RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 OR10J1P30954 320 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 ETV6P41212 452 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 SSR2P43308 183 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 CSN1S1P47710 185 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 MT4P47944 62 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 KCNJ3P48549 501 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 FXYD2P54710 66 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 CNBPP62633 177 aaKnown RBP-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 RPL30P62888 115 aaKnown RBP-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 SPINK13Q1W4C9 94 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 ACSM3Q53FZ2 586 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 KHDC3LQ587J8 217 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 GLT8D1Q68CQ7 371 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 TTC33Q6PID6 262 aaPredicted RBP-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 LCN15Q6UWW0 184 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 ZNF826PQ6ZT77 177 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 PID1Q7Z2X4 250 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 PLCZ1Q86YW0 608 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 SYS1Q8N2H4 156 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 TMEM251Q8N6I4 163 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 PACRGLQ8N7B6 248 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 LINC00301Q8NCQ3 95 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 TMEM254Q8TBM7 123 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 C11orf40Q8WZ69 217 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 PPCDCQ96CD2 204 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 TLCD1Q96CP7 247 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 CYTH2Q99418 400 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 C6orf62Q9GZU0 229 aaPredicted RBP-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 RAB1BQ9H0U4 201 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 LPAR5Q9H1C0 372 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 OR51B6Q9H340 312 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 PSTPIP2Q9H939 334 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 TMBIM4Q9HC24 238 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 XAGE1AQ9HD64 81 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 TAS2R7Q9NYW3 318 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 MRPL27Q9P0M9 148 aaKnown RBP-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 OPTCQ9UBM4 332 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 RBM7Q9Y580 266 aaKnown RBP-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 SNX10Q9Y5X0 201 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 FLNBO75369 2602 aaKnown RBP-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 KDM5AP29375 1690 aaKnown RBP-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 KDM6AO15550 1401 aaPredicted RBP-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 RIC1Q4ADV7 1423 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 DOCK2Q92608 1830 aa-0.31□□□□□ -2.46
RNU4-49P-201ENST00000516080 KDM3BQ7LBC6 1761 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 MYH3P11055 1940 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 NSD1Q96L73 2696 aaPredicted RBP-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 NUP210Q8TEM1 1887 aaPredicted RBP-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 CECR2Q9BXF3 1484 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 TRAV8-1A0A0A6YYK1 113 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 TRAV3A0A0B4J244 114 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 A0A1W2PPV4 95 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 EFCAB9A8MZ26 197 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 LOC730098B7Z3J9 87 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 F8W1H4 67 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 COPEO14579 308 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 MRASO14807 208 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 LEPROTO15243 131 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 CCL16O15467 120 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 CYB5BO43169 146 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 KDELR3O43731 214 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 UGT2B11O75310 529 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 SC5DO75845 299 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 TCL1BO95988 128 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 PPYP01298 95 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 TNFP01375 233 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 HLA-DQB2P05538 268 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 CD2P06729 351 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 BAALC-AS2P0C853 105 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 HLA-DMBP28068 263 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 CASP1P29466 404 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 S100A7P31151 101 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 RAB13P51153 203 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 DAPP51397 102 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 AP2S1P53680 142 aaPredicted RBP-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 TMEM33P57088 247 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 ROMO1P60602 79 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 SPAG11BQ08648 103 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 STX5Q13190 355 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 C1DQ13901 141 aaKnown RBP-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 PDE6HQ13956 83 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 SNCBQ16143 134 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 C1orf137Q5JT78 98 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 C2orf82Q6UX34 121 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 PATE2Q6UY27 113 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 CASC2Q6XLA1 102 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 ZCCHC23Q6ZST2 131 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 ATP5L2Q7Z4Y8 100 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 DEFB128Q7Z7B8 93 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 MCFD2Q8NI22 146 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 TEX47Q8TBZ9 253 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 LGALS14Q8TCE9 139 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 ZNF431Q8TF32 576 aaPredicted RBP-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 RAB2BQ8WUD1 216 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 RASSF5Q8WWW0 418 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 DNAJC9Q8WXX5 260 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 IFT81Q8WYA0 676 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 ANKRD7Q92527 254 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 PLEKHB2Q96CS7 222 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 MS4A6EQ96DS6 147 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms