RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 CLEC19AQ6UXS0 136 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 Q6ZR03 302 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 Q6ZVH6 145 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 SELENOHQ8IZQ5 122 aaKnown RBP3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 DYNAPQ8N1N2 210 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 TMEM256Q8N2U0 113 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 DEFB125Q8N687 156 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 OR4M1Q8NGD0 313 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 OR4K5Q8NGD3 323 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 OR6N1Q8NGY5 312 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 SUN5Q8TC36 379 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 ZNF488Q96MN9 340 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 METTL26Q96S19 204 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 SERPINI1Q99574 410 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 GGTLC1Q9BX51 225 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 SHCBP1LQ9BZQ2 653 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 CELA1Q9UNI1 258 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 HILPDAQ9Y5L2 63 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 TMED7-TICAM2A0A0A6YYA0 188 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 IGHV6-1A0A0B4J1U7 121 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 H0Y980 276 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 NDUFB3O43676 98 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 TNFAIP8O95379 198 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 FSTL3O95633 263 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 MRPL3P09001 348 aaKnown RBP3□□□□□ -1.93
HMGB1P23-201ENST00000518743 CD24P25063 80 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 PSMB6P28072 239 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 POLR2IP36954 125 aaKnown RBP3□□□□□ -1.93
HMGB1P23-201ENST00000518743 MAGEA3P43357 314 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 GDI2P50395 445 aaKnown RBP3□□□□□ -1.93
HMGB1P23-201ENST00000518743 PLTPP55058 493 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 TAS2R31P59538 309 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 ZNF181Q2M3W8 571 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 SLC36A2Q495M3 483 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 CLEC12AQ5QGZ9 265 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 HCP5Q6MZN7 132 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 GRINAQ7Z429 371 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 COMMD6Q7Z4G1 85 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 FAM19A1Q7Z5A9 133 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 LINC00596Q86U02 117 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 C15orf53Q8NAA6 179 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 LY6G5BQ8NDX9 201 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 CDC26Q8NHZ8 85 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 ORAOV1Q8WV07 137 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 MRPL20Q9BYC9 149 aaKnown RBP3□□□□□ -1.93
HMGB1P23-201ENST00000518743 C12orf10Q9HB07 376 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 ZNF355PQ9NSJ1 428 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 RBFOX1Q9NWB1 397 aaKnown RBP3□□□□□ -1.93
HMGB1P23-201ENST00000518743 C1orf109Q9NX04 203 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 NKIRAS1Q9NYS0 192 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 ZNF222Q9UK12 451 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 ATP6V1DQ9Y5K8 247 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 PUS1Q9Y606 427 aaKnown RBP eCLIP3□□□□□ -1.93
HMGB1P23-201ENST00000518743 ENPP4Q9Y6X5 453 aa3□□□□□ -1.93
HMGB1P23-201ENST00000518743 IGHV3OR15-7A0A075B7D8 119 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 A0A0A6YYH2 397 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 TMEM72A0PK05 275 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 A6NJ64 397 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 H3BSA7 217 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 CCDC22O60826 627 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 IFNA5P01569 189 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 CDK1P06493 297 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 IL3P08700 152 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 MAGEA6P43360 314 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 CKAP4Q07065 602 aaKnown RBP2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 SKP2Q13309 424 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 TPBGQ13641 420 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 DEFB135Q30KP9 77 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 CDKL4Q5MAI5 379 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 LINC00322Q6ZN03 302 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 NTM-AS1Q6ZSK4 140 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 RIMKLAQ8IXN7 391 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 C11orf53Q8IXP5 236 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 SLC22A24Q8N4F4 322 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 FAM216BQ8N7L0 139 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 OR52P1PQ8NH57 321 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 ZNF414Q96IQ9 312 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 CCL13Q99616 98 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 APOL4Q9BPW4 351 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 KIFC1Q9BW19 673 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 FGF23Q9GZV9 251 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 WFDC10AQ9H1F0 79 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 TMEM100Q9NV29 134 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 COMMD9Q9P000 198 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 OPTCQ9UBM4 332 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 RAB26Q9ULW5 256 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 LRRC42Q9Y546 428 aa2.99□□□□□ -1.93
HMGB1P23-201ENST00000518743 NACAE9PAV3 2078 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 IGKV1-27A0A075B6S5 117 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 IGHV3-72A0A0B4J1Y9 119 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 GNG14A0A1W2PPG7 69 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 OR2AT4A6NND4 320 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 C9JQL5 133 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 PANO1I0J062 215 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 M0QZK8 103 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 CDIPTO14735 213 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 SERPINB7O75635 380 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 IGLV1-51P01701 117 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms