RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 DUSP14O95147 198 aaKnown RBP10.06□□□□□ -0.8
NEK1-201ENST00000439128 PPP1R17O96001 155 aa10.06□□□□□ -0.8
NEK1-201ENST00000439128 DTX1Q86Y01 620 aa10.06□□□□□ -0.8
NEK1-201ENST00000439128 ANGPTL6Q8NI99 470 aa10.06□□□□□ -0.8
NEK1-201ENST00000439128 FAM131CQ96AQ9 280 aa10.06□□□□□ -0.8
NEK1-201ENST00000439128 SLC25A38Q96DW6 304 aa10.06□□□□□ -0.8
NEK1-201ENST00000439128 SDF2L1Q9HCN8 221 aa10.06□□□□□ -0.8
NEK1-201ENST00000439128 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.06□□□□□ -0.8
NEK1-201ENST00000439128 E9PQ18 207 aa10.06□□□□□ -0.8
NEK1-201ENST00000439128 H7C1H1 209 aa10.06□□□□□ -0.8
NEK1-201ENST00000439128 COX19Q49B96 90 aa10.06□□□□□ -0.8
NEK1-201ENST00000439128 LEMD1Q68G75 181 aa10.06□□□□□ -0.8
NEK1-201ENST00000439128 FAM24BQ8N5W8 94 aa10.06□□□□□ -0.8
NEK1-201ENST00000439128 TM2D1Q9BX74 207 aa10.06□□□□□ -0.8
NEK1-201ENST00000439128 KLK15Q9H2R5 256 aa10.06□□□□□ -0.8
NEK1-201ENST00000439128 MDC1Q14676 2089 aaKnown RBP10.05□□□□□ -0.8
NEK1-201ENST00000439128 UCP3P55916 312 aa10.05□□□□□ -0.8
NEK1-201ENST00000439128 TMEM187Q14656 261 aa10.05□□□□□ -0.8
NEK1-201ENST00000439128 PSMG4Q5JS54 123 aa10.05□□□□□ -0.8
NEK1-201ENST00000439128 SMIM8Q96KF7 97 aa10.05□□□□□ -0.8
NEK1-201ENST00000439128 REG4Q9BYZ8 158 aa10.05□□□□□ -0.8
NEK1-201ENST00000439128 CRPP02741 224 aa10.05□□□□□ -0.8
NEK1-201ENST00000439128 TCTAP57738 103 aa10.05□□□□□ -0.8
NEK1-201ENST00000439128 SAPCD1Q5SSQ6 148 aa10.05□□□□□ -0.8
NEK1-201ENST00000439128 RGP1Q92546 391 aaPredicted RBP10.05□□□□□ -0.8
NEK1-201ENST00000439128 C5orf66Q9H5L9 145 aa10.05□□□□□ -0.8
NEK1-201ENST00000439128 GEMIN7Q9H840 131 aaKnown RBP10.05□□□□□ -0.8
NEK1-201ENST00000439128 RNASE1P07998 156 aaKnown RBP10.05□□□□□ -0.8
NEK1-201ENST00000439128 SEC11BP0C7V7 166 aa10.05□□□□□ -0.8
NEK1-201ENST00000439128 CRYBB3P26998 211 aa10.05□□□□□ -0.8
NEK1-201ENST00000439128 CCKARP32238 428 aa10.05□□□□□ -0.8
NEK1-201ENST00000439128 SUMO2P61956 95 aaKnown RBP10.05□□□□□ -0.8
NEK1-201ENST00000439128 KIR2DL4Q99706 377 aa10.05□□□□□ -0.8
NEK1-201ENST00000439128 C19orf24Q9BVV8 132 aa10.05□□□□□ -0.8
NEK1-201ENST00000439128 GSX1Q9H4S2 264 aaPredicted RBP10.05□□□□□ -0.8
NEK1-201ENST00000439128 C5orf52A6NGY3 159 aa10.05□□□□□ -0.8
NEK1-201ENST00000439128 UPK2O00526 184 aa10.05□□□□□ -0.8
NEK1-201ENST00000439128 IGFBP2P18065 325 aa10.05□□□□□ -0.8
NEK1-201ENST00000439128 MEIG1Q5JSS6 88 aa10.05□□□□□ -0.8
NEK1-201ENST00000439128 OR5AN1Q8NGI8 311 aa10.05□□□□□ -0.8
NEK1-201ENST00000439128 TICRRQ7Z2Z1 1910 aa10.04□□□□□ -0.8
NEK1-201ENST00000439128 IL6RP08887 468 aaPredicted RBP10.04□□□□□ -0.8
NEK1-201ENST00000439128 SAA4P35542 130 aa10.04□□□□□ -0.8
NEK1-201ENST00000439128 MUC21Q5SSG8 566 aa10.04□□□□□ -0.8
NEK1-201ENST00000439128 SRRM5B3KS81 715 aa10.04□□□□□ -0.8
NEK1-201ENST00000439128 PSCAO43653 123 aa10.04□□□□□ -0.8
NEK1-201ENST00000439128 LYPD2Q6UXB3 125 aa10.04□□□□□ -0.8
NEK1-201ENST00000439128 ZNF497Q6ZNH5 498 aa10.04□□□□□ -0.8
NEK1-201ENST00000439128 TCF24Q7RTU0 167 aa10.04□□□□□ -0.8
NEK1-201ENST00000439128 GREB1Q4ZG55 1949 aa10.04□□□□□ -0.8
NEK1-201ENST00000439128 A0A1B0GTI1 187 aa10.04□□□□□ -0.8
NEK1-201ENST00000439128 CLPSP04118 112 aa10.04□□□□□ -0.8
NEK1-201ENST00000439128 ZNF600Q6ZNG1 722 aa10.04□□□□□ -0.8
NEK1-201ENST00000439128 RNASEH2CQ8TDP1 164 aaKnown RBP10.04□□□□□ -0.8
NEK1-201ENST00000439128 GATAD1Q8WUU5 269 aa10.04□□□□□ -0.8
NEK1-201ENST00000439128 TBX15Q96SF7 602 aa10.04□□□□□ -0.8
NEK1-201ENST00000439128 HSPB8Q9UJY1 196 aa10.04□□□□□ -0.8
NEK1-201ENST00000439128 TRAV24A0A0B4J272 114 aa10.03□□□□□ -0.8
NEK1-201ENST00000439128 IGHV1-3A0A0C4DH29 117 aa10.03□□□□□ -0.8
NEK1-201ENST00000439128 CD7P09564 240 aa10.03□□□□□ -0.8
NEK1-201ENST00000439128 GCSHP23434 173 aa10.03□□□□□ -0.8
NEK1-201ENST00000439128 HNRNPA3P51991 378 aaKnown RBP10.03□□□□□ -0.8
NEK1-201ENST00000439128 B3GALT5-AS1P59052 145 aa10.03□□□□□ -0.8
NEK1-201ENST00000439128 PMS2P11Q13670 270 aa10.03□□□□□ -0.8
NEK1-201ENST00000439128 DHRS11Q6UWP2 260 aa10.03□□□□□ -0.8
NEK1-201ENST00000439128 OR11H7Q8NGC8 314 aa10.03□□□□□ -0.8
NEK1-201ENST00000439128 NPIPB7O75200 414 aa10.03□□□□□ -0.8
NEK1-201ENST00000439128 BCL2P10415 239 aa10.03□□□□□ -0.8
NEK1-201ENST00000439128 PAX1P15863 534 aa10.03□□□□□ -0.8
NEK1-201ENST00000439128 RPL29P47914 159 aaKnown RBP10.03□□□□□ -0.8
NEK1-201ENST00000439128 DTX2Q86UW9 622 aa10.03□□□□□ -0.8
NEK1-201ENST00000439128 TMEM191AQ9H0A3 160 aa10.03□□□□□ -0.8
NEK1-201ENST00000439128 TMEM155Q4W5P6 130 aa10.03□□□□□ -0.8
NEK1-201ENST00000439128 OR9G4Q8NGQ1 327 aa10.03□□□□□ -0.8
NEK1-201ENST00000439128 ALX4Q9H161 411 aaPredicted RBP10.03□□□□□ -0.8
NEK1-201ENST00000439128 MAP1LC3AQ9H492 121 aa10.03□□□□□ -0.8
NEK1-201ENST00000439128 TBL2Q9Y4P3 447 aaKnown RBP10.03□□□□□ -0.8
NEK1-201ENST00000439128 FNDC1Q4ZHG4 1894 aaPredicted RBP10.03□□□□□ -0.8
NEK1-201ENST00000439128 NBEAP1P0C6P0 100 aa10.02□□□□□ -0.8
NEK1-201ENST00000439128 EGR1P18146 543 aa10.02□□□□□ -0.8
NEK1-201ENST00000439128 RAB24Q969Q5 203 aa10.02□□□□□ -0.8
NEK1-201ENST00000439128 GCGP01275 180 aa10.02□□□□□ -0.81
NEK1-201ENST00000439128 TDGF1P13385 188 aa10.02□□□□□ -0.81
NEK1-201ENST00000439128 MALP21145 153 aa10.02□□□□□ -0.81
NEK1-201ENST00000439128 OOSP1A8MZH6 123 aa10.02□□□□□ -0.81
NEK1-201ENST00000439128 ELOBQ15370 118 aa10.02□□□□□ -0.81
NEK1-201ENST00000439128 CEP250Q9BV73 2442 aa10.02□□□□□ -0.81
NEK1-201ENST00000439128 C15orf32Q32M92 178 aa10.02□□□□□ -0.81
NEK1-201ENST00000439128 RPS11P62280 158 aaKnown RBP eCLIP10.02□□□□□ -0.81
NEK1-201ENST00000439128 PLA2G10O15496 165 aa10.01□□□□□ -0.81
NEK1-201ENST00000439128 RIPPLY3P57055 190 aa10.01□□□□□ -0.81
NEK1-201ENST00000439128 ZNF79Q15937 498 aa10.01□□□□□ -0.81
NEK1-201ENST00000439128 CLLU1Q5K131 121 aa10.01□□□□□ -0.81
NEK1-201ENST00000439128 ASCL4Q6XD76 172 aa10.01□□□□□ -0.81
NEK1-201ENST00000439128 ZNF257Q9Y2Q1 563 aa10.01□□□□□ -0.81
NEK1-201ENST00000439128 PTPRFP10586 1907 aa10.01□□□□□ -0.81
NEK1-201ENST00000439128 GATA2P23769 480 aaPredicted RBP10.01□□□□□ -0.81
NEK1-201ENST00000439128 GAS1P54826 345 aa10.01□□□□□ -0.81
NEK1-201ENST00000439128 FAM71F2Q6NXP2 309 aa10.01□□□□□ -0.81
NEK1-201ENST00000439128 OR52E5Q8NH55 327 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms