RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 DHFRP00374 187 aa15□□□□□ -0.01
HDAC4-212ENST00000495497 IGHV3-23P01764 117 aa15□□□□□ -0.01
HDAC4-212ENST00000495497 MFAP2P55001 183 aa15□□□□□ -0.01
HDAC4-212ENST00000495497 DHRS2Q13268 280 aa15□□□□□ -0.01
HDAC4-212ENST00000495497 FHL3Q13643 280 aa15□□□□□ -0.01
HDAC4-212ENST00000495497 C15orf32Q32M92 178 aa15□□□□□ -0.01
HDAC4-212ENST00000495497 C4orf46Q504U0 113 aa15□□□□□ -0.01
HDAC4-212ENST00000495497 NMSQ5H8A3 153 aa15□□□□□ -0.01
HDAC4-212ENST00000495497 HSD17B13Q7Z5P4 300 aaPredicted RBP15□□□□□ -0.01
HDAC4-212ENST00000495497 FAM223AQ8IWN6 122 aa15□□□□□ -0.01
HDAC4-212ENST00000495497 NECAP1Q8NC96 275 aa15□□□□□ -0.01
HDAC4-212ENST00000495497 WFDC9Q8NEX5 89 aa15□□□□□ -0.01
HDAC4-212ENST00000495497 OR52B4Q8NGK2 314 aa15□□□□□ -0.01
HDAC4-212ENST00000495497 PDCD10Q9BUL8 212 aa15□□□□□ -0.01
HDAC4-212ENST00000495497 NUDT15Q9NV35 164 aa15□□□□□ -0.01
HDAC4-212ENST00000495497 LINC01619G3V211 115 aa14.99□□□□□ -0.01
HDAC4-212ENST00000495497 TRBV12-3P01733 135 aa14.99□□□□□ -0.01
HDAC4-212ENST00000495497 HOXB5P09067 269 aa14.99□□□□□ -0.01
HDAC4-212ENST00000495497 SLURP1P55000 103 aa14.99□□□□□ -0.01
HDAC4-212ENST00000495497 ZNF616Q08AN1 781 aa14.99□□□□□ -0.01
HDAC4-212ENST00000495497 EXOSC2Q13868 293 aaKnown RBP14.99□□□□□ -0.01
HDAC4-212ENST00000495497 KLK9Q2XQG4 91 aa14.99□□□□□ -0.01
HDAC4-212ENST00000495497 SLC25A24Q6NUK1 477 aa14.99□□□□□ -0.01
HDAC4-212ENST00000495497 ZNF343Q6P1L6 599 aa14.99□□□□□ -0.01
HDAC4-212ENST00000495497 LYG2Q86SG7 212 aa14.99□□□□□ -0.01
HDAC4-212ENST00000495497 OR2C3Q8N628 320 aa14.99□□□□□ -0.01
HDAC4-212ENST00000495497 LRTM2Q8N967 370 aa14.99□□□□□ -0.01
HDAC4-212ENST00000495497 DPF1Q92782 380 aa14.99□□□□□ -0.01
HDAC4-212ENST00000495497 PLEKHA3Q9HB20 300 aa14.99□□□□□ -0.01
HDAC4-212ENST00000495497 KLK9Q9UKQ9 250 aa14.99□□□□□ -0.01
HDAC4-212ENST00000495497 F11RQ9Y624 299 aaKnown RBP14.99□□□□□ -0.01
HDAC4-212ENST00000495497 IGHV3-21A0A0B4J1V1 117 aa14.98□□□□□ -0.01
HDAC4-212ENST00000495497 HSPB1P04792 205 aaKnown RBP14.98□□□□□ -0.01
HDAC4-212ENST00000495497 H2AFB2P0C5Z0 115 aa14.98□□□□□ -0.01
HDAC4-212ENST00000495497 SULT1A3P0DMM9 295 aa14.98□□□□□ -0.01
HDAC4-212ENST00000495497 SULT1A4P0DMN0 295 aa14.98□□□□□ -0.01
HDAC4-212ENST00000495497 IGLL1P15814 213 aa14.98□□□□□ -0.01
HDAC4-212ENST00000495497 HIST1H1BP16401 226 aaKnown RBP14.98□□□□□ -0.01
HDAC4-212ENST00000495497 AARDQ4LEZ3 155 aa14.98□□□□□ -0.01
HDAC4-212ENST00000495497 MFSD2BA6NFX1 497 aa14.97□□□□□ -0.01
HDAC4-212ENST00000495497 G3V4G9 280 aa14.97□□□□□ -0.01
HDAC4-212ENST00000495497 HOXA1P49639 335 aaPredicted RBP14.97□□□□□ -0.01
HDAC4-212ENST00000495497 C11orf87Q6NUJ2 197 aa14.97□□□□□ -0.01
HDAC4-212ENST00000495497 C1QL4Q86Z23 238 aa14.97□□□□□ -0.01
HDAC4-212ENST00000495497 PEF1Q9UBV8 284 aaKnown RBP14.97□□□□□ -0.01
HDAC4-212ENST00000495497 DUXBA0A1W2PPF3 345 aa14.96□□□□□ -0.01
HDAC4-212ENST00000495497 ADAP1O75689 374 aa14.96□□□□□ -0.01
HDAC4-212ENST00000495497 SPCS3P61009 180 aa14.96□□□□□ -0.01
HDAC4-212ENST00000495497 ERHP84090 104 aaKnown RBP14.96□□□□□ -0.01
HDAC4-212ENST00000495497 SMCO1Q147U7 214 aa14.96□□□□□ -0.01
HDAC4-212ENST00000495497 OXLD1Q5BKU9 147 aa14.96□□□□□ -0.01
HDAC4-212ENST00000495497 GGNBP1Q5YKI7 109 aa14.96□□□□□ -0.01
HDAC4-212ENST00000495497 NRARPQ7Z6K4 114 aa14.96□□□□□ -0.01
HDAC4-212ENST00000495497 OR52E5Q8NH55 327 aa14.96□□□□□ -0.01
HDAC4-212ENST00000495497 ENKURQ8TC29 256 aa14.96□□□□□ -0.01
HDAC4-212ENST00000495497 SEC22CQ9BRL7 303 aa14.96□□□□□ -0.01
HDAC4-212ENST00000495497 RANGRFQ9HD47 186 aaPredicted RBP14.96□□□□□ -0.01
HDAC4-212ENST00000495497 MGAM2Q2M2H8 2515 aa14.96□□□□□ -0.02
HDAC4-212ENST00000495497 DUS4LO95620 317 aaKnown RBP14.95□□□□□ -0.02
HDAC4-212ENST00000495497 OR8U8P0C7N1 319 aa14.95□□□□□ -0.02
HDAC4-212ENST00000495497 OR1S1Q8NH92 325 aa14.95□□□□□ -0.02
HDAC4-212ENST00000495497 COQ8AQ8NI60 647 aa14.95□□□□□ -0.02
HDAC4-212ENST00000495497 DCUN1D4Q92564 292 aa14.95□□□□□ -0.02
HDAC4-212ENST00000495497 DLX4Q92988 240 aaPredicted RBP14.95□□□□□ -0.02
HDAC4-212ENST00000495497 ENY2Q9NPA8 101 aa14.95□□□□□ -0.02
HDAC4-212ENST00000495497 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.94□□□□□ -0.02
HDAC4-212ENST00000495497 A0A1B0GU03 582 aa14.94□□□□□ -0.02
HDAC4-212ENST00000495497 CEBPZOSA8MTT3 80 aa14.94□□□□□ -0.02
HDAC4-212ENST00000495497 PPP5D1E7EU14 171 aa14.94□□□□□ -0.02
HDAC4-212ENST00000495497 HOXD3P31249 432 aaPredicted RBP14.94□□□□□ -0.02
HDAC4-212ENST00000495497 OR1P1Q8NH06 330 aa14.94□□□□□ -0.02
HDAC4-212ENST00000495497 EEF1AKMT3Q96AZ1 226 aa14.94□□□□□ -0.02
HDAC4-212ENST00000495497 CCDC140Q96MF4 163 aa14.94□□□□□ -0.02
HDAC4-212ENST00000495497 TMED3Q9Y3Q3 217 aa14.94□□□□□ -0.02
HDAC4-212ENST00000495497 DNAH3Q8TD57 4116 aa14.94□□□□□ -0.02
HDAC4-212ENST00000495497 MPTX1A8MV57 137 aa14.93□□□□□ -0.02
HDAC4-212ENST00000495497 INS-IGF2F8WCM5 200 aa14.93□□□□□ -0.02
HDAC4-212ENST00000495497 SNCAP37840 140 aa14.93□□□□□ -0.02
HDAC4-212ENST00000495497 DEFA1P59665 94 aa14.93□□□□□ -0.02
HDAC4-212ENST00000495497 DEFA3P59666 94 aa14.93□□□□□ -0.02
HDAC4-212ENST00000495497 PDLIM3Q53GG5 364 aaPredicted RBP14.93□□□□□ -0.02
HDAC4-212ENST00000495497 SAMD5Q5TGI4 173 aa14.93□□□□□ -0.02
HDAC4-212ENST00000495497 CLEC19AQ6UXS0 136 aa14.93□□□□□ -0.02
HDAC4-212ENST00000495497 ZNF114Q8NC26 417 aa14.93□□□□□ -0.02
HDAC4-212ENST00000495497 MISP3Q96FF7 219 aa14.93□□□□□ -0.02
HDAC4-212ENST00000495497 RBKSQ9H477 322 aa14.93□□□□□ -0.02
HDAC4-212ENST00000495497 ZC4H2Q9NQZ6 224 aa14.93□□□□□ -0.02
HDAC4-212ENST00000495497 THYN1Q9P016 225 aa14.93□□□□□ -0.02
HDAC4-212ENST00000495497 PIGBOS1A0A0B4J2F0 54 aa14.92□□□□□ -0.02
HDAC4-212ENST00000495497 BMPR1BO00238 502 aa14.92□□□□□ -0.02
HDAC4-212ENST00000495497 CYB5BO43169 146 aa14.92□□□□□ -0.02
HDAC4-212ENST00000495497 PITX3O75364 302 aa14.92□□□□□ -0.02
HDAC4-212ENST00000495497 RNASE2P10153 161 aaKnown RBP14.92□□□□□ -0.02
HDAC4-212ENST00000495497 TNFRSF9Q07011 255 aa14.92□□□□□ -0.02
HDAC4-212ENST00000495497 DUSP18Q8NEJ0 188 aa14.92□□□□□ -0.02
HDAC4-212ENST00000495497 OR1L6Q8NGR2 347 aa14.92□□□□□ -0.02
HDAC4-212ENST00000495497 MITD1Q8WV92 249 aa14.92□□□□□ -0.02
HDAC4-212ENST00000495497 RCC1LQ96I51 464 aaKnown RBP14.92□□□□□ -0.02
HDAC4-212ENST00000495497 HEYLQ9NQ87 328 aaPredicted RBP14.92□□□□□ -0.02
HDAC4-212ENST00000495497 HSPB7Q9UBY9 170 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms