RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 POPDC3Q9HBV1 291 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 OSTCQ9NRP0 149 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 DENND4BO75064 1496 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 PTPRJQ12913 1337 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 ITGB4P16144 1822 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 KMT2EQ8IZD2 1858 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 TECPR2O15040 1411 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 IGKV1OR2-108A0A075B7D4 117 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 IGHV3-73A0A0B4J1V6 119 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 IGKV6D-41A0A0C4DH26 115 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 TLCD2A6NGC4 264 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 BUB1B-PAK6H3BSN5 160 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 TPST1O60507 370 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 CREBL2O60519 120 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 LYZL6O75951 148 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 OR2H2O95918 312 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 IGHV3-30-3P0DP02 117 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 FABP2P12104 132 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 GPX2P18283 190 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 RHOGP84095 191 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 BIKQ13323 160 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 NEDD8Q15843 81 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 LGALS9BQ3B8N2 356 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 LGALS9CQ6DKI2 356 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 C4orf22Q6V702 233 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 HIST3H2BBQ8N257 126 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 LINC00612Q8N6U2 182 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 SPANXA2-OT1Q8N9U9 137 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 OR51T1Q8NGJ9 327 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 OR4C16Q8NGL9 310 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 OR2T10Q8NGZ9 312 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 FGF13Q92913 245 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 KRTAP9-9Q9BYP9 154 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 AICDAQ9GZX7 198 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 C11orf1Q9H5F2 150 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 NAT8Q9UHE5 227 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 U3KQ87 197 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 COL5A2P05997 1499 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 RPRD2Q5VT52 1461 aaKnown RBP2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 CEP152O94986 1710 aa2.37□□□□□ -2.03
HMGB1P22-201ENST00000505315 CEP170Q5SW79 1584 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 AHDC1Q5TGY3 1603 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 A0A087X0T9 212 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 TRAV5A0A0B4J249 113 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 IRGMA1A4Y4 181 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 CYSRT1A8MQ03 144 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 C9JAW5 83 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 H3BQ85 93 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 J3QR89 54 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 TMEM256-PLSCR3K7ERE1 68 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 GGCTO75223 188 aaKnown RBP2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 CST7O76096 145 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 DPM2O94777 84 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 TNFSF15O95150 251 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 NAPSAO96009 420 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 C1QCP02747 245 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 CISD3P0C7P0 127 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 MPC1LP0DKB6 136 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 CCL3P10147 92 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 TMBIM6P55061 237 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 UBE2BP63146 152 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 PLCXD2Q0VAA5 305 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 ZNF816Q0VGE8 651 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 EIF3IQ13347 325 aaKnown RBP2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 LINC00483Q53H64 154 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 NOXRED1Q6NXP6 359 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 C16orf47Q6ZP98 133 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 SDIM1Q6ZPB5 146 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 Q6ZQT7 251 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 OR52R1Q8NGF1 315 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 STAG3L4Q8TBR4 150 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 ZNF714Q96N38 554 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 SCGB3A1Q96QR1 104 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 TM2D3Q9BRN9 247 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 LXNQ9BS40 222 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 XAGE1AQ9HD64 81 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 ASF1BQ9NVP2 202 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 CALML5Q9NZT1 146 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 NAT8BQ9UHF3 227 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 HIGD1AQ9Y241 93 aa2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 KLK5Q9Y337 293 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 BAZ1BQ9UIG0 1483 aaKnown RBP2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 ROCK2O75116 1388 aaKnown RBP2.36□□□□□ -2.03
HMGB1P22-201ENST00000505315 BCL9O00512 1426 aa2.35□□□□□ -2.03
HMGB1P22-201ENST00000505315 MDFIC2A0A1B0GVS7 189 aa2.35□□□□□ -2.03
HMGB1P22-201ENST00000505315 C19orf71A6NCJ1 209 aa2.35□□□□□ -2.03
HMGB1P22-201ENST00000505315 ZNF98A6NK75 572 aa2.35□□□□□ -2.03
HMGB1P22-201ENST00000505315 C17orf51A8MQB3 221 aa2.35□□□□□ -2.03
HMGB1P22-201ENST00000505315 A8MUU9 505 aa2.35□□□□□ -2.03
HMGB1P22-201ENST00000505315 LINC00587B1AMM8 73 aa2.35□□□□□ -2.03
HMGB1P22-201ENST00000505315 FAM25AB3EWG3 89 aa2.35□□□□□ -2.03
HMGB1P22-201ENST00000505315 FAM25CB3EWG5 89 aa2.35□□□□□ -2.03
HMGB1P22-201ENST00000505315 FAM25GB3EWG6 89 aa2.35□□□□□ -2.03
HMGB1P22-201ENST00000505315 H3BT86 120 aa2.35□□□□□ -2.03
HMGB1P22-201ENST00000505315 OVOL1O14753 267 aa2.35□□□□□ -2.03
HMGB1P22-201ENST00000505315 SMIM24O75264 130 aa2.35□□□□□ -2.03
HMGB1P22-201ENST00000505315 NPYP01303 97 aa2.35□□□□□ -2.03
HMGB1P22-201ENST00000505315 IGHV3-53P01767 116 aa2.35□□□□□ -2.03
HMGB1P22-201ENST00000505315 IGHV3-7P01780 117 aa2.35□□□□□ -2.03
HMGB1P22-201ENST00000505315 UCHL1P09936 223 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 197.1 ms