RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 HRH1P35367 487 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 GPX4P36969 197 aaPredicted RBP2.21□□□□□ -2.06
MCF2-208ENST00000519895 RBMS2Q15434 407 aaKnown RBP2.21□□□□□ -2.06
MCF2-208ENST00000519895 C2orf83Q53S99 150 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 TMEM128Q5BJH2 165 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 NKAPLQ5M9Q1 402 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 SPANXN2Q5MJ10 180 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 PPP1R27Q86WC6 154 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 GPHB5Q86YW7 130 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 ZNF491Q8N8L2 437 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 OR1P1Q8NH06 330 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 CACNG8Q8WXS5 425 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 SEC22AQ96IW7 307 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 P2RX4Q99571 388 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 TMEM222Q9H0R3 208 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 NAA60Q9H7X0 242 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 SIRT7Q9NRC8 400 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 TPSG1Q9NRR2 321 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 NDUFA4L2Q9NRX3 87 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 THYN1Q9P016 225 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 C14orf166Q9Y224 244 aaKnown RBP2.21□□□□□ -2.06
MCF2-208ENST00000519895 KCNIP3Q9Y2W7 256 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 DNAH11Q96DT5 4516 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 A0A1B0GVY2 172 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 PSMB11A5LHX3 300 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 TMEM235A6NFC5 223 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 FABP12A6NFH5 140 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 USP17L23D6RBM5 183 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 I3L521 148 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 SLC31A2O15432 143 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 HPGDSO60760 199 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 RAB3DO95716 219 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 IGKV1D-33P01593 117 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 IGKV1-33P01594 117 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 OR9G9P0C7N8 305 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 CTRB1P17538 263 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 FCGR2CP31995 323 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 PPP1CCP36873 323 aaKnown RBP2.2□□□□□ -2.06
MCF2-208ENST00000519895 MEOX2P50222 304 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 RAB9AP51151 201 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 SPCS3P61009 180 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 ERVK-16P61578 105 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 PRCDQ00LT1 54 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 KLRD1Q13241 179 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 TMEM41BQ5BJD5 291 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 NMSQ5H8A3 153 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 LCE5AQ5TCM9 118 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 CTRB2Q6GPI1 263 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 LHFPL4Q7Z7J7 247 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 S100A7AQ86SG5 101 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 NECAP1Q8NC96 275 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 ARPC1AQ92747 370 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 ZNF503Q96F45 646 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 THAP7Q9BT49 309 aaPredicted RBP2.2□□□□□ -2.06
MCF2-208ENST00000519895 TBC1D24Q9ULP9 559 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 TRAV41A0A0B4J266 112 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 RPS10-NUDT3A0A1W2PQS6 291 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 A6NIN4 97 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 DBX1A6NMT0 343 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 FAM25AB3EWG3 89 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 FAM25CB3EWG5 89 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 FAM25GB3EWG6 89 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 SFT2D2O95562 160 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 IFNA6P05013 189 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 H2AFB1P0C5Y9 115 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 H2AFB2P0C5Z0 115 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 INAFM2P0DMQ5 153 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 SUB1P53999 127 aaKnown RBP eCLIP2.2□□□□□ -2.06
MCF2-208ENST00000519895 OR2B8PP59922 312 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 HSPE1P61604 102 aaKnown RBP2.2□□□□□ -2.06
MCF2-208ENST00000519895 TMEM187Q14656 261 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 KRTAP19-4Q3LI73 84 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 OR4A47Q6IF82 309 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 MOB3BQ86TA1 216 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 LGI3Q8N145 548 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 LYG1Q8N1E2 194 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 FGFRL1Q8N441 504 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 ADAD2Q8NCV1 583 aaKnown RBP2.2□□□□□ -2.06
MCF2-208ENST00000519895 OR51S1Q8NGJ8 323 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 OR52I2Q8NH67 350 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 DIRAS2Q96HU8 199 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 ELOVL1Q9BW60 279 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 OR2D2Q9H210 308 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 HRASLSQ9HDD0 168 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 ZC4H2Q9NQZ6 224 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 CLEC5AQ9NY25 188 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 EHFQ9NZC4 300 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 OR1A1Q9P1Q5 309 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 ABCA1O95477 2261 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 IGLV11-55A0A075B6I3 123 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 A0A1W2PPK0 400 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 M0R1X1 148 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 HSPA12AO43301 675 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 FABP1P07148 127 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 TRAPPC2P0DI81 140 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 TRAPPC2BP0DI82 140 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 VSIG10L2P0DP72 767 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 COX7A1P24310 79 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 DUSP1P28562 367 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 BRWD1-AS2P59051 145 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms