RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 PIGPP57054 158 aa12.84□□□□□ -0.35
SQLE-205ENST00000521232 CD81P60033 236 aa12.84□□□□□ -0.35
SQLE-205ENST00000521232 HAGHQ16775 308 aa12.84□□□□□ -0.35
SQLE-205ENST00000521232 TM4SF20Q53R12 229 aa12.84□□□□□ -0.35
SQLE-205ENST00000521232 STEAP1BQ6NZ63 245 aa12.84□□□□□ -0.35
SQLE-205ENST00000521232 LINC00322Q6ZN03 302 aaPredicted RBP12.84□□□□□ -0.35
SQLE-205ENST00000521232 OR1P1Q8NH06 330 aa12.84□□□□□ -0.35
SQLE-205ENST00000521232 DYNC2LI1Q8TCX1 351 aa12.84□□□□□ -0.35
SQLE-205ENST00000521232 SCARB1Q8WTV0 552 aa12.84□□□□□ -0.35
SQLE-205ENST00000521232 MARC2Q969Z3 335 aa12.84□□□□□ -0.35
SQLE-205ENST00000521232 MRGPRFQ96AM1 343 aa12.84□□□□□ -0.35
SQLE-205ENST00000521232 MLXQ9UH92 298 aa12.84□□□□□ -0.35
SQLE-205ENST00000521232 K7EIM0 57 aa12.83□□□□□ -0.36
SQLE-205ENST00000521232 RAB3DO95716 219 aa12.83□□□□□ -0.36
SQLE-205ENST00000521232 CD7P09564 240 aa12.83□□□□□ -0.36
SQLE-205ENST00000521232 HSPE1P61604 102 aaKnown RBP12.83□□□□□ -0.36
SQLE-205ENST00000521232 PRCDQ00LT1 54 aa12.83□□□□□ -0.36
SQLE-205ENST00000521232 ZNF57Q68EA5 555 aaPredicted RBP12.83□□□□□ -0.36
SQLE-205ENST00000521232 SPSB3Q6PJ21 355 aa12.83□□□□□ -0.36
SQLE-205ENST00000521232 OR2C3Q8N628 320 aa12.83□□□□□ -0.36
SQLE-205ENST00000521232 ZFAND1Q8TCF1 268 aa12.83□□□□□ -0.36
SQLE-205ENST00000521232 WDR89Q96FK6 387 aaPredicted RBP12.83□□□□□ -0.36
SQLE-205ENST00000521232 BSCL2Q96G97 398 aaPredicted RBP12.83□□□□□ -0.36
SQLE-205ENST00000521232 TP53RKQ96S44 253 aa12.83□□□□□ -0.36
SQLE-205ENST00000521232 C21orf62Q9NYP8 219 aa12.83□□□□□ -0.36
SQLE-205ENST00000521232 CCDC59Q9P031 241 aaKnown RBP12.83□□□□□ -0.36
SQLE-205ENST00000521232 MRPL27Q9P0M9 148 aaKnown RBP12.83□□□□□ -0.36
SQLE-205ENST00000521232 RABL2AQ9UBK7 228 aaPredicted RBP12.83□□□□□ -0.36
SQLE-205ENST00000521232 RABL2BQ9UNT1 228 aa12.83□□□□□ -0.36
SQLE-205ENST00000521232 UFC1Q9Y3C8 167 aa12.83□□□□□ -0.36
SQLE-205ENST00000521232 IGHV3-35A0A0C4DH35 117 aa12.82□□□□□ -0.36
SQLE-205ENST00000521232 C3orf85A0A1B0GTC6 90 aa12.82□□□□□ -0.36
SQLE-205ENST00000521232 OR2T8A6NH00 312 aa12.82□□□□□ -0.36
SQLE-205ENST00000521232 F8W735 103 aaPredicted RBP12.82□□□□□ -0.36
SQLE-205ENST00000521232 CTDSPLO15194 276 aa12.82□□□□□ -0.36
SQLE-205ENST00000521232 RPL5P46777 297 aaKnown RBP12.82□□□□□ -0.36
SQLE-205ENST00000521232 GUCA2BQ16661 112 aa12.82□□□□□ -0.36
SQLE-205ENST00000521232 TMEM61Q8N0U2 210 aa12.82□□□□□ -0.36
SQLE-205ENST00000521232 CITED4Q96RK1 184 aa12.82□□□□□ -0.36
SQLE-205ENST00000521232 PLEKHA3Q9HB20 300 aa12.82□□□□□ -0.36
SQLE-205ENST00000521232 IGHV3-21A0A0B4J1V1 117 aa12.81□□□□□ -0.36
SQLE-205ENST00000521232 IGKV1-5P01602 117 aa12.81□□□□□ -0.36
SQLE-205ENST00000521232 P0C879 139 aa12.81□□□□□ -0.36
SQLE-205ENST00000521232 PPP5CP53041 499 aa12.81□□□□□ -0.36
SQLE-205ENST00000521232 MEF2DQ14814 521 aa12.81□□□□□ -0.36
SQLE-205ENST00000521232 SCGB2B2Q4G0G5 96 aa12.81□□□□□ -0.36
SQLE-205ENST00000521232 DEFB125Q8N687 156 aa12.81□□□□□ -0.36
SQLE-205ENST00000521232 CCDC71LQ8N9Z2 235 aa12.81□□□□□ -0.36
SQLE-205ENST00000521232 ZNF114Q8NC26 417 aa12.81□□□□□ -0.36
SQLE-205ENST00000521232 OR13C8Q8NGS7 320 aa12.81□□□□□ -0.36
SQLE-205ENST00000521232 MUC7Q8TAX7 377 aa12.81□□□□□ -0.36
SQLE-205ENST00000521232 MARCH1Q8TCQ1 289 aa12.81□□□□□ -0.36
SQLE-205ENST00000521232 SMIM4Q8WVI0 70 aa12.81□□□□□ -0.36
SQLE-205ENST00000521232 TMEM190Q8WZ59 177 aa12.81□□□□□ -0.36
SQLE-205ENST00000521232 DIRAS2Q96HU8 199 aa12.81□□□□□ -0.36
SQLE-205ENST00000521232 SPATA25Q9BR10 227 aa12.81□□□□□ -0.36
SQLE-205ENST00000521232 CHRDL1Q9BU40 450 aa12.81□□□□□ -0.36
SQLE-205ENST00000521232 COPZ2Q9P299 210 aa12.81□□□□□ -0.36
SQLE-205ENST00000521232 CSMD3Q7Z407 3707 aa12.8□□□□□ -0.36
SQLE-205ENST00000521232 DYNC2H1Q8NCM8 4307 aaKnown RBP12.8□□□□□ -0.36
SQLE-205ENST00000521232 TRAV25A0A0B4J276 109 aa12.8□□□□□ -0.36
SQLE-205ENST00000521232 A0A0B4J293 547 aa12.8□□□□□ -0.36
SQLE-205ENST00000521232 OR11H12B2RN74 326 aa12.8□□□□□ -0.36
SQLE-205ENST00000521232 I3L2K1 104 aa12.8□□□□□ -0.36
SQLE-205ENST00000521232 NDUFA4O00483 81 aa12.8□□□□□ -0.36
SQLE-205ENST00000521232 B3GALNT1O75752 331 aa12.8□□□□□ -0.36
SQLE-205ENST00000521232 ATG12O94817 140 aa12.8□□□□□ -0.36
SQLE-205ENST00000521232 CTSDP07339 412 aaPredicted RBP12.8□□□□□ -0.36
SQLE-205ENST00000521232 ADMP35318 185 aa12.8□□□□□ -0.36
SQLE-205ENST00000521232 IZUMO4Q1ZYL8 232 aa12.8□□□□□ -0.36
SQLE-205ENST00000521232 BTNL8Q6UX41 500 aa12.8□□□□□ -0.36
SQLE-205ENST00000521232 GAR1Q9NY12 217 aaKnown RBP12.8□□□□□ -0.36
SQLE-205ENST00000521232 SELENOKQ9Y6D0 94 aa12.8□□□□□ -0.36
SQLE-205ENST00000521232 INS-IGF2F8WCM5 200 aa12.79□□□□□ -0.36
SQLE-205ENST00000521232 CTSGP08311 255 aa12.79□□□□□ -0.36
SQLE-205ENST00000521232 UCP1P25874 307 aa12.79□□□□□ -0.36
SQLE-205ENST00000521232 FCGR2BP31994 310 aaPredicted RBP12.79□□□□□ -0.36
SQLE-205ENST00000521232 ERHP84090 104 aaKnown RBP12.79□□□□□ -0.36
SQLE-205ENST00000521232 IL18Q14116 193 aa12.79□□□□□ -0.36
SQLE-205ENST00000521232 SP6Q3SY56 376 aa12.79□□□□□ -0.36
SQLE-205ENST00000521232 SLC16A13Q7RTY0 426 aa12.79□□□□□ -0.36
SQLE-205ENST00000521232 TXN2Q99757 166 aa12.79□□□□□ -0.36
SQLE-205ENST00000521232 RTBDNQ9BSG5 229 aaPredicted RBP12.79□□□□□ -0.36
SQLE-205ENST00000521232 SLIRPQ9GZT3 109 aaKnown RBP12.79□□□□□ -0.36
SQLE-205ENST00000521232 CEPT1Q9Y6K0 416 aa12.79□□□□□ -0.36
SQLE-205ENST00000521232 RBMY1BA6NDE4 496 aaKnown RBP12.78□□□□□ -0.36
SQLE-205ENST00000521232 RBMY1EA6NEQ0 496 aaKnown RBP12.78□□□□□ -0.36
SQLE-205ENST00000521232 DISC1C4P0D8 188 aa12.78□□□□□ -0.36
SQLE-205ENST00000521232 H3BMQ9 156 aa12.78□□□□□ -0.36
SQLE-205ENST00000521232 K7EMT4 169 aa12.78□□□□□ -0.36
SQLE-205ENST00000521232 RBMY1DP0C7P1 496 aaKnown RBP12.78□□□□□ -0.36
SQLE-205ENST00000521232 AKAIN1P0CW23 69 aa12.78□□□□□ -0.36
SQLE-205ENST00000521232 SURF2Q15527 256 aaPredicted RBP12.78□□□□□ -0.36
SQLE-205ENST00000521232 ANKRD55Q3KP44 614 aa12.78□□□□□ -0.36
SQLE-205ENST00000521232 Q56UQ5 140 aa12.78□□□□□ -0.36
SQLE-205ENST00000521232 FAAP20Q6NZ36 180 aa12.78□□□□□ -0.36
SQLE-205ENST00000521232 UBAC2Q8NBM4 344 aa12.78□□□□□ -0.36
SQLE-205ENST00000521232 MISP3Q96FF7 219 aa12.78□□□□□ -0.36
SQLE-205ENST00000521232 WFDC10AQ9H1F0 79 aa12.78□□□□□ -0.36
SQLE-205ENST00000521232 C5orf66Q9H5L9 145 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms