RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 TMEM14BQ9NUH8 114 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 TMEM106BQ9NUM4 274 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 BET1LQ9NYM9 111 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 METTL1Q9UBP6 276 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 ZNF835Q9Y2P0 537 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 PXMP4Q9Y6I8 212 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 FRYQ5TBA9 3013 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 ARID1AO14497 2285 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 HELZ2Q9BYK8 2649 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 OTOGLQ3ZCN5 2332 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 PMS2P5A8MQ11 134 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 B9A039 149 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 C11orf94C9JXX5 98 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 TMEM178BH3BS89 294 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 J3QR06 171 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 K7ENP7 123 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 UPK2O00526 184 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 PAGE4O60829 102 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 CLN5O75503 358 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 CGB3P0DN86 165 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 CGB7P0DN87 165 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 USF1P22415 310 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 MC5RP33032 325 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 VDAC2P45880 294 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 MEOX2P50222 304 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 PRRX1P54821 245 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 B2MP61769 119 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 SNRPEP62304 92 aaKnown RBP4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 PRCDQ00LT1 54 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 HABP2Q14520 560 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 ZNF726P1Q15940 193 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 SSX2Q16385 188 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 FAM201AQ5SY85 155 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 FAM90A2PQ658T7 463 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 HEPN1Q6WQI6 88 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 PDPNQ86YL7 162 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 RPP25LQ8N5L8 163 aaKnown RBP4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 ZNF439Q8NDP4 499 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 DDB2Q92466 427 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 CCL17Q92583 94 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 FLYWCH2Q96CP2 140 aaKnown RBP4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 FAM210BQ96KR6 192 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 HARBI1Q96MB7 349 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 NEU1Q99519 415 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 C12orf57Q99622 126 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 PCGF1Q9BSM1 259 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 VSIRQ9H7M9 311 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 SDF2L1Q9HCN8 221 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 TMEM167BQ9NRX6 74 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 JKAMPQ9P055 326 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 SLC45A2Q9UMX9 530 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 AMMECR1Q9Y4X0 333 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 RFNGQ9Y644 331 aa4.8□□□□□ -1.64
ATPAF1-204ENST00000474020 NBEAQ8NFP9 2946 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 PTPRBP23467 1997 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 IGHV1-69-2A0A0G2JMI3 117 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 MDFIC2A0A1B0GVS7 189 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 A0A1W2PPE3 182 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 DPRXA6NFQ7 191 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 ZNF98A6NK75 572 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 PPP5D1E7EU14 171 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 K7EM74 188 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 UBE2CO00762 179 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 SLC31A2O15432 143 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 ACTL6BO94805 426 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 NUDT3O95989 172 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 CA2P00918 260 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 IGHV3-7P01780 117 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 IL6RP08887 468 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 FBP1P09467 338 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 CD99P14209 185 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 MDKP21741 143 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 CCKARP32238 428 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 SRP14P37108 136 aaKnown RBP4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 RPL29P47914 159 aaKnown RBP4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 ZNF134P52741 427 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 BRWD1-AS2P59051 145 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 BPIFB3P59826 476 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 RPS16P62249 146 aaKnown RBP4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 FABP9Q0Z7S8 132 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 EFNB3Q15768 340 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 NCMAPQ5T1S8 102 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 WDR25Q64LD2 544 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 SP5Q6BEB4 398 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 ETFRF1Q6IPR1 90 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 ZNF833PQ6ZTB9 187 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 TGIF2LYQ8IUE0 185 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 VKORC1L1Q8N0U8 176 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 LINC00311Q8N616 119 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 ZNF383Q8NA42 475 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 OR4C13Q8NGP0 309 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 OR1L8Q8NGR8 309 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 OR9G1Q8NH87 305 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 TNFRSF14Q92956 283 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 RNASE6Q93091 150 aaKnown RBP4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 LEAP2Q969E1 77 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 SNRNP40Q96DI7 357 aaKnown RBP4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 TIMD4Q96H15 378 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 PARLQ9H300 379 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 TECRQ9NZ01 308 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms