RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 PNRC1Q12796 327 aaPredicted RBP5.17□□□□□ -1.58
SF3A3-208ENST00000489537 FAM74A3Q4VXF1 159 aa5.17□□□□□ -1.58
SF3A3-208ENST00000489537 SOHLH1Q5JUK2 328 aa5.17□□□□□ -1.58
SF3A3-208ENST00000489537 C10orf91Q5T1B1 145 aa5.17□□□□□ -1.58
SF3A3-208ENST00000489537 TEPPQ6URK8 271 aa5.17□□□□□ -1.58
SF3A3-208ENST00000489537 SSX9Q7RTT3 188 aa5.17□□□□□ -1.58
SF3A3-208ENST00000489537 TMEM144Q7Z5S9 345 aa5.17□□□□□ -1.58
SF3A3-208ENST00000489537 BPIFCQ8NFQ6 507 aa5.17□□□□□ -1.58
SF3A3-208ENST00000489537 SLC35E1Q96K37 410 aa5.17□□□□□ -1.58
SF3A3-208ENST00000489537 NABP2Q9BQ15 211 aa5.17□□□□□ -1.58
SF3A3-208ENST00000489537 NPCDR1Q9BY65 106 aa5.17□□□□□ -1.58
SF3A3-208ENST00000489537 C1RLQ9NZP8 487 aa5.17□□□□□ -1.58
SF3A3-208ENST00000489537 WDR83OSQ9Y284 106 aa5.17□□□□□ -1.58
SF3A3-208ENST00000489537 POLR3KQ9Y2Y1 108 aaPredicted RBP5.17□□□□□ -1.58
SF3A3-208ENST00000489537 TBL2Q9Y4P3 447 aaKnown RBP5.17□□□□□ -1.58
SF3A3-208ENST00000489537 ARL2-SNX15V9GYD0 113 aa5.17□□□□□ -1.58
SF3A3-208ENST00000489537 CCDC168Q8NDH2 2452 aa5.17□□□□□ -1.58
SF3A3-208ENST00000489537 UBE2L5PA0A1B0GUS4 154 aa5.16□□□□□ -1.58
SF3A3-208ENST00000489537 A0A1W2PPV4 95 aa5.16□□□□□ -1.58
SF3A3-208ENST00000489537 TMEM250H0YL14 139 aa5.16□□□□□ -1.58
SF3A3-208ENST00000489537 OVOL3O00110 214 aa5.16□□□□□ -1.58
SF3A3-208ENST00000489537 SOD3P08294 240 aa5.16□□□□□ -1.58
SF3A3-208ENST00000489537 SNRNP70P08621 437 aaKnown RBP5.16□□□□□ -1.58
SF3A3-208ENST00000489537 FBP1P09467 338 aa5.16□□□□□ -1.58
SF3A3-208ENST00000489537 SAA1P0DJI8 122 aaPredicted RBP5.16□□□□□ -1.58
SF3A3-208ENST00000489537 BRS3P32247 399 aa5.16□□□□□ -1.58
SF3A3-208ENST00000489537 RPL29P47914 159 aaKnown RBP5.16□□□□□ -1.58
SF3A3-208ENST00000489537 TAS2R45P59539 299 aa5.16□□□□□ -1.58
SF3A3-208ENST00000489537 DEFA5Q01523 94 aa5.16□□□□□ -1.58
SF3A3-208ENST00000489537 HNF4GQ14541 408 aa5.16□□□□□ -1.58
SF3A3-208ENST00000489537 RHEBQ15382 184 aa5.16□□□□□ -1.58
SF3A3-208ENST00000489537 FBLN7Q53RD9 439 aa5.16□□□□□ -1.58
SF3A3-208ENST00000489537 ZNF506Q5JVG8 444 aa5.16□□□□□ -1.58
SF3A3-208ENST00000489537 PNKDQ8N490 385 aa5.16□□□□□ -1.58
SF3A3-208ENST00000489537 OR10G9Q8NGN4 311 aa5.16□□□□□ -1.58
SF3A3-208ENST00000489537 OR10G7Q8NGN6 311 aa5.16□□□□□ -1.58
SF3A3-208ENST00000489537 PCNPQ8WW12 178 aaKnown RBP5.16□□□□□ -1.58
SF3A3-208ENST00000489537 LINC00052Q96N35 136 aa5.16□□□□□ -1.58
SF3A3-208ENST00000489537 PIMREGQ9BSJ6 248 aa5.16□□□□□ -1.58
SF3A3-208ENST00000489537 MRPL20Q9BYC9 149 aaKnown RBP5.16□□□□□ -1.58
SF3A3-208ENST00000489537 NKX6-2Q9C056 277 aaPredicted RBP5.16□□□□□ -1.58
SF3A3-208ENST00000489537 UBTD1Q9HAC8 227 aa5.16□□□□□ -1.58
SF3A3-208ENST00000489537 NDUFA4L2Q9NRX3 87 aa5.16□□□□□ -1.58
SF3A3-208ENST00000489537 DCAF16Q9NXF7 216 aa5.16□□□□□ -1.58
SF3A3-208ENST00000489537 ONECUT1Q9UBC0 465 aa5.16□□□□□ -1.58
SF3A3-208ENST00000489537 SPG11Q96JI7 2443 aa5.15□□□□□ -1.58
SF3A3-208ENST00000489537 TANC2Q9HCD6 1990 aa5.15□□□□□ -1.58
SF3A3-208ENST00000489537 IGHV1-3A0A0C4DH29 117 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 TEX50A0A1B0GTY4 177 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 A0A1W2PPE3 182 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 MAP1LC3B2A6NCE7 125 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 C15orf62A8K5M9 175 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 PMS2P5A8MQ11 134 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 SEC14L6B5MCN3 397 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 MMP23AO75900 390 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 NXPH3O95157 252 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 IGHV2-5P01817 119 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 SFTA3P0C7M3 94 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 MDKP21741 143 aaPredicted RBP5.15□□□□□ -1.59
SF3A3-208ENST00000489537 GATA3P23771 443 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 CDC34P49427 236 aaPredicted RBP5.15□□□□□ -1.59
SF3A3-208ENST00000489537 RHOBP62745 196 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 AKR1C1Q04828 323 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 IZUMO4Q1ZYL8 232 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 BSXQ3C1V8 233 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 FFAR4Q5NUL3 377 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 DUX4L9Q6RFH8 374 aaPredicted RBP5.15□□□□□ -1.59
SF3A3-208ENST00000489537 CLEC2AQ6UVW9 174 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 MOB3BQ86TA1 216 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 C11orf42Q8N5U0 333 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 ZNF114Q8NC26 417 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 STXBP6Q8NFX7 210 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 OR2T10Q8NGZ9 312 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 LEAP2Q969E1 77 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 MALSU1Q96EH3 234 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 BTF3L4Q96K17 158 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 TMEM68Q96MH6 324 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 PFDN5Q99471 154 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 SSX3Q99909 188 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 NIPSNAP3BQ9BS92 247 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 MAP1LC3BQ9GZQ8 125 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 SH3BGRL3Q9H299 93 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 THYN1Q9P016 225 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 VAX2Q9UIW0 290 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 AKAP6Q13023 2319 aa5.15□□□□□ -1.59
SF3A3-208ENST00000489537 KIAA2026Q5HYC2 2103 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 CXorf65A6NEN9 183 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 PDE6DO43924 150 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 CLN5O75503 358 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 CXorf1O96002 111 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 MOSP00540 346 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 IGHV3-7P01780 117 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 IGKV1-16P04430 117 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 FAM106CPP0CH98 169 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 BCL2P10415 239 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 PAX1P15863 534 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 PAX6P26367 422 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 RPL27AP46776 148 aaKnown RBP5.14□□□□□ -1.59
SF3A3-208ENST00000489537 UBE2E1P51965 193 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 BPIFB3P59826 476 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms