RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 FMN2Q9NZ56 1722 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 COL4A6Q14031 1691 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 MYO3AQ8NEV4 1616 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 NRXN1Q9ULB1 1477 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 A0A087WUU8 490 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 TMED7-TICAM2A0A0A6YYA0 188 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 A0A1B0GVG6 124 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 A0A1B0GW54 56 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 C9JCJ5 164 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 M0QZ92 97 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 TYMSP04818 313 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 BPGMP07738 259 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 IL3P08700 152 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 ALDH3A1P30838 453 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 MAGEA2P43356 314 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 SLCO1A2P46721 670 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 BLVRAP53004 296 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 TMEM258P61165 79 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 FKBP1AP62942 108 aaKnown RBP0.76□□□□□ -2.29
ITGB1-216ENST00000493758 AKR1C1Q04828 323 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 PPP1R1AQ13522 171 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 COTL1Q14019 142 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 BATFQ16520 125 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 SLC36A2Q495M3 483 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 OGFRL1Q5TC84 451 aaPredicted RBP0.76□□□□□ -2.29
ITGB1-216ENST00000493758 FAM78BQ5VT40 261 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 C5orf46Q6UWT4 87 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 HIST2H3AQ71DI3 136 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 COMMD7Q86VX2 200 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 LRRC28Q86X40 367 aaPredicted RBP0.76□□□□□ -2.29
ITGB1-216ENST00000493758 DEFB123Q8N688 67 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 PACRGLQ8N7B6 248 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 OR8B12Q8NGG6 310 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 PIGXQ8TBF5 258 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 HAVCR2Q8TDQ0 301 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 SMCR5Q8TEV8 140 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 RAB2BQ8WUD1 216 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 TMA16Q96EY4 203 aaKnown RBP0.76□□□□□ -2.29
ITGB1-216ENST00000493758 USE1Q9NZ43 259 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 DKKL1Q9UK85 242 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 KLK5Q9Y337 293 aaPredicted RBP0.76□□□□□ -2.29
ITGB1-216ENST00000493758 TLN2Q9Y4G6 2542 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 HIVEP3Q5T1R4 2406 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 RTTNQ86VV8 2226 aa0.76□□□□□ -2.29
ITGB1-216ENST00000493758 NEBP20929 6669 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 RICTORQ6R327 1708 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 ZC3H13Q5T200 1668 aaKnown RBP0.75□□□□□ -2.29
ITGB1-216ENST00000493758 TNRC6CQ9HCJ0 1690 aaKnown RBP0.75□□□□□ -2.29
ITGB1-216ENST00000493758 THSD7AQ9UPZ6 1657 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 WDR97A6NE52 1622 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 CSMD3Q7Z407 3707 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 MAGI1Q96QZ7 1491 aaPredicted RBP0.75□□□□□ -2.29
ITGB1-216ENST00000493758 WDR7Q9Y4E6 1490 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 NUP160Q12769 1436 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 PRG4Q92954 1404 aaPredicted RBP0.75□□□□□ -2.29
ITGB1-216ENST00000493758 TRAPPC8Q9Y2L5 1435 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 FRAS1Q86XX4 4008 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 IGHV3-64A0A075B6Q5 118 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 TMSB15BA0A087X1C1 80 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 A8MUN3 132 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 LRRN3E7EW58 273 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 F8W036 122 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 COX7A2LO14548 114 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 SLC16A4O15374 487 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 CREBL2O60519 120 aaPredicted RBP0.75□□□□□ -2.29
ITGB1-216ENST00000493758 DEXIO95424 95 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 APOMO95445 188 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 HLA-DRAP01903 254 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 C1QCP02747 245 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 C8orf88P0DMB2 117 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 COX5BP10606 129 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 MYL12AP19105 171 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 PSMB8P28062 276 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 CA5AP35218 305 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 G6PCP35575 357 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 CCR2P41597 374 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 HAAOP46952 286 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 EMP1P54849 157 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 PRB3Q04118 309 aaPredicted RBP0.75□□□□□ -2.29
ITGB1-216ENST00000493758 MLLT11Q13015 90 aaPredicted RBP0.75□□□□□ -2.29
ITGB1-216ENST00000493758 MIAQ16674 131 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 LGALS9BQ3B8N2 356 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 SBSNQ6UWP8 590 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 ZNF705AQ6ZN79 300 aaPredicted RBP0.75□□□□□ -2.29
ITGB1-216ENST00000493758 TMEM161BQ8NDZ6 487 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 OR51T1Q8NGJ9 327 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 OR2T27Q8NH04 317 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 ZNF675Q8TD23 568 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 SLC7A6Q92536 515 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 RNASE6Q93091 150 aaKnown RBP0.75□□□□□ -2.29
ITGB1-216ENST00000493758 GNPNAT1Q96EK6 184 aaPredicted RBP0.75□□□□□ -2.29
ITGB1-216ENST00000493758 CCL13Q99616 98 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 LLPHQ9BRT6 129 aaKnown RBP0.75□□□□□ -2.29
ITGB1-216ENST00000493758 DOHHQ9BU89 302 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 TTTY13Q9BZ97 58 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 OR51I2Q9H344 312 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 MAP1LC3AQ9H492 121 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 FAM96AQ9H5X1 160 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 HRASLSQ9HDD0 168 aa0.75□□□□□ -2.29
ITGB1-216ENST00000493758 C8orf4Q9NR00 106 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms