RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 AGMATQ9BSE5 352 aa11.04□□□□□ -0.64
HMGXB4-206ENST00000466438 ZNF436Q9C0F3 470 aaPredicted RBP11.04□□□□□ -0.64
HMGXB4-206ENST00000466438 TMEM222Q9H0R3 208 aa11.04□□□□□ -0.64
HMGXB4-206ENST00000466438 IFI27L2Q9H2X8 130 aa11.04□□□□□ -0.64
HMGXB4-206ENST00000466438 DUXBA0A1W2PPF3 345 aa11.03□□□□□ -0.64
HMGXB4-206ENST00000466438 TNFSF12O43508 249 aa11.03□□□□□ -0.64
HMGXB4-206ENST00000466438 IFNA21P01568 189 aa11.03□□□□□ -0.64
HMGXB4-206ENST00000466438 SERPINE2P07093 398 aa11.03□□□□□ -0.64
HMGXB4-206ENST00000466438 HNRNPCP07910 306 aaKnown RBP eCLIP11.03□□□□□ -0.64
HMGXB4-206ENST00000466438 GIPP09681 153 aaPredicted RBP11.03□□□□□ -0.64
HMGXB4-206ENST00000466438 TMEM267Q0VDI3 215 aaPredicted RBP11.03□□□□□ -0.64
HMGXB4-206ENST00000466438 TMEM187Q14656 261 aa11.03□□□□□ -0.64
HMGXB4-206ENST00000466438 FAM71F2Q6NXP2 309 aa11.03□□□□□ -0.64
HMGXB4-206ENST00000466438 TCTE3Q8IZS6 198 aa11.03□□□□□ -0.64
HMGXB4-206ENST00000466438 LRTM2Q8N967 370 aa11.03□□□□□ -0.64
HMGXB4-206ENST00000466438 OR51H1Q8NH63 302 aa11.03□□□□□ -0.64
HMGXB4-206ENST00000466438 IL22RA2Q969J5 263 aa11.03□□□□□ -0.64
HMGXB4-206ENST00000466438 ABHD14BQ96IU4 210 aa11.03□□□□□ -0.64
HMGXB4-206ENST00000466438 ADTRPQ96IZ2 230 aa11.03□□□□□ -0.64
HMGXB4-206ENST00000466438 PDCD10Q9BUL8 212 aa11.03□□□□□ -0.64
HMGXB4-206ENST00000466438 GGTLC1Q9BX51 225 aa11.03□□□□□ -0.64
HMGXB4-206ENST00000466438 FAM212BQ9NTI7 297 aaPredicted RBP11.03□□□□□ -0.64
HMGXB4-206ENST00000466438 SDHAF2Q9NX18 166 aa11.03□□□□□ -0.64
HMGXB4-206ENST00000466438 RNF150Q9ULK6 438 aa11.03□□□□□ -0.64
HMGXB4-206ENST00000466438 PKD1P98161 4303 aa11.03□□□□□ -0.64
HMGXB4-206ENST00000466438 DBX1A6NMT0 343 aa11.02□□□□□ -0.65
HMGXB4-206ENST00000466438 ZNF785A8K8V0 405 aa11.02□□□□□ -0.65
HMGXB4-206ENST00000466438 ATG12O94817 140 aa11.02□□□□□ -0.65
HMGXB4-206ENST00000466438 IGLV2-14P01704 120 aa11.02□□□□□ -0.65
HMGXB4-206ENST00000466438 RPA2P15927 270 aa11.02□□□□□ -0.65
HMGXB4-206ENST00000466438 HLA-GP17693 338 aa11.02□□□□□ -0.65
HMGXB4-206ENST00000466438 UCP1P25874 307 aa11.02□□□□□ -0.65
HMGXB4-206ENST00000466438 BMI1P35226 326 aa11.02□□□□□ -0.65
HMGXB4-206ENST00000466438 KIR2DS2P43631 304 aa11.02□□□□□ -0.65
HMGXB4-206ENST00000466438 RAP2BP61225 183 aa11.02□□□□□ -0.65
HMGXB4-206ENST00000466438 ANKRD55Q3KP44 614 aa11.02□□□□□ -0.65
HMGXB4-206ENST00000466438 CT45A1Q5HYN5 189 aa11.02□□□□□ -0.65
HMGXB4-206ENST00000466438 GSG1LQ6UXU4 331 aa11.02□□□□□ -0.65
HMGXB4-206ENST00000466438 TMEM217Q8N7C4 229 aa11.02□□□□□ -0.65
HMGXB4-206ENST00000466438 CT45A3Q8NHU0 189 aa11.02□□□□□ -0.65
HMGXB4-206ENST00000466438 CD300LFQ8TDQ1 290 aa11.02□□□□□ -0.65
HMGXB4-206ENST00000466438 TCTEX1D2Q8WW35 142 aa11.02□□□□□ -0.65
HMGXB4-206ENST00000466438 ST6GAL2Q96JF0 529 aa11.02□□□□□ -0.65
HMGXB4-206ENST00000466438 RITA1Q96K30 269 aa11.02□□□□□ -0.65
HMGXB4-206ENST00000466438 TP53RKQ96S44 253 aa11.02□□□□□ -0.65
HMGXB4-206ENST00000466438 TP53TG1Q9Y2A0 90 aa11.02□□□□□ -0.65
HMGXB4-206ENST00000466438 PRELID3BQ9Y3B1 194 aa11.02□□□□□ -0.65
HMGXB4-206ENST00000466438 SAA2-SAA4A0A096LPE2 208 aa11.01□□□□□ -0.65
HMGXB4-206ENST00000466438 MSGN1A6NI15 193 aa11.01□□□□□ -0.65
HMGXB4-206ENST00000466438 PRSS29PA6NIE9 313 aa11.01□□□□□ -0.65
HMGXB4-206ENST00000466438 M0R1X1 148 aa11.01□□□□□ -0.65
HMGXB4-206ENST00000466438 SLC31A2O15432 143 aa11.01□□□□□ -0.65
HMGXB4-206ENST00000466438 NDUFA3O95167 84 aa11.01□□□□□ -0.65
HMGXB4-206ENST00000466438 TRGV3P03979 118 aa11.01□□□□□ -0.65
HMGXB4-206ENST00000466438 SAA2P0DJI9 122 aaPredicted RBP11.01□□□□□ -0.65
HMGXB4-206ENST00000466438 EGR2P11161 476 aaPredicted RBP11.01□□□□□ -0.65
HMGXB4-206ENST00000466438 CXCL3P19876 107 aa11.01□□□□□ -0.65
HMGXB4-206ENST00000466438 CYCSP99999 105 aaKnown RBP11.01□□□□□ -0.65
HMGXB4-206ENST00000466438 SP6Q3SY56 376 aa11.01□□□□□ -0.65
HMGXB4-206ENST00000466438 CD300EQ496F6 205 aaPredicted RBP11.01□□□□□ -0.65
HMGXB4-206ENST00000466438 NPBQ8NG41 125 aa11.01□□□□□ -0.65
HMGXB4-206ENST00000466438 GLYATL2Q8WU03 294 aa11.01□□□□□ -0.65
HMGXB4-206ENST00000466438 RBPMSQ93062 196 aaKnown RBP11.01□□□□□ -0.65
HMGXB4-206ENST00000466438 TMED3Q9Y3Q3 217 aa11.01□□□□□ -0.65
HMGXB4-206ENST00000466438 LOC102724200A0A096LPH7 203 aaPredicted RBP11□□□□□ -0.65
HMGXB4-206ENST00000466438 C13orf42A0A1B0GVH6 325 aa11□□□□□ -0.65
HMGXB4-206ENST00000466438 ANKRD34BA5PLL1 514 aa11□□□□□ -0.65
HMGXB4-206ENST00000466438 C5orf51A6NDU8 294 aa11□□□□□ -0.65
HMGXB4-206ENST00000466438 FAM25EA8MYX2 175 aa11□□□□□ -0.65
HMGXB4-206ENST00000466438 OR2A4O95047 310 aa11□□□□□ -0.65
HMGXB4-206ENST00000466438 ZNF134P52741 427 aa11□□□□□ -0.65
HMGXB4-206ENST00000466438 CX3CL1P78423 397 aa11□□□□□ -0.65
HMGXB4-206ENST00000466438 EIF4EBP1Q13541 118 aaPredicted RBP11□□□□□ -0.65
HMGXB4-206ENST00000466438 ZFP69Q49AA0 526 aa11□□□□□ -0.65
HMGXB4-206ENST00000466438 AKIRIN2Q53H80 203 aa11□□□□□ -0.65
HMGXB4-206ENST00000466438 TMEM268Q5VZI3 342 aa11□□□□□ -0.65
HMGXB4-206ENST00000466438 UNQ5815/PRO19632Q6UWF5 114 aa11□□□□□ -0.65
HMGXB4-206ENST00000466438 ABHD5Q8WTS1 349 aa11□□□□□ -0.65
HMGXB4-206ENST00000466438 TMEM56Q96MV1 263 aa11□□□□□ -0.65
HMGXB4-206ENST00000466438 SPIN2AQ99865 258 aa11□□□□□ -0.65
HMGXB4-206ENST00000466438 SPIN2BQ9BPZ2 258 aa11□□□□□ -0.65
HMGXB4-206ENST00000466438 TMEM56-RWDD3S4R434 201 aa11□□□□□ -0.65
HMGXB4-206ENST00000466438 CCSO14618 274 aa10.99□□□□□ -0.65
HMGXB4-206ENST00000466438 CDS2O95674 445 aa10.99□□□□□ -0.65
HMGXB4-206ENST00000466438 HOXB5P09067 269 aa10.99□□□□□ -0.65
HMGXB4-206ENST00000466438 DUTP33316 252 aaKnown RBP10.99□□□□□ -0.65
HMGXB4-206ENST00000466438 TCTAP57738 103 aa10.99□□□□□ -0.65
HMGXB4-206ENST00000466438 TAGLNQ01995 201 aaKnown RBP10.99□□□□□ -0.65
HMGXB4-206ENST00000466438 FGL1Q08830 312 aa10.99□□□□□ -0.65
HMGXB4-206ENST00000466438 RPL39P5Q59GN2 51 aa10.99□□□□□ -0.65
HMGXB4-206ENST00000466438 PPP1R27Q86WC6 154 aa10.99□□□□□ -0.65
HMGXB4-206ENST00000466438 LINC00528Q8N1L1 170 aa10.99□□□□□ -0.65
HMGXB4-206ENST00000466438 SLC35G3Q8N808 338 aa10.99□□□□□ -0.65
HMGXB4-206ENST00000466438 RNASE11Q8TAA1 199 aaKnown RBP10.99□□□□□ -0.65
HMGXB4-206ENST00000466438 RNF183Q96D59 192 aa10.99□□□□□ -0.65
HMGXB4-206ENST00000466438 FYTTD1Q96QD9 318 aaKnown RBP10.99□□□□□ -0.65
HMGXB4-206ENST00000466438 OR2A7Q96R45 310 aa10.99□□□□□ -0.65
HMGXB4-206ENST00000466438 PRR13Q9NZ81 148 aa10.99□□□□□ -0.65
HMGXB4-206ENST00000466438 COMMD9Q9P000 198 aa10.99□□□□□ -0.65
HMGXB4-206ENST00000466438 PEMTQ9UBM1 199 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms