RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 P0C879 139 aa11.19□□□□□ -0.62
USP28-204ENST00000537642 AKAIN1P0CW23 69 aa11.19□□□□□ -0.62
USP28-204ENST00000537642 IGHV4-30-4P0DP06 118 aa11.19□□□□□ -0.62
USP28-204ENST00000537642 DEFB114Q30KQ6 69 aa11.19□□□□□ -0.62
USP28-204ENST00000537642 SP6Q3SY56 376 aa11.19□□□□□ -0.62
USP28-204ENST00000537642 CD300EQ496F6 205 aaPredicted RBP11.19□□□□□ -0.62
USP28-204ENST00000537642 FAM106AQ4KMX7 169 aa11.19□□□□□ -0.62
USP28-204ENST00000537642 CCDC71LQ8N9Z2 235 aa11.19□□□□□ -0.62
USP28-204ENST00000537642 RTBDNQ9BSG5 229 aaPredicted RBP11.19□□□□□ -0.62
USP28-204ENST00000537642 RSL24D1Q9UHA3 163 aaKnown RBP11.19□□□□□ -0.62
USP28-204ENST00000537642 ANKRD20A5PA0PJZ0 165 aa11.18□□□□□ -0.62
USP28-204ENST00000537642 ZNF320A2RRD8 509 aa11.18□□□□□ -0.62
USP28-204ENST00000537642 TMEM213A2RRL7 107 aa11.18□□□□□ -0.62
USP28-204ENST00000537642 A8MWP6 167 aa11.18□□□□□ -0.62
USP28-204ENST00000537642 K7EIM0 57 aa11.18□□□□□ -0.62
USP28-204ENST00000537642 UCP1P25874 307 aa11.18□□□□□ -0.62
USP28-204ENST00000537642 HSPE1P61604 102 aaKnown RBP11.18□□□□□ -0.62
USP28-204ENST00000537642 PRCDQ00LT1 54 aa11.18□□□□□ -0.62
USP28-204ENST00000537642 UNQ9165/PRO28630Q6UXU0 137 aa11.18□□□□□ -0.62
USP28-204ENST00000537642 OR2C3Q8N628 320 aa11.18□□□□□ -0.62
USP28-204ENST00000537642 DYNLRB2Q8TF09 96 aa11.18□□□□□ -0.62
USP28-204ENST00000537642 CACNG8Q8WXS5 425 aa11.18□□□□□ -0.62
USP28-204ENST00000537642 RBM38Q9H0Z9 239 aaKnown RBP11.18□□□□□ -0.62
USP28-204ENST00000537642 C19orf73Q9NVV2 129 aa11.18□□□□□ -0.62
USP28-204ENST00000537642 DNAH7Q8WXX0 4024 aa11.18□□□□□ -0.62
USP28-204ENST00000537642 A0A0B4J293 547 aa11.17□□□□□ -0.62
USP28-204ENST00000537642 IGHV3-35A0A0C4DH35 117 aa11.17□□□□□ -0.62
USP28-204ENST00000537642 FABP12A6NFH5 140 aa11.17□□□□□ -0.62
USP28-204ENST00000537642 OR2T8A6NH00 312 aa11.17□□□□□ -0.62
USP28-204ENST00000537642 ZNF785A8K8V0 405 aa11.17□□□□□ -0.62
USP28-204ENST00000537642 A8MZ25 164 aa11.17□□□□□ -0.62
USP28-204ENST00000537642 F8W735 103 aaPredicted RBP11.17□□□□□ -0.62
USP28-204ENST00000537642 TGOLN2O43493 480 aa11.17□□□□□ -0.62
USP28-204ENST00000537642 CBLN1P23435 193 aa11.17□□□□□ -0.62
USP28-204ENST00000537642 AKR1C2P52895 323 aa11.17□□□□□ -0.62
USP28-204ENST00000537642 SURF2Q15527 256 aaPredicted RBP11.17□□□□□ -0.62
USP28-204ENST00000537642 TRIM16LQ309B1 348 aa11.17□□□□□ -0.62
USP28-204ENST00000537642 PLET1Q6UQ28 207 aa11.17□□□□□ -0.62
USP28-204ENST00000537642 SGPP2Q8IWX5 399 aa11.17□□□□□ -0.62
USP28-204ENST00000537642 OR51S1Q8NGJ8 323 aa11.17□□□□□ -0.62
USP28-204ENST00000537642 OR1L6Q8NGR2 347 aa11.17□□□□□ -0.62
USP28-204ENST00000537642 OR1P1Q8NH06 330 aa11.17□□□□□ -0.62
USP28-204ENST00000537642 SCARB1Q8WTV0 552 aa11.17□□□□□ -0.62
USP28-204ENST00000537642 WWC2-AS2Q96NR7 200 aa11.17□□□□□ -0.62
USP28-204ENST00000537642 ZNF436Q9C0F3 470 aaPredicted RBP11.17□□□□□ -0.62
USP28-204ENST00000537642 C5orf66Q9H5L9 145 aa11.17□□□□□ -0.62
USP28-204ENST00000537642 C21orf62Q9NYP8 219 aa11.17□□□□□ -0.62
USP28-204ENST00000537642 TECRQ9NZ01 308 aaKnown RBP11.17□□□□□ -0.62
USP28-204ENST00000537642 GPR132Q9UNW8 380 aa11.17□□□□□ -0.62
USP28-204ENST00000537642 C14orf166Q9Y224 244 aaKnown RBP11.17□□□□□ -0.62
USP28-204ENST00000537642 A0A0G2JRQ6 117 aa11.16□□□□□ -0.62
USP28-204ENST00000537642 CCDC160A6NGH7 325 aa11.16□□□□□ -0.62
USP28-204ENST00000537642 B3GALNT1O75752 331 aa11.16□□□□□ -0.62
USP28-204ENST00000537642 OR5AC1P0C628 307 aa11.16□□□□□ -0.62
USP28-204ENST00000537642 TM4SF20Q53R12 229 aa11.16□□□□□ -0.62
USP28-204ENST00000537642 SPINK9Q5DT21 86 aa11.16□□□□□ -0.62
USP28-204ENST00000537642 GTSCR1Q86UQ5 136 aa11.16□□□□□ -0.62
USP28-204ENST00000537642 UXS1Q8NBZ7 420 aa11.16□□□□□ -0.62
USP28-204ENST00000537642 ZNF114Q8NC26 417 aa11.16□□□□□ -0.62
USP28-204ENST00000537642 BSCL2Q96G97 398 aaPredicted RBP11.16□□□□□ -0.62
USP28-204ENST00000537642 PRRT1Q99946 306 aa11.16□□□□□ -0.62
USP28-204ENST00000537642 NAA60Q9H7X0 242 aa11.16□□□□□ -0.62
USP28-204ENST00000537642 SLC2A8Q9NY64 477 aa11.16□□□□□ -0.62
USP28-204ENST00000537642 MLXQ9UH92 298 aa11.16□□□□□ -0.62
USP28-204ENST00000537642 SELENOKQ9Y6D0 94 aa11.16□□□□□ -0.62
USP28-204ENST00000537642 ST8SIA3O43173 380 aa11.15□□□□□ -0.62
USP28-204ENST00000537642 ATG12O94817 140 aa11.15□□□□□ -0.62
USP28-204ENST00000537642 LHFPL5Q8TAF8 219 aa11.15□□□□□ -0.62
USP28-204ENST00000537642 GLYATL2Q8WU03 294 aa11.15□□□□□ -0.62
USP28-204ENST00000537642 MISP3Q96FF7 219 aa11.15□□□□□ -0.62
USP28-204ENST00000537642 WDR89Q96FK6 387 aaPredicted RBP11.15□□□□□ -0.62
USP28-204ENST00000537642 ATP6V0BQ99437 205 aa11.15□□□□□ -0.62
USP28-204ENST00000537642 CHRDL1Q9BU40 450 aa11.15□□□□□ -0.62
USP28-204ENST00000537642 TMEM222Q9H0R3 208 aa11.15□□□□□ -0.62
USP28-204ENST00000537642 PLEKHA3Q9HB20 300 aa11.15□□□□□ -0.62
USP28-204ENST00000537642 STAB2Q8WWQ8 2551 aa11.15□□□□□ -0.63
USP28-204ENST00000537642 TEX13DA0A0J9YY54 714 aaPredicted RBP11.14□□□□□ -0.63
USP28-204ENST00000537642 CRYM-AS1A6NIL9 109 aa11.14□□□□□ -0.63
USP28-204ENST00000537642 I3L2K1 104 aa11.14□□□□□ -0.63
USP28-204ENST00000537642 CDS2O95674 445 aa11.14□□□□□ -0.63
USP28-204ENST00000537642 C8orf88P0DMB2 117 aa11.14□□□□□ -0.63
USP28-204ENST00000537642 ADMP35318 185 aa11.14□□□□□ -0.63
USP28-204ENST00000537642 ERHP84090 104 aaKnown RBP11.14□□□□□ -0.63
USP28-204ENST00000537642 SPSB3Q6PJ21 355 aa11.14□□□□□ -0.63
USP28-204ENST00000537642 Q6ZRM9 215 aa11.14□□□□□ -0.63
USP28-204ENST00000537642 UBAC2Q8NBM4 344 aa11.14□□□□□ -0.63
USP28-204ENST00000537642 TMEM190Q8WZ59 177 aa11.14□□□□□ -0.63
USP28-204ENST00000537642 RRNAD1Q96FB5 475 aaKnown RBP11.14□□□□□ -0.63
USP28-204ENST00000537642 PALMDQ9NP74 551 aa11.14□□□□□ -0.63
USP28-204ENST00000537642 V9GYH0 126 aa11.14□□□□□ -0.63
USP28-204ENST00000537642 INS-IGF2F8WCM5 200 aa11.13□□□□□ -0.63
USP28-204ENST00000537642 IFNA17P01571 189 aa11.13□□□□□ -0.63
USP28-204ENST00000537642 CD7P09564 240 aa11.13□□□□□ -0.63
USP28-204ENST00000537642 ELLP55199 621 aaPredicted RBP11.13□□□□□ -0.63
USP28-204ENST00000537642 CD81P60033 236 aa11.13□□□□□ -0.63
USP28-204ENST00000537642 DHODHQ02127 395 aa11.13□□□□□ -0.63
USP28-204ENST00000537642 GUCA2BQ16661 112 aa11.13□□□□□ -0.63
USP28-204ENST00000537642 Q56UQ5 140 aa11.13□□□□□ -0.63
USP28-204ENST00000537642 ZNF57Q68EA5 555 aaPredicted RBP11.13□□□□□ -0.63
USP28-204ENST00000537642 BTNL8Q6UX41 500 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms