RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 TMEM229BQ8NBD8 167 aa14.24□□□□□ -0.13
COL5A1-203ENST00000460264 UXS1Q8NBZ7 420 aa14.24□□□□□ -0.13
COL5A1-203ENST00000460264 OR4A16Q8NH70 328 aa14.24□□□□□ -0.13
COL5A1-203ENST00000460264 MUC7Q8TAX7 377 aa14.24□□□□□ -0.13
COL5A1-203ENST00000460264 RAB2BQ8WUD1 216 aa14.24□□□□□ -0.13
COL5A1-203ENST00000460264 BSCL2Q96G97 398 aaPredicted RBP14.24□□□□□ -0.13
COL5A1-203ENST00000460264 ZNF436Q9C0F3 470 aaPredicted RBP14.24□□□□□ -0.13
COL5A1-203ENST00000460264 PALMDQ9NP74 551 aa14.24□□□□□ -0.13
COL5A1-203ENST00000460264 DNAH7Q8WXX0 4024 aa14.24□□□□□ -0.13
COL5A1-203ENST00000460264 IGHV3-21A0A0B4J1V1 117 aa14.23□□□□□ -0.13
COL5A1-203ENST00000460264 SSBP1Q04837 148 aaKnown RBP14.23□□□□□ -0.13
COL5A1-203ENST00000460264 BTNL8Q6UX41 500 aa14.23□□□□□ -0.13
COL5A1-203ENST00000460264 OR1L6Q8NGR2 347 aa14.23□□□□□ -0.13
COL5A1-203ENST00000460264 OR1P1Q8NH06 330 aa14.23□□□□□ -0.13
COL5A1-203ENST00000460264 SCARB1Q8WTV0 552 aa14.23□□□□□ -0.13
COL5A1-203ENST00000460264 TMEM190Q8WZ59 177 aa14.23□□□□□ -0.13
COL5A1-203ENST00000460264 MARC2Q969Z3 335 aa14.23□□□□□ -0.13
COL5A1-203ENST00000460264 CITED4Q96RK1 184 aa14.23□□□□□ -0.13
COL5A1-203ENST00000460264 TP53RKQ96S44 253 aa14.23□□□□□ -0.13
COL5A1-203ENST00000460264 ATP6V0BQ99437 205 aa14.23□□□□□ -0.13
COL5A1-203ENST00000460264 SPATA25Q9BR10 227 aa14.23□□□□□ -0.13
COL5A1-203ENST00000460264 WFDC10AQ9H1F0 79 aa14.23□□□□□ -0.13
COL5A1-203ENST00000460264 C21orf62Q9NYP8 219 aa14.23□□□□□ -0.13
COL5A1-203ENST00000460264 CCDC59Q9P031 241 aaKnown RBP14.23□□□□□ -0.13
COL5A1-203ENST00000460264 F8W735 103 aaPredicted RBP14.22□□□□□ -0.13
COL5A1-203ENST00000460264 RAB3DO95716 219 aa14.22□□□□□ -0.13
COL5A1-203ENST00000460264 IGKV1-5P01602 117 aa14.22□□□□□ -0.13
COL5A1-203ENST00000460264 C8orf88P0DMB2 117 aa14.22□□□□□ -0.13
COL5A1-203ENST00000460264 TMBIM6P55061 237 aa14.22□□□□□ -0.13
COL5A1-203ENST00000460264 ELLP55199 621 aaPredicted RBP14.22□□□□□ -0.13
COL5A1-203ENST00000460264 MRPS10P82664 201 aaKnown RBP14.22□□□□□ -0.13
COL5A1-203ENST00000460264 PRCDQ00LT1 54 aa14.22□□□□□ -0.13
COL5A1-203ENST00000460264 IZUMO4Q1ZYL8 232 aa14.22□□□□□ -0.13
COL5A1-203ENST00000460264 STEAP1BQ6NZ63 245 aa14.22□□□□□ -0.13
COL5A1-203ENST00000460264 SPSB3Q6PJ21 355 aa14.22□□□□□ -0.13
COL5A1-203ENST00000460264 LINC00322Q6ZN03 302 aaPredicted RBP14.22□□□□□ -0.13
COL5A1-203ENST00000460264 OR2C3Q8N628 320 aa14.22□□□□□ -0.13
COL5A1-203ENST00000460264 OR13C8Q8NGS7 320 aa14.22□□□□□ -0.13
COL5A1-203ENST00000460264 TERB2Q8NHR7 220 aa14.22□□□□□ -0.13
COL5A1-203ENST00000460264 DYNC2LI1Q8TCX1 351 aa14.22□□□□□ -0.13
COL5A1-203ENST00000460264 SMIM4Q8WVI0 70 aa14.22□□□□□ -0.13
COL5A1-203ENST00000460264 BCL7BQ9BQE9 202 aa14.22□□□□□ -0.13
COL5A1-203ENST00000460264 UFC1Q9Y3C8 167 aa14.22□□□□□ -0.13
COL5A1-203ENST00000460264 P0C879 139 aa14.21□□□□□ -0.13
COL5A1-203ENST00000460264 SCGB2B2Q4G0G5 96 aa14.21□□□□□ -0.13
COL5A1-203ENST00000460264 DEFB125Q8N687 156 aa14.21□□□□□ -0.13
COL5A1-203ENST00000460264 ZNF114Q8NC26 417 aa14.21□□□□□ -0.13
COL5A1-203ENST00000460264 ZFAND1Q8TCF1 268 aa14.21□□□□□ -0.13
COL5A1-203ENST00000460264 CHRDL1Q9BU40 450 aa14.21□□□□□ -0.13
COL5A1-203ENST00000460264 MRPL27Q9P0M9 148 aaKnown RBP14.21□□□□□ -0.13
COL5A1-203ENST00000460264 CEPT1Q9Y6K0 416 aa14.21□□□□□ -0.13
COL5A1-203ENST00000460264 C3orf85A0A1B0GTC6 90 aa14.2□□□□□ -0.14
COL5A1-203ENST00000460264 OR11H12B2RN74 326 aa14.2□□□□□ -0.14
COL5A1-203ENST00000460264 SCAF4O95104 1147 aaKnown RBP14.2□□□□□ -0.14
COL5A1-203ENST00000460264 ADMP35318 185 aa14.2□□□□□ -0.14
COL5A1-203ENST00000460264 HSPE1P61604 102 aaKnown RBP14.2□□□□□ -0.14
COL5A1-203ENST00000460264 FAAP20Q6NZ36 180 aa14.2□□□□□ -0.14
COL5A1-203ENST00000460264 CCDC71LQ8N9Z2 235 aa14.2□□□□□ -0.14
COL5A1-203ENST00000460264 MARCH1Q8TCQ1 289 aa14.2□□□□□ -0.14
COL5A1-203ENST00000460264 COPZ2Q9P299 210 aa14.2□□□□□ -0.14
COL5A1-203ENST00000460264 RBMY1BA6NDE4 496 aaKnown RBP14.19□□□□□ -0.14
COL5A1-203ENST00000460264 RBMY1EA6NEQ0 496 aaKnown RBP14.19□□□□□ -0.14
COL5A1-203ENST00000460264 NDUFA4O00483 81 aa14.19□□□□□ -0.14
COL5A1-203ENST00000460264 RBMY1DP0C7P1 496 aaKnown RBP14.19□□□□□ -0.14
COL5A1-203ENST00000460264 AKR1C2P52895 323 aa14.19□□□□□ -0.14
COL5A1-203ENST00000460264 MEF2DQ14814 521 aa14.19□□□□□ -0.14
COL5A1-203ENST00000460264 Q56UQ5 140 aa14.19□□□□□ -0.14
COL5A1-203ENST00000460264 SLC16A13Q7RTY0 426 aa14.19□□□□□ -0.14
COL5A1-203ENST00000460264 UBAC2Q8NBM4 344 aa14.19□□□□□ -0.14
COL5A1-203ENST00000460264 MISP3Q96FF7 219 aa14.19□□□□□ -0.14
COL5A1-203ENST00000460264 DIRAS2Q96HU8 199 aa14.19□□□□□ -0.14
COL5A1-203ENST00000460264 SRD5A3Q9H8P0 318 aa14.19□□□□□ -0.14
COL5A1-203ENST00000460264 EDA2RQ9HAV5 297 aa14.19□□□□□ -0.14
COL5A1-203ENST00000460264 DAZ1Q9NQZ3 744 aaKnown RBP14.19□□□□□ -0.14
COL5A1-203ENST00000460264 TRAV25A0A0B4J276 109 aa14.18□□□□□ -0.14
COL5A1-203ENST00000460264 I3L2K1 104 aa14.18□□□□□ -0.14
COL5A1-203ENST00000460264 CTDSPLO15194 276 aa14.18□□□□□ -0.14
COL5A1-203ENST00000460264 CTSDP07339 412 aaPredicted RBP14.18□□□□□ -0.14
COL5A1-203ENST00000460264 UCP1P25874 307 aa14.18□□□□□ -0.14
COL5A1-203ENST00000460264 IL18Q14116 193 aa14.18□□□□□ -0.14
COL5A1-203ENST00000460264 SP6Q3SY56 376 aa14.18□□□□□ -0.14
COL5A1-203ENST00000460264 SPINK9Q5DT21 86 aa14.18□□□□□ -0.14
COL5A1-203ENST00000460264 CASC10Q5T4H9 136 aa14.18□□□□□ -0.14
COL5A1-203ENST00000460264 OR52B4Q8NGK2 314 aa14.18□□□□□ -0.14
COL5A1-203ENST00000460264 A0A0B4J293 547 aa14.17□□□□□ -0.14
COL5A1-203ENST00000460264 H3BMQ9 156 aa14.17□□□□□ -0.14
COL5A1-203ENST00000460264 ATG12O94817 140 aa14.17□□□□□ -0.14
COL5A1-203ENST00000460264 CTSGP08311 255 aa14.17□□□□□ -0.14
COL5A1-203ENST00000460264 RPL5P46777 297 aaKnown RBP14.17□□□□□ -0.14
COL5A1-203ENST00000460264 TRIM16LQ309B1 348 aa14.17□□□□□ -0.14
COL5A1-203ENST00000460264 OR4C16Q8NGL9 310 aa14.17□□□□□ -0.14
COL5A1-203ENST00000460264 ZNF414Q96IQ9 312 aa14.17□□□□□ -0.14
COL5A1-203ENST00000460264 SLIRPQ9GZT3 109 aaKnown RBP14.17□□□□□ -0.14
COL5A1-203ENST00000460264 C6orf62Q9GZU0 229 aaPredicted RBP14.17□□□□□ -0.14
COL5A1-203ENST00000460264 HIPK2Q9H2X6 1198 aa14.17□□□□□ -0.14
COL5A1-203ENST00000460264 C5orf66Q9H5L9 145 aa14.17□□□□□ -0.14
COL5A1-203ENST00000460264 RETNQ9HD89 108 aa14.17□□□□□ -0.14
COL5A1-203ENST00000460264 GAR1Q9NY12 217 aaKnown RBP14.17□□□□□ -0.14
COL5A1-203ENST00000460264 RABL2AQ9UBK7 228 aaPredicted RBP14.17□□□□□ -0.14
COL5A1-203ENST00000460264 RABL2BQ9UNT1 228 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms