-205ENST00000537706 NECAP1Q8NC96 275 aa6.65□□□□□ -1.34
USP28-205ENST00000537706 OR13C8Q8NGS7 320 aa6.65□□□□□ -1.34
USP28-205ENST00000537706 OR2T35Q8NGX2 323 aa6.65□□□□□ -1.34
USP28-205ENST00000537706 ZNF431Q8TF32 576 aaPredicted RBP6.65□□□□□ -1.34
USP28-205ENST00000537706 YPEL2Q96QA6 119 aa6.65□□□□□ -1.34
USP28-205ENST00000537706 OR2A7Q96R45 310 aa6.65□□□□□ -1.34
USP28-205ENST00000537706 S100A13Q99584 98 aa6.65□□□□□ -1.34
USP28-205ENST00000537706 SPACA1Q9HBV2 294 aa6.65□□□□□ -1.34
USP28-205ENST00000537706 MGAT4AQ9UM21 535 aa6.65□□□□□ -1.34
USP28-205ENST00000537706 KCNK7Q9Y2U2 307 aa6.65□□□□□ -1.34
USP28-205ENST00000537706 UFC1Q9Y3C8 167 aa6.65□□□□□ -1.34
USP28-205ENST00000537706 TMED3Q9Y3Q3 217 aa6.65□□□□□ -1.34
USP28-205ENST00000537706 MCRIP1C9JLW8 97 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 SOCS1O15524 211 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 APOA2P02652 100 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 SERPINA2P20848 420 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 HRH1P35367 487 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 PPP1CCP36873 323 aaKnown RBP6.64□□□□□ -1.35
USP28-205ENST00000537706 MPV17LQ2QL34 196 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 ODF3L2Q3SX64 289 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 ARRDC1Q8N5I2 433 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 Q8NAQ8 132 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 OR11H4Q8NGC9 324 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 OR52L2PQ8NGH6 319 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 ARHGAP5-AS1Q96IT6 56 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 Q96M66 194 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 IL36GQ9NZH8 169 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 LRP1BQ9NZR2 4599 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 IGHV4-28A0A0C4DH34 117 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 HLA-AP01891 365 aaKnown RBP6.64□□□□□ -1.35
USP28-205ENST00000537706 OR4E1P0C645 316 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 CT45A6P0DMU7 189 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 CT45A5P0DMU8 189 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 CT45A7P0DMV0 189 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms