RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 EWSR1Q01844 656 aaKnown RBP eCLIP9.86□□□□□ -0.83
CPSF4-210ENST00000469897 CADM3Q8N126 398 aa9.86□□□□□ -0.83
CPSF4-210ENST00000469897 TMEM56Q96MV1 263 aa9.86□□□□□ -0.83
CPSF4-210ENST00000469897 FXYD6Q9H0Q3 95 aa9.86□□□□□ -0.83
CPSF4-210ENST00000469897 FKBP11Q9NYL4 201 aa9.86□□□□□ -0.83
CPSF4-210ENST00000469897 COMMD3Q9UBI1 195 aa9.86□□□□□ -0.83
CPSF4-210ENST00000469897 PRNDQ9UKY0 176 aa9.86□□□□□ -0.83
CPSF4-210ENST00000469897 EIF4EP06730 217 aaKnown RBP9.85□□□□□ -0.83
CPSF4-210ENST00000469897 CTSDP07339 412 aaPredicted RBP9.85□□□□□ -0.83
CPSF4-210ENST00000469897 RPL35AP18077 110 aaKnown RBP9.85□□□□□ -0.83
CPSF4-210ENST00000469897 APOC4P55056 127 aa9.85□□□□□ -0.83
CPSF4-210ENST00000469897 PMS2P11Q13670 270 aa9.85□□□□□ -0.83
CPSF4-210ENST00000469897 LPCAT3Q6P1A2 487 aa9.85□□□□□ -0.83
CPSF4-210ENST00000469897 Q6ZWC4 215 aa9.85□□□□□ -0.83
CPSF4-210ENST00000469897 TBC1D26Q86UD7 250 aa9.85□□□□□ -0.83
CPSF4-210ENST00000469897 OR5B3Q8NH48 314 aa9.85□□□□□ -0.83
CPSF4-210ENST00000469897 SLC25A46Q96AG3 418 aa9.85□□□□□ -0.83
CPSF4-210ENST00000469897 SMPXQ9UHP9 88 aa9.85□□□□□ -0.83
CPSF4-210ENST00000469897 HYDINQ4G0P3 5121 aa9.85□□□□□ -0.83
CPSF4-210ENST00000469897 IGHV3-49A0A0A0MS15 119 aa9.84□□□□□ -0.83
CPSF4-210ENST00000469897 SMIM31A0A1B0GVY4 71 aa9.84□□□□□ -0.83
CPSF4-210ENST00000469897 CXorf65A6NEN9 183 aa9.84□□□□□ -0.83
CPSF4-210ENST00000469897 YIF1AO95070 293 aa9.84□□□□□ -0.83
CPSF4-210ENST00000469897 IGHV3-48P01763 117 aa9.84□□□□□ -0.83
CPSF4-210ENST00000469897 BMI1P35226 326 aa9.84□□□□□ -0.83
CPSF4-210ENST00000469897 DEFB135Q30KP9 77 aa9.84□□□□□ -0.83
CPSF4-210ENST00000469897 ODF3L2Q3SX64 289 aa9.84□□□□□ -0.83
CPSF4-210ENST00000469897 LYG2Q86SG7 212 aa9.84□□□□□ -0.83
CPSF4-210ENST00000469897 WFDC3Q8IUB2 231 aa9.84□□□□□ -0.83
CPSF4-210ENST00000469897 SNX29P2Q8IUI4 249 aa9.84□□□□□ -0.83
CPSF4-210ENST00000469897 STPG3Q8N7X2 389 aa9.84□□□□□ -0.83
CPSF4-210ENST00000469897 OR1P1Q8NH06 330 aa9.84□□□□□ -0.83
CPSF4-210ENST00000469897 GPX8Q8TED1 209 aa9.84□□□□□ -0.83
CPSF4-210ENST00000469897 MISP3Q96FF7 219 aa9.84□□□□□ -0.83
CPSF4-210ENST00000469897 ZNF414Q96IQ9 312 aa9.84□□□□□ -0.83
CPSF4-210ENST00000469897 ATP6V0BQ99437 205 aa9.84□□□□□ -0.83
CPSF4-210ENST00000469897 RNF2Q99496 336 aa9.84□□□□□ -0.83
CPSF4-210ENST00000469897 TSC22D3Q99576 134 aa9.84□□□□□ -0.83
CPSF4-210ENST00000469897 TMEM14BQ9NUH8 114 aa9.84□□□□□ -0.83
CPSF4-210ENST00000469897 IGKV3-7A0A075B6H7 116 aa9.83□□□□□ -0.84
CPSF4-210ENST00000469897 A0A087WXM4 84 aa9.83□□□□□ -0.84
CPSF4-210ENST00000469897 OR4C46A6NHA9 309 aa9.83□□□□□ -0.84
CPSF4-210ENST00000469897 C15orf61A6NNL5 157 aa9.83□□□□□ -0.84
CPSF4-210ENST00000469897 C15orf62A8K5M9 175 aa9.83□□□□□ -0.84
CPSF4-210ENST00000469897 UBE2CO00762 179 aa9.83□□□□□ -0.84
CPSF4-210ENST00000469897 LY6G6CO95867 125 aa9.83□□□□□ -0.84
CPSF4-210ENST00000469897 IGKV1-39P01597 117 aa9.83□□□□□ -0.84
CPSF4-210ENST00000469897 IGKV1D-39P04432 117 aa9.83□□□□□ -0.84
CPSF4-210ENST00000469897 TFPI2P48307 235 aa9.83□□□□□ -0.84
CPSF4-210ENST00000469897 H2BFWTQ7Z2G1 175 aa9.83□□□□□ -0.84
CPSF4-210ENST00000469897 APRG1Q8IVJ8 170 aa9.83□□□□□ -0.84
CPSF4-210ENST00000469897 OR4A16Q8NH70 328 aa9.83□□□□□ -0.84
CPSF4-210ENST00000469897 RNF183Q96D59 192 aa9.83□□□□□ -0.84
CPSF4-210ENST00000469897 SEC22AQ96IW7 307 aa9.83□□□□□ -0.84
CPSF4-210ENST00000469897 RHPN1-AS1Q9BWJ2 59 aa9.83□□□□□ -0.84
CPSF4-210ENST00000469897 TP53TG1Q9Y2A0 90 aa9.83□□□□□ -0.84
CPSF4-210ENST00000469897 KIR2DL5BA0A0G2JN68 375 aa9.82□□□□□ -0.84
CPSF4-210ENST00000469897 KIR2DL5BA0A0G2JPC4 375 aa9.82□□□□□ -0.84
CPSF4-210ENST00000469897 IGHV7-4-1A0A0J9YVY3 117 aa9.82□□□□□ -0.84
CPSF4-210ENST00000469897 I3L2K1 104 aa9.82□□□□□ -0.84
CPSF4-210ENST00000469897 CHEK1O14757 476 aa9.82□□□□□ -0.84
CPSF4-210ENST00000469897 NUPL2O15504 423 aaKnown RBP9.82□□□□□ -0.84
CPSF4-210ENST00000469897 MT-CO2P00403 227 aa9.82□□□□□ -0.84
CPSF4-210ENST00000469897 S100GP29377 79 aa9.82□□□□□ -0.84
CPSF4-210ENST00000469897 MFAP4P55083 255 aa9.82□□□□□ -0.84
CPSF4-210ENST00000469897 NCS1P62166 190 aa9.82□□□□□ -0.84
CPSF4-210ENST00000469897 TNFRSF9Q07011 255 aa9.82□□□□□ -0.84
CPSF4-210ENST00000469897 ZNF124Q15973 351 aa9.82□□□□□ -0.84
CPSF4-210ENST00000469897 IZUMO4Q1ZYL8 232 aa9.82□□□□□ -0.84
CPSF4-210ENST00000469897 KIR2DL5AQ8N109 375 aa9.82□□□□□ -0.84
CPSF4-210ENST00000469897 TMEM116Q8NCL8 245 aa9.82□□□□□ -0.84
CPSF4-210ENST00000469897 KIR2DL5BQ8NHK3 375 aa9.82□□□□□ -0.84
CPSF4-210ENST00000469897 MAP6D1Q9H9H5 199 aa9.82□□□□□ -0.84
CPSF4-210ENST00000469897 BIRC6Q9NR09 4857 aa9.82□□□□□ -0.84
CPSF4-210ENST00000469897 IGHV3OR16-13A0A075B7E8 117 aa9.81□□□□□ -0.84
CPSF4-210ENST00000469897 TRAV14DV4A0A0A6YYC5 116 aa9.81□□□□□ -0.84
CPSF4-210ENST00000469897 IGHV3-74A0A0B4J1X5 117 aa9.81□□□□□ -0.84
CPSF4-210ENST00000469897 M0QYG6 137 aa9.81□□□□□ -0.84
CPSF4-210ENST00000469897 HPGDSO60760 199 aa9.81□□□□□ -0.84
CPSF4-210ENST00000469897 ELK1P19419 428 aa9.81□□□□□ -0.84
CPSF4-210ENST00000469897 UCP3P55916 312 aa9.81□□□□□ -0.84
CPSF4-210ENST00000469897 HSPE1P61604 102 aaKnown RBP9.81□□□□□ -0.84
CPSF4-210ENST00000469897 VBP1P61758 197 aa9.81□□□□□ -0.84
CPSF4-210ENST00000469897 RELQ04864 619 aaPredicted RBP9.81□□□□□ -0.84
CPSF4-210ENST00000469897 SPINK9Q5DT21 86 aa9.81□□□□□ -0.84
CPSF4-210ENST00000469897 CEMP1Q6PRD7 247 aaPredicted RBP9.81□□□□□ -0.84
CPSF4-210ENST00000469897 GBGT1Q8N5D6 347 aa9.81□□□□□ -0.84
CPSF4-210ENST00000469897 LINC00476Q8WZB0 136 aa9.81□□□□□ -0.84
CPSF4-210ENST00000469897 MRGPRFQ96AM1 343 aa9.81□□□□□ -0.84
CPSF4-210ENST00000469897 PINX1Q96BK5 328 aaKnown RBP9.81□□□□□ -0.84
CPSF4-210ENST00000469897 GALNT14Q96FL9 552 aa9.81□□□□□ -0.84
CPSF4-210ENST00000469897 TXN2Q99757 166 aa9.81□□□□□ -0.84
CPSF4-210ENST00000469897 FUNDC2Q9BWH2 189 aa9.81□□□□□ -0.84
CPSF4-210ENST00000469897 SCPEP1Q9HB40 452 aa9.81□□□□□ -0.84
CPSF4-210ENST00000469897 VCX3AQ9NNX9 186 aa9.81□□□□□ -0.84
CPSF4-210ENST00000469897 FAM212BQ9NTI7 297 aaPredicted RBP9.81□□□□□ -0.84
CPSF4-210ENST00000469897 APOA1P02647 267 aa9.8□□□□□ -0.84
CPSF4-210ENST00000469897 FCGR2BP31994 310 aaPredicted RBP9.8□□□□□ -0.84
CPSF4-210ENST00000469897 RCVRNP35243 200 aa9.8□□□□□ -0.84
CPSF4-210ENST00000469897 ERHP84090 104 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms