RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 RBM7Q9Y580 266 aaKnown RBP3.38□□□□□ -1.87
SDCBP-205ENST00000447267 TRAV25A0A0B4J276 109 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 A0A1W2PPE3 182 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 C20orf202A1L168 122 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 TRAPPC13A5PLN9 417 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 FBLL1A6NHQ2 334 aaKnown RBP3.37□□□□□ -1.87
SDCBP-205ENST00000447267 C5orf58C9J3I9 102 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 F8WDY8 70 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 SLC33A1O00400 549 aaPredicted RBP3.37□□□□□ -1.87
SDCBP-205ENST00000447267 RS1O15537 224 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 XRCC2O43543 280 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 SCGB2A1O75556 95 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 OR2A4O95047 310 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 TRGV3P03979 118 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 CD5P06127 495 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 CD2P06729 351 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 UBCP0CG48 685 aaKnown RBP3.37□□□□□ -1.87
SDCBP-205ENST00000447267 ZNF44P15621 663 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 IGFBP3P17936 291 aaPredicted RBP3.37□□□□□ -1.87
SDCBP-205ENST00000447267 RCC1P18754 421 aaPredicted RBP3.37□□□□□ -1.87
SDCBP-205ENST00000447267 S100A3P33764 101 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 OR3A1P47881 315 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 PPT1P50897 306 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 RAB7AP51149 207 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 GABARAPL2P60520 117 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 RPS27AP62979 156 aaKnown RBP3.37□□□□□ -1.87
SDCBP-205ENST00000447267 MRPS10P82664 201 aaKnown RBP3.37□□□□□ -1.87
SDCBP-205ENST00000447267 PDZK1IP1Q13113 114 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 PEA15Q15121 130 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 SLC22A6Q4U2R8 563 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 SPANXN2Q5MJ10 180 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 LRIF1Q5T3J3 769 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 PLCXD3Q63HM9 321 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 OR52W1Q6IF63 320 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 DRAM2Q6UX65 266 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 TIFABQ6ZNK6 161 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 TRAPPC6BQ86SZ2 158 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 CCDC190Q86UF4 302 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 APRG1Q8IVJ8 170 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 DEFB107AQ8IZN7 70 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 CCDC71LQ8N9Z2 235 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 UBAC2Q8NBM4 344 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 UXS1Q8NBZ7 420 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 OR10K1Q8NGX5 313 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 GNPDA2Q8TDQ7 276 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 TMED6Q8WW62 240 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 YIPF6Q96EC8 236 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 REEP6Q96HR9 211 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 C4orf36Q96KX1 117 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 TSSK2Q96PF2 358 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 SDHCQ99643 169 aaPredicted RBP3.37□□□□□ -1.87
SDCBP-205ENST00000447267 FUZQ9BT04 418 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 C1QTNF4Q9BXJ3 329 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 ARV1Q9H2C2 271 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 AUNIPQ9H7T9 357 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 Q9H8V8 135 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 RHOFQ9HBH0 211 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 WFDC1Q9HC57 220 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 MTCH1Q9NZJ7 389 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 ZNF319Q9P2F9 582 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 RHCGQ9UBD6 479 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 ZFP30Q9Y2G7 519 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 GSTK1Q9Y2Q3 226 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 MPC1Q9Y5U8 109 aa3.37□□□□□ -1.87
SDCBP-205ENST00000447267 TRAV27A0A087WT01 109 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 TRAV26-1A0A087WT03 109 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 A0A087WTM6 91 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 IGHV1-3A0A0C4DH29 117 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 TRBV7-9A0A0J9YWB2 115 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 C13orf42A0A1B0GVH6 325 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 FAM230AA0A1W2PPH8 454 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 C2orf70A6NJV1 201 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 COLCA2A8K830 154 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 DISC1C4P0D8 188 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 PANO1I0J062 215 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 GPR31O00270 319 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 ARPC3O15145 178 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 FABP7O15540 132 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 SSNA1O43805 119 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 TYROBPO43914 113 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 AIREO43918 545 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 TNFRSF6BO95407 300 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 SCGB1D1O95968 90 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 CST4P01036 141 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 TCRBP04435 133 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 HOXB5P09067 269 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 GTF2F2P13984 249 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 TBPP20226 339 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 FGF7P21781 194 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 NFYBP25208 207 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 GNRHRP30968 328 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 OR1E2P47887 323 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 LINC00315P59091 139 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 OR2B8PP59922 312 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 CDC42P60953 191 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 NCS1P62166 190 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 PPP3R1P63098 170 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 MXD1Q05195 221 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 ZNF816Q0VGE8 651 aaPredicted RBP3.36□□□□□ -1.87
SDCBP-205ENST00000447267 RAB31Q13636 194 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms