RNA–Protein interactions for RNA: ENST00000491139.5

NELFE-210, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-210ENST00000491139 ANAPC10Q9UM13 185 aa15.25■□□□□ 0.03
NELFE-210ENST00000491139 RPL5P46777 297 aaKnown RBP15.24■□□□□ 0.03
NELFE-210ENST00000491139 TMEM69Q5SWH9 247 aa15.24■□□□□ 0.03
NELFE-210ENST00000491139 SLC25A24Q6NUK1 477 aa15.24■□□□□ 0.03
NELFE-210ENST00000491139 HOGA1Q86XE5 327 aa15.24■□□□□ 0.03
NELFE-210ENST00000491139 SPAG16Q8N0X2 631 aa15.24■□□□□ 0.03
NELFE-210ENST00000491139 GDPD1Q8N9F7 314 aa15.24■□□□□ 0.03
NELFE-210ENST00000491139 CHRDL1Q9BU40 450 aa15.24■□□□□ 0.03
NELFE-210ENST00000491139 QTRT1Q9BXR0 403 aaKnown RBP15.24■□□□□ 0.03
NELFE-210ENST00000491139 SMPXQ9UHP9 88 aa15.24■□□□□ 0.03
NELFE-210ENST00000491139 TRAV3A0A0B4J244 114 aa15.23■□□□□ 0.03
NELFE-210ENST00000491139 C15orf62A8K5M9 175 aa15.23■□□□□ 0.03
NELFE-210ENST00000491139 C11orf94C9JXX5 98 aa15.23■□□□□ 0.03
NELFE-210ENST00000491139 UPK2O00526 184 aa15.23■□□□□ 0.03
NELFE-210ENST00000491139 TNFSF12O43508 249 aa15.23■□□□□ 0.03
NELFE-210ENST00000491139 TMBIM6P55061 237 aa15.23■□□□□ 0.03
NELFE-210ENST00000491139 OR10W1Q8NGF6 305 aa15.23■□□□□ 0.03
NELFE-210ENST00000491139 ATP6V0BQ99437 205 aa15.23■□□□□ 0.03
NELFE-210ENST00000491139 RNF2Q99496 336 aa15.23■□□□□ 0.03
NELFE-210ENST00000491139 C21orf62Q9NYP8 219 aa15.23■□□□□ 0.03
NELFE-210ENST00000491139 RBFOX2O43251 390 aaKnown RBP eCLIP15.22■□□□□ 0.03
NELFE-210ENST00000491139 OR13C7P0DN81 318 aa15.22■□□□□ 0.03
NELFE-210ENST00000491139 ZNF182P17025 639 aaPredicted RBP15.22■□□□□ 0.03
NELFE-210ENST00000491139 TFPI2P48307 235 aa15.22■□□□□ 0.03
NELFE-210ENST00000491139 TAS2R31P59538 309 aa15.22■□□□□ 0.03
NELFE-210ENST00000491139 TAS2R20P59543 309 aa15.22■□□□□ 0.03
NELFE-210ENST00000491139 THOC7Q6I9Y2 204 aaKnown RBP15.22■□□□□ 0.03
NELFE-210ENST00000491139 BEST4Q8NFU0 473 aa15.22■□□□□ 0.03
NELFE-210ENST00000491139 DNAH6Q9C0G6 4158 aa15.22■□□□□ 0.03
NELFE-210ENST00000491139 IGHV3-21A0A0B4J1V1 117 aa15.21■□□□□ 0.03
NELFE-210ENST00000491139 CA1P00915 261 aaPredicted RBP15.21■□□□□ 0.03
NELFE-210ENST00000491139 EIF4EP06730 217 aaKnown RBP15.21■□□□□ 0.03
NELFE-210ENST00000491139 SERPINE2P07093 398 aa15.21■□□□□ 0.03
NELFE-210ENST00000491139 NQO2P16083 231 aa15.21■□□□□ 0.03
NELFE-210ENST00000491139 TMEM187Q14656 261 aa15.21■□□□□ 0.03
NELFE-210ENST00000491139 MSMO1Q15800 293 aa15.21■□□□□ 0.03
NELFE-210ENST00000491139 POU2AF1Q16633 256 aa15.21■□□□□ 0.03
NELFE-210ENST00000491139 MZT2AQ6P582 158 aa15.21■□□□□ 0.03
NELFE-210ENST00000491139 HSD17B13Q7Z5P4 300 aaPredicted RBP15.21■□□□□ 0.03
NELFE-210ENST00000491139 UBAC2Q8NBM4 344 aa15.21■□□□□ 0.03
NELFE-210ENST00000491139 SCARB1Q8WTV0 552 aa15.21■□□□□ 0.03
NELFE-210ENST00000491139 RHPN1-AS1Q9BWJ2 59 aa15.21■□□□□ 0.03
NELFE-210ENST00000491139 CCL28Q9NRJ3 127 aa15.21■□□□□ 0.03
NELFE-210ENST00000491139 IGKV3-7A0A075B6H7 116 aa15.2■□□□□ 0.02
NELFE-210ENST00000491139 A0A1B0GVY2 172 aa15.2■□□□□ 0.02
NELFE-210ENST00000491139 CHEK1O14757 476 aa15.2■□□□□ 0.02
NELFE-210ENST00000491139 HPRT1P00492 218 aa15.2■□□□□ 0.02
NELFE-210ENST00000491139 FGF2P09038 288 aa15.2■□□□□ 0.02
NELFE-210ENST00000491139 TRAPPC2P0DI81 140 aa15.2■□□□□ 0.02
NELFE-210ENST00000491139 TRAPPC2BP0DI82 140 aa15.2■□□□□ 0.02
NELFE-210ENST00000491139 WT1-ASQ06250 92 aa15.2■□□□□ 0.02
NELFE-210ENST00000491139 SECTM1Q8WVN6 248 aa15.2■□□□□ 0.02
NELFE-210ENST00000491139 SCPEP1Q9HB40 452 aa15.2■□□□□ 0.02
NELFE-210ENST00000491139 TMEM140Q9NV12 185 aa15.2■□□□□ 0.02
NELFE-210ENST00000491139 CCDC59Q9P031 241 aaKnown RBP15.2■□□□□ 0.02
NELFE-210ENST00000491139 COMMD3Q9UBI1 195 aa15.2■□□□□ 0.02
NELFE-210ENST00000491139 PKHD1P08F94 4074 aa15.19■□□□□ 0.02
NELFE-210ENST00000491139 IGHV7-4-1A0A0J9YVY3 117 aa15.19■□□□□ 0.02
NELFE-210ENST00000491139 SULT1C2O00338 296 aa15.19■□□□□ 0.02
NELFE-210ENST00000491139 ARPC4P59998 168 aa15.19■□□□□ 0.02
NELFE-210ENST00000491139 CATR1Q13166 79 aa15.19■□□□□ 0.02
NELFE-210ENST00000491139 Q56UQ5 140 aa15.19■□□□□ 0.02
NELFE-210ENST00000491139 CLVS1Q8IUQ0 354 aaPredicted RBP15.19■□□□□ 0.02
NELFE-210ENST00000491139 TMEM116Q8NCL8 245 aa15.19■□□□□ 0.02
NELFE-210ENST00000491139 ZBTB34Q8NCN2 500 aa15.19■□□□□ 0.02
NELFE-210ENST00000491139 DMBX1Q8NFW5 382 aa15.19■□□□□ 0.02
NELFE-210ENST00000491139 HRH4Q9H3N8 390 aa15.19■□□□□ 0.02
NELFE-210ENST00000491139 F8W735 103 aaPredicted RBP15.18■□□□□ 0.02
NELFE-210ENST00000491139 NAT1P18440 290 aa15.18■□□□□ 0.02
NELFE-210ENST00000491139 F11RQ9Y624 299 aaKnown RBP15.18■□□□□ 0.02
NELFE-210ENST00000491139 IGHV3-49A0A0A0MS15 119 aa15.17■□□□□ 0.02
NELFE-210ENST00000491139 TEX50A0A1B0GTY4 177 aa15.17■□□□□ 0.02
NELFE-210ENST00000491139 NOL3O60936 208 aaKnown RBP15.17■□□□□ 0.02
NELFE-210ENST00000491139 CTSGP08311 255 aa15.17■□□□□ 0.02
NELFE-210ENST00000491139 ELK1P19419 428 aa15.17■□□□□ 0.02
NELFE-210ENST00000491139 FCGR2CP31995 323 aa15.17■□□□□ 0.02
NELFE-210ENST00000491139 SPCS2Q15005 226 aa15.17■□□□□ 0.02
NELFE-210ENST00000491139 GBGT1Q8N5D6 347 aa15.17■□□□□ 0.02
NELFE-210ENST00000491139 OR5AP2Q8NGF4 316 aa15.17■□□□□ 0.02
NELFE-210ENST00000491139 OR1L8Q8NGR8 309 aa15.17■□□□□ 0.02
NELFE-210ENST00000491139 PLEKHA2Q9HB19 425 aa15.17■□□□□ 0.02
NELFE-210ENST00000491139 IFT46Q9NQC8 304 aa15.17■□□□□ 0.02
NELFE-210ENST00000491139 FAT2Q9NYQ8 4349 aa15.16■□□□□ 0.02
NELFE-210ENST00000491139 SMIM31A0A1B0GVY4 71 aa15.16■□□□□ 0.02
NELFE-210ENST00000491139 C15orf61A6NNL5 157 aa15.16■□□□□ 0.02
NELFE-210ENST00000491139 K7EIM0 57 aa15.16■□□□□ 0.02
NELFE-210ENST00000491139 HPGDSO60760 199 aa15.16■□□□□ 0.02
NELFE-210ENST00000491139 YIF1AO95070 293 aa15.16■□□□□ 0.02
NELFE-210ENST00000491139 PRSS3P35030 304 aa15.16■□□□□ 0.02
NELFE-210ENST00000491139 PAFAH1B2P68402 229 aa15.16■□□□□ 0.02
NELFE-210ENST00000491139 RELQ04864 619 aaPredicted RBP15.16■□□□□ 0.02
NELFE-210ENST00000491139 DYNC2LI1Q8TCX1 351 aa15.16■□□□□ 0.02
NELFE-210ENST00000491139 GPX8Q8TED1 209 aa15.16■□□□□ 0.02
NELFE-210ENST00000491139 LSM10Q969L4 123 aaKnown RBP15.16■□□□□ 0.02
NELFE-210ENST00000491139 HINT2Q9BX68 163 aa15.16■□□□□ 0.02
NELFE-210ENST00000491139 SLC5A7Q9GZV3 580 aa15.16■□□□□ 0.02
NELFE-210ENST00000491139 NUPL2O15504 423 aaKnown RBP15.15■□□□□ 0.02
NELFE-210ENST00000491139 PPYP01298 95 aa15.15■□□□□ 0.02
NELFE-210ENST00000491139 PTHLHP12272 177 aa15.15■□□□□ 0.02
NELFE-210ENST00000491139 HLA-DMBP28068 263 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms