RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 MYO10Q9HD67 2058 aa4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 CKAP5Q14008 2032 aa4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 PLXNA2O75051 1894 aa4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 CPMP14384 443 aa4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 CA6P23280 308 aa4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 CNTFRP26992 372 aa4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 SLC25A1P53007 311 aa4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 UBE2NP61088 152 aaKnown RBP4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 DAZAP2Q15038 168 aaPredicted RBP4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 ZNF726P1Q15940 193 aa4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 GLIPR1L1Q6UWM5 242 aa4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 COMMD6Q7Z4G1 85 aa4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 CDC20BQ86Y33 519 aa4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 ZNF433Q8N7K0 673 aaPredicted RBP4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 ZNF615Q8N8J6 731 aa4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 SMRP1Q8NCR6 262 aa4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 OR2T27Q8NH04 317 aa4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 C17orf77Q96MU5 243 aa4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 SIGLEC12Q96PQ1 595 aa4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 RARRES2Q99969 163 aa4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 IFI27L2Q9H2X8 130 aa4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 TMEM9BQ9NQ34 198 aa4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 PRTFDC1Q9NRG1 225 aa4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 VDAC3Q9Y277 283 aa4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 PTPRSQ13332 1948 aa4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 TICRRQ7Z2Z1 1910 aa4.73□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 INAFM1C9JVW0 142 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 P01737 135 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 MAS1P04201 325 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 CTSDP07339 412 aaPredicted RBP4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 RPS4Y1P22090 263 aaKnown RBP4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 ATP6V0CP27449 155 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 SAA4P35542 130 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 HERV-K104P61576 105 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 SRPXP78539 464 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 PRDX1Q06830 199 aaKnown RBP4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 FOXF1Q12946 379 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 ODF3L2Q3SX64 289 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 NOXRED1Q6NXP6 359 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 ZNF429Q86V71 674 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 GVQW1Q8N7I0 195 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 MPLKIPQ8TAP9 179 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 NT5CQ8TCD5 201 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 BLNKQ8WV28 456 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 NRTNQ99748 197 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 PYGO2Q9BRQ0 406 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 ZNF586Q9NXT0 402 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 F6UB75 175 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 J3QRE1 110 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 DHRS3O75911 302 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 CDK2AP2O75956 126 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 ZFAND5O76080 213 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 CT45A10P0DMU9 189 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 HLA-DOBP13765 273 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 LIFP15018 202 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 AQP1P29972 269 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 GABRA3P34903 492 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 PSG7Q13046 419 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 LRRC10Q5BKY1 277 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 RPL7L1Q6DKI1 246 aaKnown RBP4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 FER1L6-AS1Q8NA97 138 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 PLEKHB2Q96CS7 222 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 DNAJA3Q96EY1 480 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 SAMD10Q9BYL1 202 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 TMEM222Q9H0R3 208 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 MOB1AQ9H8S9 216 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 TMEM106BQ9NUM4 274 aa4.72□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 NOTCH4Q99466 2003 aa4.71□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 NUMA1Q14980 2115 aa4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 NUP210LQ5VU65 1888 aa4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 A0A087WZ39 114 aa4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 LOC102725191A0A1B0GVB3 256 aa4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 OR4C45A6NMZ5 311 aa4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 NCBP2LA6PVI3 153 aaKnown RBP4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 CPSF4O95639 269 aaKnown RBP4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 SRP19P09132 144 aaKnown RBP4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 SEC11BP0C7V7 166 aa4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 CTRLP40313 264 aa4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 LIM2P55344 173 aa4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 PSG9Q00887 426 aa4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 HSD52Q0P140 79 aa4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 TCEAL5Q5H9L2 206 aa4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 C10orf25Q5T742 122 aa4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 Q6ZN92 141 aa4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 SLC25A42Q86VD7 318 aa4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 OR51A4Q8NGJ6 313 aa4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 OR51G1Q8NGK1 321 aa4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 PP6455Q8WZ26 134 aa4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 TMEM54Q969K7 222 aa4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 MCHR1Q99705 422 aa4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 PRADC1Q9BSG0 188 aa4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 TM2D1Q9BX74 207 aa4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 PRSS22Q9GZN4 317 aa4.71□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 SPAARA0A1B0GVQ0 90 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 IGLC7A0M8Q6 106 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 RBFOX3A6NFN3 312 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 LGALS1P09382 135 aaKnown RBP4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 RND3P61587 244 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 HLA-DRB3P79483 266 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms