RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 BVES-AS1Q5T3Y7 98 aa13.12□□□□□ -0.31
SCLT1-208ENST00000506368 SLC25A34Q6PIV7 304 aa13.12□□□□□ -0.31
SCLT1-208ENST00000506368 TMPRSS7Q7RTY8 843 aa13.12□□□□□ -0.31
SCLT1-208ENST00000506368 OR52L2PQ8NGH6 319 aa13.12□□□□□ -0.31
SCLT1-208ENST00000506368 PRR7Q8TB68 274 aa13.12□□□□□ -0.31
SCLT1-208ENST00000506368 NANOS1Q8WY41 292 aaKnown RBP13.12□□□□□ -0.31
SCLT1-208ENST00000506368 GRAMD2BQ96HH9 432 aa13.12□□□□□ -0.31
SCLT1-208ENST00000506368 TRIB1Q96RU8 372 aa13.12□□□□□ -0.31
SCLT1-208ENST00000506368 PMCHL2Q9BQD1 86 aa13.12□□□□□ -0.31
SCLT1-208ENST00000506368 CELSR3Q9NYQ7 3312 aa13.12□□□□□ -0.31
SCLT1-208ENST00000506368 A0A096LPE4 126 aa13.12□□□□□ -0.31
SCLT1-208ENST00000506368 IGHV5-10-1A0A0J9YXX1 117 aa13.12□□□□□ -0.31
SCLT1-208ENST00000506368 A0A1W2PPZ6 126 aa13.12□□□□□ -0.31
SCLT1-208ENST00000506368 LINC00473A8K010 186 aa13.12□□□□□ -0.31
SCLT1-208ENST00000506368 IL11RAQ14626 422 aa13.12□□□□□ -0.31
SCLT1-208ENST00000506368 PSG5Q15238 335 aa13.12□□□□□ -0.31
SCLT1-208ENST00000506368 LCN12Q6JVE5 192 aa13.12□□□□□ -0.31
SCLT1-208ENST00000506368 Q6ZVH6 145 aa13.12□□□□□ -0.31
SCLT1-208ENST00000506368 ATOH7Q8N100 152 aa13.12□□□□□ -0.31
SCLT1-208ENST00000506368 UBALD1Q8TB05 177 aa13.12□□□□□ -0.31
SCLT1-208ENST00000506368 TMEM191AQ9H0A3 160 aa13.12□□□□□ -0.31
SCLT1-208ENST00000506368 PLEKHA3Q9HB20 300 aa13.12□□□□□ -0.31
SCLT1-208ENST00000506368 TNFRSF19Q9NS68 423 aa13.12□□□□□ -0.31
SCLT1-208ENST00000506368 IGLV2-8P01709 118 aa13.11□□□□□ -0.31
SCLT1-208ENST00000506368 SLAQ13239 276 aa13.11□□□□□ -0.31
SCLT1-208ENST00000506368 MED12Q93074 2177 aa13.11□□□□□ -0.31
SCLT1-208ENST00000506368 A0A1W2PQM1 296 aa13.11□□□□□ -0.31
SCLT1-208ENST00000506368 OR4C46A6NHA9 309 aa13.11□□□□□ -0.31
SCLT1-208ENST00000506368 M0QZ24 198 aa13.11□□□□□ -0.31
SCLT1-208ENST00000506368 SPINK4O60575 86 aa13.11□□□□□ -0.31
SCLT1-208ENST00000506368 OR5AL1P0C617 328 aa13.11□□□□□ -0.31
SCLT1-208ENST00000506368 MAJINQ3KP22 176 aa13.11□□□□□ -0.31
SCLT1-208ENST00000506368 MPV17L2Q567V2 206 aa13.11□□□□□ -0.31
SCLT1-208ENST00000506368 SSMEM1Q8WWF3 244 aa13.11□□□□□ -0.31
SCLT1-208ENST00000506368 MBD6Q96DN6 1003 aa13.11□□□□□ -0.31
SCLT1-208ENST00000506368 SERTAD4Q9NUC0 356 aa13.11□□□□□ -0.31
SCLT1-208ENST00000506368 SP1P08047 785 aa13.1□□□□□ -0.31
SCLT1-208ENST00000506368 HIST1H1AQ02539 215 aaPredicted RBP13.1□□□□□ -0.31
SCLT1-208ENST00000506368 FXYD3Q14802 87 aa13.1□□□□□ -0.31
SCLT1-208ENST00000506368 ZNF766Q5HY98 468 aa13.1□□□□□ -0.31
SCLT1-208ENST00000506368 WIPI1Q5MNZ9 446 aaPredicted RBP13.1□□□□□ -0.31
SCLT1-208ENST00000506368 TCF24Q7RTU0 167 aa13.1□□□□□ -0.31
SCLT1-208ENST00000506368 NEUROG1Q92886 237 aa13.1□□□□□ -0.31
SCLT1-208ENST00000506368 NUDT11Q96G61 164 aa13.1□□□□□ -0.31
SCLT1-208ENST00000506368 MRPL32Q9BYC8 188 aaKnown RBP13.1□□□□□ -0.31
SCLT1-208ENST00000506368 WASHC3Q9Y3C0 194 aa13.1□□□□□ -0.31
SCLT1-208ENST00000506368 SOX21Q9Y651 276 aaPredicted RBP13.1□□□□□ -0.31
SCLT1-208ENST00000506368 FREM2Q5SZK8 3169 aa13.1□□□□□ -0.31
SCLT1-208ENST00000506368 COL27A1Q8IZC6 1860 aaPredicted RBP13.09□□□□□ -0.31
SCLT1-208ENST00000506368 IGHV3-9P01782 118 aa13.09□□□□□ -0.31
SCLT1-208ENST00000506368 PSG1P11464 419 aa13.09□□□□□ -0.31
SCLT1-208ENST00000506368 ACP1P24666 158 aa13.09□□□□□ -0.31
SCLT1-208ENST00000506368 TCL1AP56279 114 aa13.09□□□□□ -0.31
SCLT1-208ENST00000506368 RELBQ01201 579 aa13.09□□□□□ -0.31
SCLT1-208ENST00000506368 SPATA31B1PQ5VZV4 182 aa13.09□□□□□ -0.31
SCLT1-208ENST00000506368 BCL2L2Q92843 193 aaPredicted RBP13.09□□□□□ -0.31
SCLT1-208ENST00000506368 C1orf159Q96HA4 380 aa13.09□□□□□ -0.31
SCLT1-208ENST00000506368 GP6Q9HCN6 339 aa13.09□□□□□ -0.31
SCLT1-208ENST00000506368 SPINT2O43291 252 aa13.09□□□□□ -0.31
SCLT1-208ENST00000506368 FOXH1O75593 365 aa13.09□□□□□ -0.31
SCLT1-208ENST00000506368 FOXF2Q12947 444 aa13.09□□□□□ -0.31
SCLT1-208ENST00000506368 WDR86Q86TI4 376 aa13.09□□□□□ -0.31
SCLT1-208ENST00000506368 SLC25A40Q8TBP6 338 aa13.09□□□□□ -0.31
SCLT1-208ENST00000506368 ENY2Q9NPA8 101 aa13.09□□□□□ -0.31
SCLT1-208ENST00000506368 TCF19Q9Y242 345 aa13.09□□□□□ -0.31
SCLT1-208ENST00000506368 GAGE12BA1L429 117 aa13.08□□□□□ -0.32
SCLT1-208ENST00000506368 C21orf140B9A014 251 aa13.08□□□□□ -0.32
SCLT1-208ENST00000506368 NUDT3O95989 172 aa13.08□□□□□ -0.32
SCLT1-208ENST00000506368 MGST1P10620 155 aaKnown RBP13.08□□□□□ -0.32
SCLT1-208ENST00000506368 GPR12P47775 334 aa13.08□□□□□ -0.32
SCLT1-208ENST00000506368 MRPL49Q13405 166 aaKnown RBP13.08□□□□□ -0.32
SCLT1-208ENST00000506368 RNFT1Q5M7Z0 435 aa13.08□□□□□ -0.32
SCLT1-208ENST00000506368 RNASEKQ6P5S7 137 aaKnown RBP13.08□□□□□ -0.32
SCLT1-208ENST00000506368 DHRS13Q6UX07 377 aa13.08□□□□□ -0.32
SCLT1-208ENST00000506368 MIR17HGQ75NE6 70 aa13.08□□□□□ -0.32
SCLT1-208ENST00000506368 OR2Y1Q8NGV0 311 aa13.08□□□□□ -0.32
SCLT1-208ENST00000506368 NABP2Q9BQ15 211 aa13.08□□□□□ -0.32
SCLT1-208ENST00000506368 ZNF503-AS2A6NEH8 195 aa13.08□□□□□ -0.32
SCLT1-208ENST00000506368 TMEM238C9JI98 176 aa13.08□□□□□ -0.32
SCLT1-208ENST00000506368 PSPNO60542 156 aa13.08□□□□□ -0.32
SCLT1-208ENST00000506368 HIST1H1EP10412 219 aaKnown RBP13.08□□□□□ -0.32
SCLT1-208ENST00000506368 GDF1P27539 372 aa13.08□□□□□ -0.32
SCLT1-208ENST00000506368 MFAP2P55001 183 aa13.08□□□□□ -0.32
SCLT1-208ENST00000506368 SEC11AP67812 179 aa13.08□□□□□ -0.32
SCLT1-208ENST00000506368 SLC35B1P78383 322 aa13.08□□□□□ -0.32
SCLT1-208ENST00000506368 NHLRC2Q8NBF2 726 aa13.08□□□□□ -0.32
SCLT1-208ENST00000506368 C15orf61A6NNL5 157 aa13.07□□□□□ -0.32
SCLT1-208ENST00000506368 SYS1-DBNDD2H3BUS1 97 aa13.07□□□□□ -0.32
SCLT1-208ENST00000506368 FCGR3BO75015 233 aa13.07□□□□□ -0.32
SCLT1-208ENST00000506368 DUSP3P51452 185 aaPredicted RBP13.07□□□□□ -0.32
SCLT1-208ENST00000506368 GTF2H5Q6ZYL4 71 aa13.07□□□□□ -0.32
SCLT1-208ENST00000506368 ABHD12Q8N2K0 398 aa13.07□□□□□ -0.32
SCLT1-208ENST00000506368 JPT1Q9UK76 154 aa13.07□□□□□ -0.32
SCLT1-208ENST00000506368 BOKQ9UMX3 212 aaPredicted RBP13.07□□□□□ -0.32
SCLT1-208ENST00000506368 FOXA2Q9Y261 457 aaPredicted RBP13.07□□□□□ -0.32
SCLT1-208ENST00000506368 KLF7O75840 302 aaPredicted RBP13.06□□□□□ -0.32
SCLT1-208ENST00000506368 FTH1P19P0C7X4 201 aa13.06□□□□□ -0.32
SCLT1-208ENST00000506368 SSTR5P35346 364 aa13.06□□□□□ -0.32
SCLT1-208ENST00000506368 TBC1D28Q2M2D7 210 aa13.06□□□□□ -0.32
SCLT1-208ENST00000506368 PSG11Q9UQ72 335 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms