RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	PIP4P1	Q86T03	277 aa		5.64	□□□□□ -1.51
TRIM6-205	ENST00000445329	RNF166	Q96A37	237 aa	Predicted RBP	5.64	□□□□□ -1.51
TRIM6-205	ENST00000445329	ELSPBP1	Q96BH3	223 aa		5.64	□□□□□ -1.51
TRIM6-205	ENST00000445329	RASL11B	Q9BPW5	248 aa		5.64	□□□□□ -1.51
TRIM6-205	ENST00000445329		A1L4Q6	167 aa		5.64	□□□□□ -1.51
TRIM6-205	ENST00000445329	SSSCA1	O60232	199 aa		5.64	□□□□□ -1.51
TRIM6-205	ENST00000445329	LDB3	O75112	727 aa		5.64	□□□□□ -1.51
TRIM6-205	ENST00000445329	CISD3	P0C7P0	127 aa		5.64	□□□□□ -1.51
TRIM6-205	ENST00000445329	AMY2B	P19961	511 aa		5.64	□□□□□ -1.51
TRIM6-205	ENST00000445329	HERV-K104	P61576	105 aa		5.64	□□□□□ -1.51
TRIM6-205	ENST00000445329	HERVK_113	P63121	156 aa		5.64	□□□□□ -1.51
TRIM6-205	ENST00000445329	PRSS53	Q2L4Q9	553 aa		5.64	□□□□□ -1.51
TRIM6-205	ENST00000445329	SSX8	Q7RTT4	187 aa		5.64	□□□□□ -1.51
TRIM6-205	ENST00000445329	TMEM252	Q8N6L7	170 aa		5.64	□□□□□ -1.51
TRIM6-205	ENST00000445329	ATP6V0E2	Q8NHE4	81 aa		5.64	□□□□□ -1.51
TRIM6-205	ENST00000445329	MAFA	Q8NHW3	353 aa	Predicted RBP	5.64	□□□□□ -1.51
TRIM6-205	ENST00000445329	PDF	Q9HBH1	243 aa		5.64	□□□□□ -1.51
TRIM6-205	ENST00000445329	SLC39A9	Q9NUM3	307 aa		5.64	□□□□□ -1.51
TRIM6-205	ENST00000445329	IL36B	Q9NZH7	164 aa		5.64	□□□□□ -1.51
TRIM6-205	ENST00000445329	PRO0461	Q9UI25	63 aa		5.64	□□□□□ -1.51
TRIM6-205	ENST00000445329	TCF20	Q9UGU0	1960 aa	Known RBP	5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	KIAA1549L	Q6ZVL6	1849 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	TRAV9-1	A0A075B6T8	112 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	TRAV27	A0A087WT01	109 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329		H3BML4	177 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	PRDX2	P32119	198 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	DLX6	P56179	175 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	SLC38A11	Q08AI6	406 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	C10orf126	Q8N4M7	172 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	SSBP3	Q9BWW4	388 aa	Predicted RBP	5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	C1QTNF5	Q9BXJ0	243 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	FAM60A	Q9NP50	221 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	PRND	Q9UKY0	176 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	OR1A2	Q9Y585	309 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	WDFY4	Q6ZS81	3184 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	TDRD6	O60522	2096 aa	Known RBP	5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	COL4A2	P08572	1712 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	NBR2	O15453	112 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	KLK10	O43240	276 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	GLI4	P10075	376 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	GCSH	P23434	173 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	CFP	P27918	469 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	TAS2R45	P59539	299 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	RPL27	P61353	136 aa	Known RBP	5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	C9orf153	Q5TBE3	101 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	KCTD18	Q6PI47	426 aa	Predicted RBP	5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	HSD11B1L	Q7Z5J1	315 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	PFN4	Q8NHR9	129 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	RPE	Q96AT9	228 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	TIMD4	Q96H15	378 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	BPIFA1	Q9NP55	256 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	FZR1	Q9UM11	496 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	KLK5	Q9Y337	293 aa	Predicted RBP	5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	FANCM	Q8IYD8	2048 aa		5.63	□□□□□ -1.51
TRIM6-205	ENST00000445329	ARHGAP21	Q5T5U3	1957 aa		5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	FAM236A	A0A1B0GUQ0	79 aa		5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	FAM236B	A0A1B0GV22	79 aa		5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	NDUFA7	O95182	113 aa		5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	SP9	P0CG40	484 aa		5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	C8orf88	P0DMB2	117 aa		5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	ATP1B2	P14415	290 aa	Predicted RBP	5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	C1orf61	Q13536	156 aa		5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	EDDM3A	Q14507	147 aa		5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	TMEM219	Q86XT9	240 aa		5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	GAPT	Q8N292	157 aa		5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	MDS2	Q8NDY4	140 aa		5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	ZNRF2	Q8NHG8	242 aa		5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	HOXB13	Q92826	284 aa	Predicted RBP	5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	C4orf45	Q96LM5	186 aa		5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	F5	P12259	2224 aa		5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	NBL1	P41271	181 aa		5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	CAMP	P49913	170 aa		5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	CX3CL1	P78423	397 aa		5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	LINC00173	Q6ZV60	143 aa		5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	OR10J6P	Q8NGY7	276 aa		5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	MCHR1	Q99705	422 aa		5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	TAAR2	Q9P1P5	351 aa		5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	PHF3	Q92576	2039 aa	Known RBP	5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	PLXNB3	Q9ULL4	1909 aa		5.62	□□□□□ -1.51
TRIM6-205	ENST00000445329	SH2D7	A6NKC9	451 aa	Predicted RBP	5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	TMEM262	E9PQX1	116 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	CRX	O43186	299 aa	Predicted RBP	5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	PAGE4	O60829	102 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	SLC25A14	O95258	325 aa	Predicted RBP	5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	CRYAA	P02489	173 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	WAS	P42768	502 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	TNFAIP6	P98066	277 aa	Predicted RBP	5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	GUSBP1	Q15486	140 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	SLC35E4	Q6ICL7	350 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329		Q6ZQT7	251 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	LHFPL1	Q86WI0	220 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	OCC1	Q8TAD7	63 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	CHCHD5	Q9BSY4	110 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	MRPL32	Q9BYC8	188 aa	Known RBP	5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	C20orf141	Q9NUB4	165 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	TAS2R4	Q9NYW5	299 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	RAX	Q9Y2V3	346 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	VPS13A	Q96RL7	3174 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	CRLF1	O75462	422 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	EML2	O95834	649 aa		5.61	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms