RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 ASB13Q8WXK3 278 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 BSCL2Q96G97 398 aaPredicted RBP3.94□□□□□ -1.78
HDAC6-223ENST00000480525 FANCD2OSQ96PS1 177 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 PHB2Q99623 299 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 PDCD10Q9BUL8 212 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 C20orf85Q9H1P6 137 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 TBC1D24Q9ULP9 559 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 OR51B2Q9Y5P1 312 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 U3KQ87 197 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 CMYA5Q8N3K9 4069 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 C13orf42A0A1B0GVH6 325 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 FAM240BA0A1B0GVZ2 78 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 E7EUB6 86 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 LINC01619G3V211 115 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 CCL24O00175 119 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 CD5P06127 495 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 PF4V1P10720 104 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 SLC25A4P12235 298 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 AKR1C4P17516 323 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 PI3P19957 117 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 TPPP2P59282 170 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 ID3Q02535 119 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 TNFRSF9Q07011 255 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 PPP1R1AQ13522 171 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 KLF5Q13887 457 aaPredicted RBP3.93□□□□□ -1.78
HDAC6-223ENST00000480525 OR2B11Q5JQS5 317 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 TMEM268Q5VZI3 342 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 ETFRF1Q6IPR1 90 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 ZNF329Q86UD4 541 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 VKORC1L1Q8N0U8 176 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 TMEM116Q8NCL8 245 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 KLHL30-AS1Q8NEE0 82 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 CACNG8Q8WXS5 425 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 MARC2Q969Z3 335 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 EEF1AKMT3Q96AZ1 226 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 RAX2Q96IS3 184 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 KLK15Q9H2R5 256 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 PLEKHA3Q9HB20 300 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 NUDT15Q9NV35 164 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 PEF1Q9UBV8 284 aaKnown RBP3.93□□□□□ -1.78
HDAC6-223ENST00000480525 DMRT1Q9Y5R6 373 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 WSB1Q9Y6I7 421 aa3.93□□□□□ -1.78
HDAC6-223ENST00000480525 TRAV30A0A087WSZ9 112 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 TRAV3A0A0B4J244 114 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 RPS10-NUDT3A0A1W2PQS6 291 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 C7orf66A4D0T2 115 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 SH2D7A6NKC9 451 aaPredicted RBP3.92□□□□□ -1.78
HDAC6-223ENST00000480525 I3L2K1 104 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 J3QRK9 145 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 K7EIM0 57 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 K7EMT4 169 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 ST8SIA3O43173 380 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 GGCTO75223 188 aaKnown RBP3.92□□□□□ -1.78
HDAC6-223ENST00000480525 TSPAN15O95858 294 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 IFNA21P01568 189 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 PF4P02776 101 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 OR13C7P0DN81 318 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 DEFA4P12838 97 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 AREGP15514 252 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 GPX4P36969 197 aaPredicted RBP3.92□□□□□ -1.78
HDAC6-223ENST00000480525 SNCAP37840 140 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 RPP30P78346 268 aaKnown RBP3.92□□□□□ -1.78
HDAC6-223ENST00000480525 RHOGP84095 191 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 CYCSP99999 105 aaKnown RBP3.92□□□□□ -1.78
HDAC6-223ENST00000480525 ATP5G2Q06055 141 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 TATDN3Q17R31 274 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 C15orf32Q32M92 178 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 ANKRD55Q3KP44 614 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 C4orf46Q504U0 113 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 RNASE12Q5GAN4 147 aaKnown RBP3.92□□□□□ -1.78
HDAC6-223ENST00000480525 C10orf55Q5SWW7 151 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 C9orf66Q5T8R8 295 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 ACSM6Q6P461 480 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 PLET1Q6UQ28 207 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 C10orf99Q6UWK7 81 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 Q6ZRM9 215 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 SSX9Q7RTT3 188 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 C1QL4Q86Z23 238 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 OR11H1Q8NG94 326 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 OR1N2Q8NGR9 330 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 ZNF502Q8TBZ5 544 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 ENKURQ8TC29 256 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 ZNF431Q8TF32 576 aaPredicted RBP3.92□□□□□ -1.78
HDAC6-223ENST00000480525 GPR146Q96CH1 333 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 OR10C1Q96KK4 312 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 RAB40CQ96S21 281 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 CLCC1Q96S66 551 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 GPHA2Q96T91 129 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 FAM110AQ9BQ89 295 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 FAM103A1Q9BTL3 118 aaKnown RBP3.92□□□□□ -1.78
HDAC6-223ENST00000480525 ZNF436Q9C0F3 470 aaPredicted RBP3.92□□□□□ -1.78
HDAC6-223ENST00000480525 HIPK2Q9H2X6 1198 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 GPN1Q9HCN4 374 aaPredicted RBP3.92□□□□□ -1.78
HDAC6-223ENST00000480525 PEMTQ9UBM1 199 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 CACNG5Q9UF02 275 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 DNAH3Q8TD57 4116 aa3.92□□□□□ -1.78
HDAC6-223ENST00000480525 A0A0G2JRQ6 117 aa3.91□□□□□ -1.78
HDAC6-223ENST00000480525 C15orf62A8K5M9 175 aa3.91□□□□□ -1.78
HDAC6-223ENST00000480525 NUDT19A8MXV4 375 aa3.91□□□□□ -1.78
HDAC6-223ENST00000480525 NDUFA4O00483 81 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms