RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 AQP12BA6NM10 295 aa4.21□□□□□ -1.74
HDAC3-206ENST00000471968 RAB27BO00194 218 aa4.21□□□□□ -1.74
HDAC3-206ENST00000471968 ITGB1BP1O14713 200 aa4.21□□□□□ -1.74
HDAC3-206ENST00000471968 NOL3O60936 208 aaKnown RBP4.21□□□□□ -1.74
HDAC3-206ENST00000471968 CA11O75493 328 aa4.21□□□□□ -1.74
HDAC3-206ENST00000471968 GASTP01350 101 aa4.21□□□□□ -1.74
HDAC3-206ENST00000471968 CTSGP08311 255 aa4.21□□□□□ -1.74
HDAC3-206ENST00000471968 SLC2A5P22732 501 aa4.21□□□□□ -1.74
HDAC3-206ENST00000471968 DCKP27707 260 aa4.21□□□□□ -1.74
HDAC3-206ENST00000471968 DEFB1P60022 68 aa4.21□□□□□ -1.74
HDAC3-206ENST00000471968 HMGN3Q15651 99 aa4.21□□□□□ -1.74
HDAC3-206ENST00000471968 GDF5OSQ5U4N7 250 aa4.21□□□□□ -1.74
HDAC3-206ENST00000471968 AQP12AQ8IXF9 295 aa4.21□□□□□ -1.74
HDAC3-206ENST00000471968 C10orf126Q8N4M7 172 aa4.21□□□□□ -1.74
HDAC3-206ENST00000471968 OR13C3Q8NGS6 347 aa4.21□□□□□ -1.74
HDAC3-206ENST00000471968 OR10J6PQ8NGY7 276 aa4.21□□□□□ -1.74
HDAC3-206ENST00000471968 VSIG2Q96IQ7 327 aa4.21□□□□□ -1.74
HDAC3-206ENST00000471968 CNBD2Q96M20 576 aa4.21□□□□□ -1.74
HDAC3-206ENST00000471968 GINS3Q9BRX5 216 aa4.21□□□□□ -1.74
HDAC3-206ENST00000471968 ISG20L2Q9H9L3 353 aaKnown RBP4.21□□□□□ -1.74
HDAC3-206ENST00000471968 SPACA1Q9HBV2 294 aa4.21□□□□□ -1.74
HDAC3-206ENST00000471968 C8orf4Q9NR00 106 aa4.21□□□□□ -1.74
HDAC3-206ENST00000471968 H2AFY2Q9P0M6 372 aaPredicted RBP4.21□□□□□ -1.74
HDAC3-206ENST00000471968 OR1A1Q9P1Q5 309 aa4.21□□□□□ -1.74
HDAC3-206ENST00000471968 EXOGQ9Y2C4 368 aaKnown RBP4.21□□□□□ -1.74
HDAC3-206ENST00000471968 RCL1Q9Y2P8 373 aaKnown RBP4.21□□□□□ -1.74
HDAC3-206ENST00000471968 ORC6Q9Y5N6 252 aa4.21□□□□□ -1.74
HDAC3-206ENST00000471968 PEX16Q9Y5Y5 336 aa4.21□□□□□ -1.74
HDAC3-206ENST00000471968 A0A1W2PQL4 384 aaPredicted RBP4.2□□□□□ -1.74
HDAC3-206ENST00000471968 SC5DO75845 299 aa4.2□□□□□ -1.74
HDAC3-206ENST00000471968 HMGN1P05114 100 aa4.2□□□□□ -1.74
HDAC3-206ENST00000471968 KRT8P05787 483 aa4.2□□□□□ -1.74
HDAC3-206ENST00000471968 FCGR1AP12314 374 aa4.2□□□□□ -1.74
HDAC3-206ENST00000471968 ANXA8P13928 327 aa4.2□□□□□ -1.74
HDAC3-206ENST00000471968 AZU1P20160 251 aa4.2□□□□□ -1.74
HDAC3-206ENST00000471968 CEACAM6P40199 344 aa4.2□□□□□ -1.74
HDAC3-206ENST00000471968 PPP1R8Q12972 351 aaKnown RBP4.2□□□□□ -1.74
HDAC3-206ENST00000471968 TRIM16LQ309B1 348 aa4.2□□□□□ -1.74
HDAC3-206ENST00000471968 TDRG1Q3Y452 100 aa4.2□□□□□ -1.74
HDAC3-206ENST00000471968 SMUG1Q53HV7 270 aa4.2□□□□□ -1.74
HDAC3-206ENST00000471968 FFAR4Q5NUL3 377 aa4.2□□□□□ -1.74
HDAC3-206ENST00000471968 REG3GQ6UW15 175 aa4.2□□□□□ -1.74
HDAC3-206ENST00000471968 CD300LDQ6UXZ3 194 aa4.2□□□□□ -1.74
HDAC3-206ENST00000471968 SSX6Q7RTT6 188 aa4.2□□□□□ -1.74
HDAC3-206ENST00000471968 VKORC1L1Q8N0U8 176 aa4.2□□□□□ -1.74
HDAC3-206ENST00000471968 OR51A4Q8NGJ6 313 aa4.2□□□□□ -1.74
HDAC3-206ENST00000471968 OR6M1Q8NGM8 313 aa4.2□□□□□ -1.74
HDAC3-206ENST00000471968 WDR12Q9GZL7 423 aaKnown RBP4.2□□□□□ -1.74
HDAC3-206ENST00000471968 METTL9Q9H1A3 318 aa4.2□□□□□ -1.74
HDAC3-206ENST00000471968 TMEM231Q9H6L2 316 aa4.2□□□□□ -1.74
HDAC3-206ENST00000471968 GHRLQ9UBU3 117 aa4.2□□□□□ -1.74
HDAC3-206ENST00000471968 RPH3ALQ9UNE2 315 aa4.2□□□□□ -1.74
HDAC3-206ENST00000471968 ZNF670-ZNF695F2Z2N8 137 aa4.19□□□□□ -1.74
HDAC3-206ENST00000471968 OGG1O15527 345 aa4.19□□□□□ -1.74
HDAC3-206ENST00000471968 RRASP10301 218 aa4.19□□□□□ -1.74
HDAC3-206ENST00000471968 MGMTP16455 207 aa4.19□□□□□ -1.74
HDAC3-206ENST00000471968 ATP6V1E1P36543 226 aa4.19□□□□□ -1.74
HDAC3-206ENST00000471968 SNRPD3P62318 126 aaKnown RBP4.19□□□□□ -1.74
HDAC3-206ENST00000471968 UNC119Q13432 240 aa4.19□□□□□ -1.74
HDAC3-206ENST00000471968 TMEM244Q5VVB8 128 aa4.19□□□□□ -1.74
HDAC3-206ENST00000471968 LYPD5Q6UWN5 251 aa4.19□□□□□ -1.74
HDAC3-206ENST00000471968 FAM220AQ7Z4H9 259 aa4.19□□□□□ -1.74
HDAC3-206ENST00000471968 SLC35F2Q8IXU6 374 aa4.19□□□□□ -1.74
HDAC3-206ENST00000471968 PACRGLQ8N7B6 248 aa4.19□□□□□ -1.74
HDAC3-206ENST00000471968 OSR1Q8TAX0 266 aaPredicted RBP4.19□□□□□ -1.74
HDAC3-206ENST00000471968 TMEM167AQ8TBQ9 72 aa4.19□□□□□ -1.74
HDAC3-206ENST00000471968 CANT1Q8WVQ1 401 aa4.19□□□□□ -1.74
HDAC3-206ENST00000471968 CPNE2Q96FN4 548 aaPredicted RBP4.19□□□□□ -1.74
HDAC3-206ENST00000471968 IL4I1Q96RQ9 567 aa4.19□□□□□ -1.74
HDAC3-206ENST00000471968 FEVQ99581 238 aa4.19□□□□□ -1.74
HDAC3-206ENST00000471968 DCUN1D5Q9BTE7 237 aa4.19□□□□□ -1.74
HDAC3-206ENST00000471968 OR51E2Q9H255 320 aa4.19□□□□□ -1.74
HDAC3-206ENST00000471968 NOP10Q9NPE3 64 aaKnown RBP4.19□□□□□ -1.74
HDAC3-206ENST00000471968 PRELID1Q9Y255 219 aa4.19□□□□□ -1.74
HDAC3-206ENST00000471968 TCRBV5S2A0A599 114 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 CCDC182A6NF36 153 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 CGB1A6NKQ9 187 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 G3V2T6 193 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 H3BMQ9 156 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 OSMP13725 252 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 GTF2F2P13984 249 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 ZBTB25P24278 435 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 CRHBPP24387 322 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 TSPOP30536 169 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 P2RY1P47900 373 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 HMGA2P52926 109 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 TMBIM6P55061 237 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 SNRPGP62308 76 aaKnown RBP4.18□□□□□ -1.74
HDAC3-206ENST00000471968 MRPS15P82914 257 aaKnown RBP4.18□□□□□ -1.74
HDAC3-206ENST00000471968 MS4A2Q01362 244 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 TPBGQ13641 420 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 GINS1Q14691 196 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 ZNF846Q147U1 533 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 SLC25A24Q6NUK1 477 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 TOMM20LQ6UXN7 152 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 CLVS1Q8IUQ0 354 aaPredicted RBP4.18□□□□□ -1.74
HDAC3-206ENST00000471968 ADGRG5Q8IZF4 528 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.18□□□□□ -1.74
HDAC3-206ENST00000471968 RAB2BQ8WUD1 216 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 CHAC2Q8WUX2 184 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms