RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 ZNF680Q8NEM1 530 aa17.4■□□□□ 0.38
PACSIN3-209ENST00000532457 ST8SIA2Q92186 375 aa17.4■□□□□ 0.38
PACSIN3-209ENST00000532457 ZNF48Q96MX3 618 aaPredicted RBP17.4■□□□□ 0.38
PACSIN3-209ENST00000532457 RBM14Q96PK6 669 aaKnown RBP17.4■□□□□ 0.38
PACSIN3-209ENST00000532457 A6NDX4 124 aa17.39■□□□□ 0.37
PACSIN3-209ENST00000532457 INS-IGF2F8WCM5 200 aa17.39■□□□□ 0.37
PACSIN3-209ENST00000532457 AMY1AP04745 511 aa17.39■□□□□ 0.37
PACSIN3-209ENST00000532457 REG1AP05451 166 aa17.39■□□□□ 0.37
PACSIN3-209ENST00000532457 AREGP15514 252 aa17.39■□□□□ 0.37
PACSIN3-209ENST00000532457 C19orf35Q6ZS72 473 aa17.39■□□□□ 0.37
PACSIN3-209ENST00000532457 SRSF12Q8WXF0 261 aaKnown RBP17.39■□□□□ 0.37
PACSIN3-209ENST00000532457 OR13C7P0DN81 318 aa17.38■□□□□ 0.37
PACSIN3-209ENST00000532457 RNASE2P10153 161 aaKnown RBP17.38■□□□□ 0.37
PACSIN3-209ENST00000532457 NDPQ00604 133 aa17.38■□□□□ 0.37
PACSIN3-209ENST00000532457 FXYD3Q14802 87 aa17.38■□□□□ 0.37
PACSIN3-209ENST00000532457 ZNF562Q6V9R5 426 aa17.38■□□□□ 0.37
PACSIN3-209ENST00000532457 SLC24A4Q8NFF2 622 aa17.38■□□□□ 0.37
PACSIN3-209ENST00000532457 SLC25A33Q9BSK2 321 aa17.38■□□□□ 0.37
PACSIN3-209ENST00000532457 C1RLQ9NZP8 487 aa17.38■□□□□ 0.37
PACSIN3-209ENST00000532457 PRSS46E5RG02 174 aa17.37■□□□□ 0.37
PACSIN3-209ENST00000532457 CNIH1O95406 144 aa17.37■□□□□ 0.37
PACSIN3-209ENST00000532457 LY86O95711 162 aa17.37■□□□□ 0.37
PACSIN3-209ENST00000532457 RBMS3Q6XE24 437 aaKnown RBP17.37■□□□□ 0.37
PACSIN3-209ENST00000532457 STPG2Q8N412 459 aa17.37■□□□□ 0.37
PACSIN3-209ENST00000532457 OR1S2Q8NGQ3 325 aa17.37■□□□□ 0.37
PACSIN3-209ENST00000532457 HSPB9Q9BQS6 159 aa17.37■□□□□ 0.37
PACSIN3-209ENST00000532457 FAM103A1Q9BTL3 118 aaKnown RBP17.37■□□□□ 0.37
PACSIN3-209ENST00000532457 RFNGQ9Y644 331 aa17.37■□□□□ 0.37
PACSIN3-209ENST00000532457 IGHV7-81A0A0B4J1V7 117 aa17.37■□□□□ 0.37
PACSIN3-209ENST00000532457 A0A1W2PN81 502 aa17.37■□□□□ 0.37
PACSIN3-209ENST00000532457 LINC01548A6NM66 108 aa17.37■□□□□ 0.37
PACSIN3-209ENST00000532457 IGHV4-59P01825 116 aa17.37■□□□□ 0.37
PACSIN3-209ENST00000532457 EGR2P11161 476 aaPredicted RBP17.37■□□□□ 0.37
PACSIN3-209ENST00000532457 NPY1RP25929 384 aa17.37■□□□□ 0.37
PACSIN3-209ENST00000532457 CHRNA7P36544 502 aa17.37■□□□□ 0.37
PACSIN3-209ENST00000532457 EXOSC2Q13868 293 aaKnown RBP17.37■□□□□ 0.37
PACSIN3-209ENST00000532457 AANATQ16613 207 aa17.37■□□□□ 0.37
PACSIN3-209ENST00000532457 C5orf56Q8N8D9 126 aa17.37■□□□□ 0.37
PACSIN3-209ENST00000532457 STOML3Q8TAV4 291 aa17.37■□□□□ 0.37
PACSIN3-209ENST00000532457 FBXO7Q9Y3I1 522 aa17.37■□□□□ 0.37
PACSIN3-209ENST00000532457 SLC38A11Q08AI6 406 aa17.36■□□□□ 0.37
PACSIN3-209ENST00000532457 TUSC1Q2TAM9 212 aa17.36■□□□□ 0.37
PACSIN3-209ENST00000532457 ALKAL2Q6UX46 152 aa17.36■□□□□ 0.37
PACSIN3-209ENST00000532457 ETV3LQ6ZN32 361 aa17.36■□□□□ 0.37
PACSIN3-209ENST00000532457 SSMEM1Q8WWF3 244 aa17.36■□□□□ 0.37
PACSIN3-209ENST00000532457 P2RX4Q99571 388 aa17.36■□□□□ 0.37
PACSIN3-209ENST00000532457 ARV1Q9H2C2 271 aa17.36■□□□□ 0.37
PACSIN3-209ENST00000532457 HTR2BP41595 481 aa17.35■□□□□ 0.37
PACSIN3-209ENST00000532457 IER3P46695 156 aa17.35■□□□□ 0.37
PACSIN3-209ENST00000532457 RPP30P78346 268 aaKnown RBP17.35■□□□□ 0.37
PACSIN3-209ENST00000532457 ERHP84090 104 aaKnown RBP17.35■□□□□ 0.37
PACSIN3-209ENST00000532457 MLANAQ16655 118 aa17.35■□□□□ 0.37
PACSIN3-209ENST00000532457 BAP18Q8IXM2 172 aa17.35■□□□□ 0.37
PACSIN3-209ENST00000532457 OR10P1Q8NGE3 313 aa17.35■□□□□ 0.37
PACSIN3-209ENST00000532457 ZNF418Q8TF45 676 aaPredicted RBP17.35■□□□□ 0.37
PACSIN3-209ENST00000532457 RASL11BQ9BPW5 248 aa17.35■□□□□ 0.37
PACSIN3-209ENST00000532457 CUBNO60494 3623 aa17.35■□□□□ 0.37
PACSIN3-209ENST00000532457 OR8U8P0C7N1 319 aa17.35■□□□□ 0.37
PACSIN3-209ENST00000532457 MFAP2P55001 183 aa17.35■□□□□ 0.37
PACSIN3-209ENST00000532457 UBA52P62987 128 aaKnown RBP17.35■□□□□ 0.37
PACSIN3-209ENST00000532457 C2orf83Q53S99 150 aa17.35■□□□□ 0.37
PACSIN3-209ENST00000532457 ASPHD1Q5U4P2 390 aa17.35■□□□□ 0.37
PACSIN3-209ENST00000532457 LURAP1LQ8IV03 231 aa17.35■□□□□ 0.37
PACSIN3-209ENST00000532457 SLC7A5P1Q8MH63 180 aa17.35■□□□□ 0.37
PACSIN3-209ENST00000532457 UBAC2Q8NBM4 344 aa17.35■□□□□ 0.37
PACSIN3-209ENST00000532457 ATP5SQ99766 215 aa17.35■□□□□ 0.37
PACSIN3-209ENST00000532457 PLA2G2EQ9NZK7 142 aa17.35■□□□□ 0.37
PACSIN3-209ENST00000532457 JTBO76095 146 aa17.34■□□□□ 0.37
PACSIN3-209ENST00000532457 HLA-DRB1P01911 266 aa17.34■□□□□ 0.37
PACSIN3-209ENST00000532457 SNCAP37840 140 aa17.34■□□□□ 0.37
PACSIN3-209ENST00000532457 Q6YL49 198 aa17.34■□□□□ 0.37
PACSIN3-209ENST00000532457 IFNA4P05014 189 aa17.33■□□□□ 0.37
PACSIN3-209ENST00000532457 HBG1P69891 147 aa17.33■□□□□ 0.37
PACSIN3-209ENST00000532457 HBG2P69892 147 aa17.33■□□□□ 0.37
PACSIN3-209ENST00000532457 PRDM13Q9H4Q3 707 aa17.33■□□□□ 0.37
PACSIN3-209ENST00000532457 MOB4Q9Y3A3 225 aa17.33■□□□□ 0.37
PACSIN3-209ENST00000532457 DMRT1Q9Y5R6 373 aa17.33■□□□□ 0.37
PACSIN3-209ENST00000532457 TPT1P13693 172 aaKnown RBP17.33■□□□□ 0.36
PACSIN3-209ENST00000532457 ARPC1AQ92747 370 aa17.33■□□□□ 0.36
PACSIN3-209ENST00000532457 FBXO24O75426 580 aa17.32■□□□□ 0.36
PACSIN3-209ENST00000532457 RAB11AP62491 216 aa17.32■□□□□ 0.36
PACSIN3-209ENST00000532457 LILRB2Q8N423 598 aa17.32■□□□□ 0.36
PACSIN3-209ENST00000532457 GINS3Q9BRX5 216 aa17.32■□□□□ 0.36
PACSIN3-209ENST00000532457 TNFRSF19Q9NS68 423 aa17.32■□□□□ 0.36
PACSIN3-209ENST00000532457 BORCS7-ASMTA0A0B4J1R7 106 aa17.31■□□□□ 0.36
PACSIN3-209ENST00000532457 PVRIGQ6DKI7 326 aa17.31■□□□□ 0.36
PACSIN3-209ENST00000532457 SIGLECL1Q8N7X8 197 aa17.31■□□□□ 0.36
PACSIN3-209ENST00000532457 HSD17B11Q8NBQ5 300 aa17.31■□□□□ 0.36
PACSIN3-209ENST00000532457 JMJD8Q96S16 334 aa17.31■□□□□ 0.36
PACSIN3-209ENST00000532457 SH3BGRL3Q9H299 93 aa17.31■□□□□ 0.36
PACSIN3-209ENST00000532457 FGF16O43320 207 aa17.31■□□□□ 0.36
PACSIN3-209ENST00000532457 VWC2Q2TAL6 325 aa17.31■□□□□ 0.36
PACSIN3-209ENST00000532457 FAM74A1Q5RGS3 127 aa17.31■□□□□ 0.36
PACSIN3-209ENST00000532457 Q6ZS46 218 aa17.31■□□□□ 0.36
PACSIN3-209ENST00000532457 PCNPQ8WW12 178 aaKnown RBP17.31■□□□□ 0.36
PACSIN3-209ENST00000532457 TMED6Q8WW62 240 aa17.31■□□□□ 0.36
PACSIN3-209ENST00000532457 PINX1Q96BK5 328 aaKnown RBP17.31■□□□□ 0.36
PACSIN3-209ENST00000532457 SETD2Q9BYW2 2564 aaPredicted RBP17.3■□□□□ 0.36
PACSIN3-209ENST00000532457 DFFBO76075 338 aa17.3■□□□□ 0.36
PACSIN3-209ENST00000532457 IFNA7P01567 189 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms