RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 CACNG8Q8WXS5 425 aa9.76□□□□□ -0.85
HDAC1-209ENST00000484305 SOSTQ9BQB4 213 aa9.76□□□□□ -0.85
HDAC1-209ENST00000484305 NXF2Q9GZY0 626 aaKnown RBP9.76□□□□□ -0.85
HDAC1-209ENST00000484305 COPZ2Q9P299 210 aa9.76□□□□□ -0.85
HDAC1-209ENST00000484305 RABL2AQ9UBK7 228 aaPredicted RBP9.76□□□□□ -0.85
HDAC1-209ENST00000484305 RABL2BQ9UNT1 228 aa9.76□□□□□ -0.85
HDAC1-209ENST00000484305 IGHV3-35A0A0C4DH35 117 aa9.75□□□□□ -0.85
HDAC1-209ENST00000484305 DISC1C4P0D8 188 aa9.75□□□□□ -0.85
HDAC1-209ENST00000484305 CYB5BO43169 146 aa9.75□□□□□ -0.85
HDAC1-209ENST00000484305 GSTZ1O43708 216 aaPredicted RBP9.75□□□□□ -0.85
HDAC1-209ENST00000484305 CTSDP07339 412 aaPredicted RBP9.75□□□□□ -0.85
HDAC1-209ENST00000484305 P0C879 139 aa9.75□□□□□ -0.85
HDAC1-209ENST00000484305 AKAIN1P0CW23 69 aa9.75□□□□□ -0.85
HDAC1-209ENST00000484305 CBLN1P23435 193 aa9.75□□□□□ -0.85
HDAC1-209ENST00000484305 HSPE1P61604 102 aaKnown RBP9.75□□□□□ -0.85
HDAC1-209ENST00000484305 UNQ9165/PRO28630Q6UXU0 137 aa9.75□□□□□ -0.85
HDAC1-209ENST00000484305 CCDC71LQ8N9Z2 235 aa9.75□□□□□ -0.85
HDAC1-209ENST00000484305 OR2K2Q8NGT1 345 aa9.75□□□□□ -0.85
HDAC1-209ENST00000484305 RTBDNQ9BSG5 229 aaPredicted RBP9.75□□□□□ -0.85
HDAC1-209ENST00000484305 C19orf73Q9NVV2 129 aa9.75□□□□□ -0.85
HDAC1-209ENST00000484305 SELENOKQ9Y6D0 94 aa9.75□□□□□ -0.85
HDAC1-209ENST00000484305 A0A0B4J293 547 aa9.74□□□□□ -0.85
HDAC1-209ENST00000484305 ANKRD20A5PA0PJZ0 165 aa9.74□□□□□ -0.85
HDAC1-209ENST00000484305 TMEM213A2RRL7 107 aa9.74□□□□□ -0.85
HDAC1-209ENST00000484305 FABP12A6NFH5 140 aa9.74□□□□□ -0.85
HDAC1-209ENST00000484305 OR2T8A6NH00 312 aa9.74□□□□□ -0.85
HDAC1-209ENST00000484305 ZNF785A8K8V0 405 aa9.74□□□□□ -0.85
HDAC1-209ENST00000484305 A8MWP6 167 aa9.74□□□□□ -0.85
HDAC1-209ENST00000484305 F8W735 103 aaPredicted RBP9.74□□□□□ -0.85
HDAC1-209ENST00000484305 K7EIM0 57 aa9.74□□□□□ -0.85
HDAC1-209ENST00000484305 TGOLN2O43493 480 aa9.74□□□□□ -0.85
HDAC1-209ENST00000484305 UCP1P25874 307 aa9.74□□□□□ -0.85
HDAC1-209ENST00000484305 AKR1C2P52895 323 aa9.74□□□□□ -0.85
HDAC1-209ENST00000484305 PRCDQ00LT1 54 aa9.74□□□□□ -0.85
HDAC1-209ENST00000484305 TRIM16LQ309B1 348 aa9.74□□□□□ -0.85
HDAC1-209ENST00000484305 TM4SF20Q53R12 229 aa9.74□□□□□ -0.85
HDAC1-209ENST00000484305 SPINK9Q5DT21 86 aa9.74□□□□□ -0.85
HDAC1-209ENST00000484305 PLET1Q6UQ28 207 aa9.74□□□□□ -0.85
HDAC1-209ENST00000484305 GTSCR1Q86UQ5 136 aa9.74□□□□□ -0.85
HDAC1-209ENST00000484305 SGPP2Q8IWX5 399 aa9.74□□□□□ -0.85
HDAC1-209ENST00000484305 OR2C3Q8N628 320 aa9.74□□□□□ -0.85
HDAC1-209ENST00000484305 OR51S1Q8NGJ8 323 aa9.74□□□□□ -0.85
HDAC1-209ENST00000484305 DYNLRB2Q8TF09 96 aa9.74□□□□□ -0.85
HDAC1-209ENST00000484305 SCARB1Q8WTV0 552 aa9.74□□□□□ -0.85
HDAC1-209ENST00000484305 WWC2-AS2Q96NR7 200 aa9.74□□□□□ -0.85
HDAC1-209ENST00000484305 C5orf66Q9H5L9 145 aa9.74□□□□□ -0.85
HDAC1-209ENST00000484305 RSL24D1Q9UHA3 163 aaKnown RBP9.74□□□□□ -0.85
HDAC1-209ENST00000484305 A0A0G2JRQ6 117 aa9.73□□□□□ -0.85
HDAC1-209ENST00000484305 CCDC160A6NGH7 325 aa9.73□□□□□ -0.85
HDAC1-209ENST00000484305 A8MZ25 164 aa9.73□□□□□ -0.85
HDAC1-209ENST00000484305 SURF2Q15527 256 aaPredicted RBP9.73□□□□□ -0.85
HDAC1-209ENST00000484305 UXS1Q8NBZ7 420 aa9.73□□□□□ -0.85
HDAC1-209ENST00000484305 OR1L6Q8NGR2 347 aa9.73□□□□□ -0.85
HDAC1-209ENST00000484305 OR1P1Q8NH06 330 aa9.73□□□□□ -0.85
HDAC1-209ENST00000484305 WDR89Q96FK6 387 aaPredicted RBP9.73□□□□□ -0.85
HDAC1-209ENST00000484305 CHRDL1Q9BU40 450 aa9.73□□□□□ -0.85
HDAC1-209ENST00000484305 ZNF436Q9C0F3 470 aaPredicted RBP9.73□□□□□ -0.85
HDAC1-209ENST00000484305 TMEM222Q9H0R3 208 aa9.73□□□□□ -0.85
HDAC1-209ENST00000484305 RBM38Q9H0Z9 239 aaKnown RBP9.73□□□□□ -0.85
HDAC1-209ENST00000484305 C21orf62Q9NYP8 219 aa9.73□□□□□ -0.85
HDAC1-209ENST00000484305 TECRQ9NZ01 308 aaKnown RBP9.73□□□□□ -0.85
HDAC1-209ENST00000484305 MLXQ9UH92 298 aa9.73□□□□□ -0.85
HDAC1-209ENST00000484305 GPR132Q9UNW8 380 aa9.73□□□□□ -0.85
HDAC1-209ENST00000484305 C14orf166Q9Y224 244 aaKnown RBP9.73□□□□□ -0.85
HDAC1-209ENST00000484305 STAB2Q8WWQ8 2551 aa9.72□□□□□ -0.85
HDAC1-209ENST00000484305 ST8SIA3O43173 380 aa9.72□□□□□ -0.85
HDAC1-209ENST00000484305 B3GALNT1O75752 331 aa9.72□□□□□ -0.85
HDAC1-209ENST00000484305 ATG12O94817 140 aa9.72□□□□□ -0.85
HDAC1-209ENST00000484305 OR5AC1P0C628 307 aa9.72□□□□□ -0.85
HDAC1-209ENST00000484305 ADMP35318 185 aa9.72□□□□□ -0.85
HDAC1-209ENST00000484305 GUCA2BQ16661 112 aa9.72□□□□□ -0.85
HDAC1-209ENST00000484305 UBAC2Q8NBM4 344 aa9.72□□□□□ -0.85
HDAC1-209ENST00000484305 ZNF114Q8NC26 417 aa9.72□□□□□ -0.85
HDAC1-209ENST00000484305 GLYATL2Q8WU03 294 aa9.72□□□□□ -0.85
HDAC1-209ENST00000484305 MISP3Q96FF7 219 aa9.72□□□□□ -0.85
HDAC1-209ENST00000484305 BSCL2Q96G97 398 aaPredicted RBP9.72□□□□□ -0.85
HDAC1-209ENST00000484305 PRRT1Q99946 306 aa9.72□□□□□ -0.85
HDAC1-209ENST00000484305 NAA60Q9H7X0 242 aa9.72□□□□□ -0.85
HDAC1-209ENST00000484305 PLEKHA3Q9HB20 300 aa9.72□□□□□ -0.85
HDAC1-209ENST00000484305 TENM3Q9P273 2699 aa9.71□□□□□ -0.85
HDAC1-209ENST00000484305 TEX13DA0A0J9YY54 714 aaPredicted RBP9.71□□□□□ -0.86
HDAC1-209ENST00000484305 CRYM-AS1A6NIL9 109 aa9.71□□□□□ -0.86
HDAC1-209ENST00000484305 I3L2K1 104 aa9.71□□□□□ -0.86
HDAC1-209ENST00000484305 CDS2O95674 445 aa9.71□□□□□ -0.86
HDAC1-209ENST00000484305 CD7P09564 240 aa9.71□□□□□ -0.86
HDAC1-209ENST00000484305 C8orf88P0DMB2 117 aa9.71□□□□□ -0.86
HDAC1-209ENST00000484305 ETV6P41212 452 aa9.71□□□□□ -0.86
HDAC1-209ENST00000484305 CD81P60033 236 aa9.71□□□□□ -0.86
HDAC1-209ENST00000484305 ERHP84090 104 aaKnown RBP9.71□□□□□ -0.86
HDAC1-209ENST00000484305 Q56UQ5 140 aa9.71□□□□□ -0.86
HDAC1-209ENST00000484305 ZNF57Q68EA5 555 aaPredicted RBP9.71□□□□□ -0.86
HDAC1-209ENST00000484305 SPSB3Q6PJ21 355 aa9.71□□□□□ -0.86
HDAC1-209ENST00000484305 Q6ZRM9 215 aa9.71□□□□□ -0.86
HDAC1-209ENST00000484305 TMEM61Q8N0U2 210 aa9.71□□□□□ -0.86
HDAC1-209ENST00000484305 LHFPL5Q8TAF8 219 aa9.71□□□□□ -0.86
HDAC1-209ENST00000484305 RRNAD1Q96FB5 475 aaKnown RBP9.71□□□□□ -0.86
HDAC1-209ENST00000484305 RCHY1Q96PM5 261 aa9.71□□□□□ -0.86
HDAC1-209ENST00000484305 ATP6V0BQ99437 205 aa9.71□□□□□ -0.86
HDAC1-209ENST00000484305 NEURL2Q9BR09 285 aa9.71□□□□□ -0.86
HDAC1-209ENST00000484305 PALMDQ9NP74 551 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms