RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 PRCDQ00LT1 54 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 ARL16Q0P5N6 197 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 SCGB2A2Q13296 93 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 KIAA0141Q14154 515 aaPredicted RBP4.67□□□□□ -1.66
USP39-213ENST00000467885 PLGLAQ15195 96 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 CTRB2Q6GPI1 263 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 THOC7Q6I9Y2 204 aaKnown RBP4.67□□□□□ -1.66
USP39-213ENST00000467885 PRSS54Q6PEW0 395 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 Q6ZSV7 163 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 OR2C3Q8N628 320 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 OR5T1Q8NG75 326 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 OR2T35Q8NGX2 323 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 SGMS2Q8NHU3 365 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 SRSF12Q8WXF0 261 aaKnown RBP4.67□□□□□ -1.66
USP39-213ENST00000467885 TMEM68Q96MH6 324 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 FANCD2OSQ96PS1 177 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 RAB40CQ96S21 281 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 P2RX4Q99571 388 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 SRSF8Q9BRL6 282 aaKnown RBP4.67□□□□□ -1.66
USP39-213ENST00000467885 FAM103A1Q9BTL3 118 aaKnown RBP4.67□□□□□ -1.66
USP39-213ENST00000467885 PDCD10Q9BUL8 212 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 PRSS22Q9GZN4 317 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 WNT10AQ9GZT5 417 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 C16orf95Q9H693 158 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 ZNF702PQ9H963 129 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 LINC00527Q9UJ94 153 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 RCL1Q9Y2P8 373 aaKnown RBP4.67□□□□□ -1.66
USP39-213ENST00000467885 RNF114Q9Y508 228 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 WSB1Q9Y6I7 421 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 U3KQ87 197 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 SONP18583 2426 aaKnown RBP4.67□□□□□ -1.66
USP39-213ENST00000467885 FN1P02751 2386 aaKnown RBP4.67□□□□□ -1.66
USP39-213ENST00000467885 BTBD17A6NE02 478 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 C15orf62A8K5M9 175 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 HMSDA8MTL9 139 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 CEBPZOSA8MTT3 80 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 F8W735 103 aaPredicted RBP4.66□□□□□ -1.66
USP39-213ENST00000467885 TRIM77I1YAP6 450 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 ATP6V0E1O15342 81 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 SOX15O60248 233 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 PFDN1O60925 122 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 RBMXL2O75526 392 aaKnown RBP4.66□□□□□ -1.66
USP39-213ENST00000467885 MED6O75586 246 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 ACTL6BO94805 426 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 BRI3O95415 125 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 IGLV1-40P01703 118 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 C1QBP02746 253 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 APELAP0DMC3 54 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 HKR1P10072 659 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 RNASE2P10153 161 aaKnown RBP4.66□□□□□ -1.66
USP39-213ENST00000467885 IAPPP10997 89 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 P2RY1P47900 373 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 ATP5IP56385 69 aaPredicted RBP4.66□□□□□ -1.66
USP39-213ENST00000467885 ERHP84090 104 aaKnown RBP4.66□□□□□ -1.66
USP39-213ENST00000467885 SRSF2Q01130 221 aaKnown RBP4.66□□□□□ -1.66
USP39-213ENST00000467885 NHLH2Q02577 135 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 CFHR3Q02985 330 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 FGL1Q08830 312 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 TMEM267Q0VDI3 215 aaPredicted RBP4.66□□□□□ -1.66
USP39-213ENST00000467885 LGALSLQ3ZCW2 172 aaPredicted RBP4.66□□□□□ -1.66
USP39-213ENST00000467885 LRRC37A5PQ49AS3 106 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 LAMTOR1Q6IAA8 161 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 TMEM14EPQ6UXP3 125 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 C19orf35Q6ZS72 473 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 ZNF546Q86UE3 836 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 AKAP14Q86UN6 197 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 HAPLN4Q86UW8 402 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 TMEM252Q8N6L7 170 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 SVIPQ8NHG7 77 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 DTD1Q8TEA8 209 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 WIPF2Q8TF74 440 aaPredicted RBP4.66□□□□□ -1.66
USP39-213ENST00000467885 ARPC1AQ92747 370 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 BSCL2Q96G97 398 aaPredicted RBP4.66□□□□□ -1.66
USP39-213ENST00000467885 NOL4LQ96MY1 436 aaPredicted RBP4.66□□□□□ -1.66
USP39-213ENST00000467885 OR4C12Q96R67 309 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 HINT2Q9BX68 163 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 MRPL18Q9H0U6 180 aaKnown RBP4.66□□□□□ -1.66
USP39-213ENST00000467885 HIPK2Q9H2X6 1198 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 HEYLQ9NQ87 328 aaPredicted RBP4.66□□□□□ -1.66
USP39-213ENST00000467885 ZFP57Q9NU63 452 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 PSENENQ9NZ42 101 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 LSM5Q9Y4Y9 91 aaKnown RBP4.66□□□□□ -1.66
USP39-213ENST00000467885 NF1P21359 2839 aa4.66□□□□□ -1.66
USP39-213ENST00000467885 TRBV9A0A0B4J1U6 114 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 TRAV41A0A0B4J266 112 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 A0A1W2PN81 502 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 NPIPB5A8MRT5 1133 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 PRSS46E5RG02 174 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 E5RGE8 158 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 AP4M1O00189 453 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 TCF21O43680 179 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 TSC22D2O75157 780 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 LY86O95711 162 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 PRH1P02810 166 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 REG1AP05451 166 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 CXCL2P19875 107 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 RPL12P30050 165 aaKnown RBP4.65□□□□□ -1.67
USP39-213ENST00000467885 CHRNA7P36544 502 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 HTR2BP41595 481 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 RPL15P61313 204 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms