RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 C4orf3Q8WVX3 66 aa9.74□□□□□ -0.85
HDAC4-207ENST00000461113 KLK15Q9H2R5 256 aa9.74□□□□□ -0.85
HDAC4-207ENST00000461113 NDUFA4L2Q9NRX3 87 aa9.74□□□□□ -0.85
HDAC4-207ENST00000461113 FLVCR2Q9UPI3 526 aa9.74□□□□□ -0.85
HDAC4-207ENST00000461113 TRAV6A0A075B6T7 132 aa9.73□□□□□ -0.85
HDAC4-207ENST00000461113 C9orf170A2RU37 121 aa9.73□□□□□ -0.85
HDAC4-207ENST00000461113 TEX22C9J3V5 150 aa9.73□□□□□ -0.85
HDAC4-207ENST00000461113 SOX15O60248 233 aa9.73□□□□□ -0.85
HDAC4-207ENST00000461113 MYOD1P15172 320 aa9.73□□□□□ -0.85
HDAC4-207ENST00000461113 ANXA7P20073 488 aaKnown RBP9.73□□□□□ -0.85
HDAC4-207ENST00000461113 HOXD3P31249 432 aaPredicted RBP9.73□□□□□ -0.85
HDAC4-207ENST00000461113 BTCP35070 178 aa9.73□□□□□ -0.85
HDAC4-207ENST00000461113 SNCAP37840 140 aa9.73□□□□□ -0.85
HDAC4-207ENST00000461113 MYCNOSP40205 109 aa9.73□□□□□ -0.85
HDAC4-207ENST00000461113 HOXA1P49639 335 aaPredicted RBP9.73□□□□□ -0.85
HDAC4-207ENST00000461113 SUB1P53999 127 aaKnown RBP eCLIP9.73□□□□□ -0.85
HDAC4-207ENST00000461113 SUPT4H1P63272 117 aaKnown RBP9.73□□□□□ -0.85
HDAC4-207ENST00000461113 PLET1Q6UQ28 207 aa9.73□□□□□ -0.85
HDAC4-207ENST00000461113 LYG2Q86SG7 212 aa9.73□□□□□ -0.85
HDAC4-207ENST00000461113 ALX4Q9H161 411 aaPredicted RBP9.73□□□□□ -0.85
HDAC4-207ENST00000461113 NUDT15Q9NV35 164 aa9.73□□□□□ -0.85
HDAC4-207ENST00000461113 CACNG5Q9UF02 275 aa9.73□□□□□ -0.85
HDAC4-207ENST00000461113 TBC1D24Q9ULP9 559 aa9.73□□□□□ -0.85
HDAC4-207ENST00000461113 TMED3Q9Y3Q3 217 aa9.73□□□□□ -0.85
HDAC4-207ENST00000461113 A0A0B4J293 547 aa9.72□□□□□ -0.85
HDAC4-207ENST00000461113 A0A1B0GU03 582 aa9.72□□□□□ -0.85
HDAC4-207ENST00000461113 ST8SIA3O43173 380 aa9.72□□□□□ -0.85
HDAC4-207ENST00000461113 CRYGCP07315 174 aa9.72□□□□□ -0.85
HDAC4-207ENST00000461113 AREGP15514 252 aa9.72□□□□□ -0.85
HDAC4-207ENST00000461113 SPCS3P61009 180 aa9.72□□□□□ -0.85
HDAC4-207ENST00000461113 RHOGP84095 191 aa9.72□□□□□ -0.85
HDAC4-207ENST00000461113 PRCDQ00LT1 54 aa9.72□□□□□ -0.85
HDAC4-207ENST00000461113 DHRS2Q13268 280 aa9.72□□□□□ -0.85
HDAC4-207ENST00000461113 SMCO1Q147U7 214 aa9.72□□□□□ -0.85
HDAC4-207ENST00000461113 IZUMO4Q1ZYL8 232 aa9.72□□□□□ -0.85
HDAC4-207ENST00000461113 ASPHD1Q5U4P2 390 aa9.72□□□□□ -0.85
HDAC4-207ENST00000461113 C8orf86Q6ZUL3 223 aa9.72□□□□□ -0.85
HDAC4-207ENST00000461113 LYZL2Q7Z4W2 148 aa9.72□□□□□ -0.85
HDAC4-207ENST00000461113 LRTM2Q8N967 370 aa9.72□□□□□ -0.85
HDAC4-207ENST00000461113 NECAP1Q8NC96 275 aa9.72□□□□□ -0.85
HDAC4-207ENST00000461113 OR1S1Q8NH92 325 aa9.72□□□□□ -0.85
HDAC4-207ENST00000461113 LHFPL5Q8TAF8 219 aa9.72□□□□□ -0.85
HDAC4-207ENST00000461113 MUC7Q8TAX7 377 aa9.72□□□□□ -0.85
HDAC4-207ENST00000461113 GPR146Q96CH1 333 aa9.72□□□□□ -0.85
HDAC4-207ENST00000461113 OR5B12Q96R08 314 aa9.72□□□□□ -0.85
HDAC4-207ENST00000461113 GPN1Q9HCN4 374 aaPredicted RBP9.72□□□□□ -0.85
HDAC4-207ENST00000461113 PRR13Q9NZ81 148 aa9.72□□□□□ -0.85
HDAC4-207ENST00000461113 LYSTQ99698 3801 aa9.71□□□□□ -0.85
HDAC4-207ENST00000461113 IGLC7A0M8Q6 106 aa9.71□□□□□ -0.86
HDAC4-207ENST00000461113 CEBPZOSA8MTT3 80 aa9.71□□□□□ -0.86
HDAC4-207ENST00000461113 E7EUB6 86 aa9.71□□□□□ -0.86
HDAC4-207ENST00000461113 CCL24O00175 119 aa9.71□□□□□ -0.86
HDAC4-207ENST00000461113 OR2J3O76001 311 aa9.71□□□□□ -0.86
HDAC4-207ENST00000461113 DUS4LO95620 317 aaKnown RBP9.71□□□□□ -0.86
HDAC4-207ENST00000461113 IGHV3-11P01762 117 aa9.71□□□□□ -0.86
HDAC4-207ENST00000461113 REG1AP05451 166 aa9.71□□□□□ -0.86
HDAC4-207ENST00000461113 LGALS1P09382 135 aaKnown RBP9.71□□□□□ -0.86
HDAC4-207ENST00000461113 P0C879 139 aa9.71□□□□□ -0.86
HDAC4-207ENST00000461113 CTRB1P17538 263 aa9.71□□□□□ -0.86
HDAC4-207ENST00000461113 CTRB2Q6GPI1 263 aa9.71□□□□□ -0.86
HDAC4-207ENST00000461113 SLC25A24Q6NUK1 477 aa9.71□□□□□ -0.86
HDAC4-207ENST00000461113 OR10W1Q8NGF6 305 aa9.71□□□□□ -0.86
HDAC4-207ENST00000461113 OR1N2Q8NGR9 330 aa9.71□□□□□ -0.86
HDAC4-207ENST00000461113 OR52E5Q8NH55 327 aa9.71□□□□□ -0.86
HDAC4-207ENST00000461113 MYOZ3Q8TDC0 251 aa9.71□□□□□ -0.86
HDAC4-207ENST00000461113 CXorf58Q96LI9 332 aa9.71□□□□□ -0.86
HDAC4-207ENST00000461113 HIPK2Q9H2X6 1198 aa9.71□□□□□ -0.86
HDAC4-207ENST00000461113 FBXL7Q9UJT9 491 aa9.71□□□□□ -0.86
HDAC4-207ENST00000461113 MED6O75586 246 aa9.7□□□□□ -0.86
HDAC4-207ENST00000461113 PRH1P02810 166 aa9.7□□□□□ -0.86
HDAC4-207ENST00000461113 HSPB1P04792 205 aaKnown RBP9.7□□□□□ -0.86
HDAC4-207ENST00000461113 HOXB5P09067 269 aa9.7□□□□□ -0.86
HDAC4-207ENST00000461113 OR8U8P0C7N1 319 aa9.7□□□□□ -0.86
HDAC4-207ENST00000461113 SLC25A6P12236 298 aa9.7□□□□□ -0.86
HDAC4-207ENST00000461113 RUNX1Q01196 453 aa9.7□□□□□ -0.86
HDAC4-207ENST00000461113 EGFEM1PQ0D2K5 195 aa9.7□□□□□ -0.86
HDAC4-207ENST00000461113 ANKRD55Q3KP44 614 aa9.7□□□□□ -0.86
HDAC4-207ENST00000461113 NOXA1Q86UR1 476 aa9.7□□□□□ -0.86
HDAC4-207ENST00000461113 EEF1AKMT3Q96AZ1 226 aa9.7□□□□□ -0.86
HDAC4-207ENST00000461113 RCC1LQ96I51 464 aaKnown RBP9.7□□□□□ -0.86
HDAC4-207ENST00000461113 GNB4Q9HAV0 340 aa9.7□□□□□ -0.86
HDAC4-207ENST00000461113 RANGRFQ9HD47 186 aaPredicted RBP9.7□□□□□ -0.86
HDAC4-207ENST00000461113 HEYLQ9NQ87 328 aaPredicted RBP9.7□□□□□ -0.86
HDAC4-207ENST00000461113 TRBV9A0A0B4J1U6 114 aa9.69□□□□□ -0.86
HDAC4-207ENST00000461113 A0A0G2JRQ6 117 aa9.69□□□□□ -0.86
HDAC4-207ENST00000461113 A0A1B0GW64 132 aa9.69□□□□□ -0.86
HDAC4-207ENST00000461113 DBX1A6NMT0 343 aa9.69□□□□□ -0.86
HDAC4-207ENST00000461113 LINC01619G3V211 115 aa9.69□□□□□ -0.86
HDAC4-207ENST00000461113 ZP3P21754 424 aa9.69□□□□□ -0.86
HDAC4-207ENST00000461113 ZNF616Q08AN1 781 aa9.69□□□□□ -0.86
HDAC4-207ENST00000461113 DCTN2Q13561 401 aaKnown RBP9.69□□□□□ -0.86
HDAC4-207ENST00000461113 EXOSC2Q13868 293 aaKnown RBP9.69□□□□□ -0.86
HDAC4-207ENST00000461113 TATDN3Q17R31 274 aa9.69□□□□□ -0.86
HDAC4-207ENST00000461113 C15orf32Q32M92 178 aa9.69□□□□□ -0.86
HDAC4-207ENST00000461113 NMSQ5H8A3 153 aa9.69□□□□□ -0.86
HDAC4-207ENST00000461113 OR2C3Q8N628 320 aa9.69□□□□□ -0.86
HDAC4-207ENST00000461113 UXS1Q8NBZ7 420 aa9.69□□□□□ -0.86
HDAC4-207ENST00000461113 DUSP18Q8NEJ0 188 aa9.69□□□□□ -0.86
HDAC4-207ENST00000461113 OR11H1Q8NG94 326 aa9.69□□□□□ -0.86
HDAC4-207ENST00000461113 OR1P1Q8NH06 330 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms