RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 OR2C3Q8N628 320 aa8.8□□□□□ -1
SH3RF1-205ENST00000511421 ASCL2Q99929 193 aa8.8□□□□□ -1
SH3RF1-205ENST00000511421 C5orf66Q9H5L9 145 aa8.8□□□□□ -1
SH3RF1-205ENST00000511421 GPR132Q9UNW8 380 aa8.8□□□□□ -1
SH3RF1-205ENST00000511421 A0A0B4J293 547 aa8.79□□□□□ -1
SH3RF1-205ENST00000511421 CCDC160A6NGH7 325 aa8.79□□□□□ -1
SH3RF1-205ENST00000511421 K7EIM0 57 aa8.79□□□□□ -1
SH3RF1-205ENST00000511421 CYB5BO43169 146 aa8.79□□□□□ -1
SH3RF1-205ENST00000511421 GPR183P32249 361 aa8.79□□□□□ -1
SH3RF1-205ENST00000511421 PRCDQ00LT1 54 aa8.79□□□□□ -1
SH3RF1-205ENST00000511421 Q8N402 240 aa8.79□□□□□ -1
SH3RF1-205ENST00000511421 OR51S1Q8NGJ8 323 aa8.79□□□□□ -1
SH3RF1-205ENST00000511421 OR2K2Q8NGT1 345 aa8.79□□□□□ -1
SH3RF1-205ENST00000511421 PRRT1Q99946 306 aa8.79□□□□□ -1
SH3RF1-205ENST00000511421 ZC4H2Q9NQZ6 224 aa8.79□□□□□ -1
SH3RF1-205ENST00000511421 SLC2A8Q9NY64 477 aa8.79□□□□□ -1
SH3RF1-205ENST00000511421 IGHV3-21A0A0B4J1V1 117 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 TMEM213A2RRL7 107 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 A8MWP6 167 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 F8W735 103 aaPredicted RBP8.78□□□□□ -1
SH3RF1-205ENST00000511421 B3GALNT1O75752 331 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 FRMD6-AS1P0C7T7 363 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 FOLR2P14207 255 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 DEFB114Q30KQ6 69 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 CD300EQ496F6 205 aaPredicted RBP8.78□□□□□ -1
SH3RF1-205ENST00000511421 FAM106AQ4KMX7 169 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 LCN12Q6JVE5 192 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 UNQ9165/PRO28630Q6UXU0 137 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 SBSPONQ8IVN8 264 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 ZNF114Q8NC26 417 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 OR1L6Q8NGR2 347 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 OR1P1Q8NH06 330 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 SCARB1Q8WTV0 552 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 GLYATL2Q8WU03 294 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 TMEM222Q9H0R3 208 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 C14orf166Q9Y224 244 aaKnown RBP8.78□□□□□ -1
SH3RF1-205ENST00000511421 V9GYH0 126 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 A0A0G2JRQ6 117 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 ZNF785A8K8V0 405 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 ZNF701M0R085 212 aaPredicted RBP8.78□□□□□ -1
SH3RF1-205ENST00000511421 TGOLN2O43493 480 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 ATG12O94817 140 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 CDS2O95674 445 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 OR5AC1P0C628 307 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 AKR1C2P52895 323 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 TRIM16LQ309B1 348 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 PLET1Q6UQ28 207 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 LHFPL5Q8TAF8 219 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 CACNG8Q8WXS5 425 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 ATP6V0BQ99437 205 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 ZNF436Q9C0F3 470 aaPredicted RBP8.78□□□□□ -1
SH3RF1-205ENST00000511421 NAA60Q9H7X0 242 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 C19orf73Q9NVV2 129 aa8.78□□□□□ -1
SH3RF1-205ENST00000511421 IGHV3-35A0A0C4DH35 117 aa8.77□□□□□ -1.01
SH3RF1-205ENST00000511421 TEX13DA0A0J9YY54 714 aaPredicted RBP8.77□□□□□ -1.01
SH3RF1-205ENST00000511421 ZNF320A2RRD8 509 aa8.77□□□□□ -1.01
SH3RF1-205ENST00000511421 CRYM-AS1A6NIL9 109 aa8.77□□□□□ -1.01
SH3RF1-205ENST00000511421 A8MZ25 164 aa8.77□□□□□ -1.01
SH3RF1-205ENST00000511421 ST8SIA3O43173 380 aa8.77□□□□□ -1.01
SH3RF1-205ENST00000511421 IGHV4-30-4P0DP06 118 aa8.77□□□□□ -1.01
SH3RF1-205ENST00000511421 CBLN1P23435 193 aa8.77□□□□□ -1.01
SH3RF1-205ENST00000511421 KLF9Q13886 244 aaPredicted RBP8.77□□□□□ -1.01
SH3RF1-205ENST00000511421 ZNF79Q15937 498 aa8.77□□□□□ -1.01
SH3RF1-205ENST00000511421 TM4SF20Q53R12 229 aa8.77□□□□□ -1.01
SH3RF1-205ENST00000511421 SPINK9Q5DT21 86 aa8.77□□□□□ -1.01
SH3RF1-205ENST00000511421 Q6ZRM9 215 aa8.77□□□□□ -1.01
SH3RF1-205ENST00000511421 CCDC190Q86UF4 302 aa8.77□□□□□ -1.01
SH3RF1-205ENST00000511421 TRIM63Q969Q1 353 aa8.77□□□□□ -1.01
SH3RF1-205ENST00000511421 C21orf62Q9NYP8 219 aa8.77□□□□□ -1.01
SH3RF1-205ENST00000511421 TECRQ9NZ01 308 aaKnown RBP8.77□□□□□ -1.01
SH3RF1-205ENST00000511421 U3KQK5 164 aa8.77□□□□□ -1.01
SH3RF1-205ENST00000511421 OR2T8A6NH00 312 aa8.76□□□□□ -1.01
SH3RF1-205ENST00000511421 INS-IGF2F8WCM5 200 aa8.76□□□□□ -1.01
SH3RF1-205ENST00000511421 I3L2K1 104 aa8.76□□□□□ -1.01
SH3RF1-205ENST00000511421 C8orf88P0DMB2 117 aa8.76□□□□□ -1.01
SH3RF1-205ENST00000511421 ADMP35318 185 aa8.76□□□□□ -1.01
SH3RF1-205ENST00000511421 SPSB3Q6PJ21 355 aa8.76□□□□□ -1.01
SH3RF1-205ENST00000511421 SELENOHQ8IZQ5 122 aaKnown RBP8.76□□□□□ -1.01
SH3RF1-205ENST00000511421 UXS1Q8NBZ7 420 aa8.76□□□□□ -1.01
SH3RF1-205ENST00000511421 DYNLRB2Q8TF09 96 aa8.76□□□□□ -1.01
SH3RF1-205ENST00000511421 TMEM230Q96A57 120 aa8.76□□□□□ -1.01
SH3RF1-205ENST00000511421 RRNAD1Q96FB5 475 aaKnown RBP8.76□□□□□ -1.01
SH3RF1-205ENST00000511421 BSCL2Q96G97 398 aaPredicted RBP8.76□□□□□ -1.01
SH3RF1-205ENST00000511421 ZNF414Q96IQ9 312 aa8.76□□□□□ -1.01
SH3RF1-205ENST00000511421 CHRDL1Q9BU40 450 aa8.76□□□□□ -1.01
SH3RF1-205ENST00000511421 PLEKHA3Q9HB20 300 aa8.76□□□□□ -1.01
SH3RF1-205ENST00000511421 SCP2D1Q9UJQ7 156 aa8.76□□□□□ -1.01
SH3RF1-205ENST00000511421 STAB2Q8WWQ8 2551 aa8.76□□□□□ -1.01
SH3RF1-205ENST00000511421 S100A5P33763 92 aa8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 ERHP84090 104 aaKnown RBP8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 DHODHQ02127 395 aa8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 AARDQ4LEZ3 155 aa8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 PYDC2Q56P42 97 aa8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 PVRIGQ6DKI7 326 aa8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 FAM219AQ8IW50 185 aa8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 SGPP2Q8IWX5 399 aa8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 TMEM190Q8WZ59 177 aa8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 RBPMSQ93062 196 aaKnown RBP8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 MCUBQ9NWR8 336 aa8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 MLXQ9UH92 298 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms