RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 BTF3P20290 206 aaKnown RBP6.8□□□□□ -1.32
SMPD4-208ENST00000439029 DCKP27707 260 aa6.8□□□□□ -1.32
SMPD4-208ENST00000439029 GYS2P54840 703 aa6.8□□□□□ -1.32
SMPD4-208ENST00000439029 CCL18P55774 89 aa6.8□□□□□ -1.32
SMPD4-208ENST00000439029 CLDN12P56749 244 aa6.8□□□□□ -1.32
SMPD4-208ENST00000439029 DAD1P61803 113 aa6.8□□□□□ -1.32
SMPD4-208ENST00000439029 ZNF705AQ6ZN79 300 aaPredicted RBP6.8□□□□□ -1.32
SMPD4-208ENST00000439029 CBR4Q8N4T8 237 aa6.8□□□□□ -1.32
SMPD4-208ENST00000439029 SLC25A46Q96AG3 418 aa6.8□□□□□ -1.32
SMPD4-208ENST00000439029 CENPNQ96H22 339 aaPredicted RBP6.8□□□□□ -1.32
SMPD4-208ENST00000439029 Q9H8V8 135 aa6.8□□□□□ -1.32
SMPD4-208ENST00000439029 YTHDF2Q9Y5A9 579 aaKnown RBP6.8□□□□□ -1.32
SMPD4-208ENST00000439029 F11RQ9Y624 299 aaKnown RBP6.8□□□□□ -1.32
SMPD4-208ENST00000439029 RFNGQ9Y644 331 aa6.8□□□□□ -1.32
SMPD4-208ENST00000439029 TEX50A0A1B0GTY4 177 aa6.79□□□□□ -1.32
SMPD4-208ENST00000439029 KRTAP29-1A8MX34 341 aaPredicted RBP6.79□□□□□ -1.32
SMPD4-208ENST00000439029 CD5P06127 495 aa6.79□□□□□ -1.32
SMPD4-208ENST00000439029 CDK1P06493 297 aa6.79□□□□□ -1.32
SMPD4-208ENST00000439029 GNB3P16520 340 aa6.79□□□□□ -1.32
SMPD4-208ENST00000439029 DEFB1P60022 68 aa6.79□□□□□ -1.32
SMPD4-208ENST00000439029 GNGT1P63211 74 aa6.79□□□□□ -1.32
SMPD4-208ENST00000439029 EIF4EBP1Q13541 118 aaPredicted RBP6.79□□□□□ -1.32
SMPD4-208ENST00000439029 ICAM4Q14773 271 aa6.79□□□□□ -1.32
SMPD4-208ENST00000439029 ACSM3Q53FZ2 586 aa6.79□□□□□ -1.32
SMPD4-208ENST00000439029 ZNF773Q6PK81 442 aa6.79□□□□□ -1.32
SMPD4-208ENST00000439029 SSX7Q7RTT5 188 aa6.79□□□□□ -1.32
SMPD4-208ENST00000439029 ZNF485Q8NCK3 441 aa6.79□□□□□ -1.32
SMPD4-208ENST00000439029 MISP3Q96FF7 219 aa6.79□□□□□ -1.32
SMPD4-208ENST00000439029 UHRF2Q96PU4 802 aa6.79□□□□□ -1.32
SMPD4-208ENST00000439029 HSD17B10Q99714 261 aaKnown RBP6.79□□□□□ -1.32
SMPD4-208ENST00000439029 GINS3Q9BRX5 216 aa6.79□□□□□ -1.32
SMPD4-208ENST00000439029 C1QTNF4Q9BXJ3 329 aa6.79□□□□□ -1.32
SMPD4-208ENST00000439029 NXF2Q9GZY0 626 aaKnown RBP6.79□□□□□ -1.32
SMPD4-208ENST00000439029 PLGRKTQ9HBL7 147 aa6.79□□□□□ -1.32
SMPD4-208ENST00000439029 ZNF705FA8MVS1 300 aaPredicted RBP6.78□□□□□ -1.32
SMPD4-208ENST00000439029 F5H768 121 aa6.78□□□□□ -1.32
SMPD4-208ENST00000439029 WBP4O75554 376 aaKnown RBP6.78□□□□□ -1.32
SMPD4-208ENST00000439029 HLA-DQB1P01920 261 aa6.78□□□□□ -1.32
SMPD4-208ENST00000439029 ZNF705DP0CH99 300 aaPredicted RBP6.78□□□□□ -1.32
SMPD4-208ENST00000439029 ZNF705BP0CI00 300 aaPredicted RBP6.78□□□□□ -1.32
SMPD4-208ENST00000439029 FCGR1AP12314 374 aa6.78□□□□□ -1.32
SMPD4-208ENST00000439029 MAPK3P27361 379 aaPredicted RBP6.78□□□□□ -1.32
SMPD4-208ENST00000439029 MFAP4P55083 255 aa6.78□□□□□ -1.32
SMPD4-208ENST00000439029 DHRS2Q13268 280 aa6.78□□□□□ -1.32
SMPD4-208ENST00000439029 SPAG16Q8N0X2 631 aa6.78□□□□□ -1.32
SMPD4-208ENST00000439029 OR56B1Q8NGI3 324 aa6.78□□□□□ -1.32
SMPD4-208ENST00000439029 RAB3CQ96E17 227 aa6.78□□□□□ -1.32
SMPD4-208ENST00000439029 GRAMD2BQ96HH9 432 aa6.78□□□□□ -1.32
SMPD4-208ENST00000439029 NEU1Q99519 415 aa6.78□□□□□ -1.32
SMPD4-208ENST00000439029 GFI1Q99684 422 aa6.78□□□□□ -1.32
SMPD4-208ENST00000439029 TMEM140Q9NV12 185 aa6.78□□□□□ -1.32
SMPD4-208ENST00000439029 PGPEP1Q9NXJ5 209 aa6.78□□□□□ -1.32
SMPD4-208ENST00000439029 ELF5Q9UKW6 265 aaPredicted RBP6.78□□□□□ -1.32
SMPD4-208ENST00000439029 NSG2Q9Y328 171 aa6.78□□□□□ -1.32
SMPD4-208ENST00000439029 OR2W1Q9Y3N9 320 aa6.78□□□□□ -1.32
SMPD4-208ENST00000439029 PUS1Q9Y606 427 aaKnown RBP eCLIP6.78□□□□□ -1.32
SMPD4-208ENST00000439029 LOC102723971A0A1B0GUV8 181 aa6.77□□□□□ -1.33
SMPD4-208ENST00000439029 SULT1C2O00338 296 aa6.77□□□□□ -1.33
SMPD4-208ENST00000439029 GNG7O60262 68 aa6.77□□□□□ -1.33
SMPD4-208ENST00000439029 PPP5CP53041 499 aa6.77□□□□□ -1.33
SMPD4-208ENST00000439029 NUTF2P61970 127 aaKnown RBP6.77□□□□□ -1.33
SMPD4-208ENST00000439029 CLINT1Q14677 625 aa6.77□□□□□ -1.33
SMPD4-208ENST00000439029 OXA1LQ15070 435 aa6.77□□□□□ -1.33
SMPD4-208ENST00000439029 RCN1Q15293 331 aa6.77□□□□□ -1.33
SMPD4-208ENST00000439029 DNAL1Q4LDG9 190 aa6.77□□□□□ -1.33
SMPD4-208ENST00000439029 DMBX1Q8NFW5 382 aa6.77□□□□□ -1.33
SMPD4-208ENST00000439029 DCANP1Q8TF63 244 aa6.77□□□□□ -1.33
SMPD4-208ENST00000439029 ATP6V0BQ99437 205 aa6.77□□□□□ -1.33
SMPD4-208ENST00000439029 ZFAND3Q9H8U3 227 aa6.77□□□□□ -1.33
SMPD4-208ENST00000439029 ZNF586Q9NXT0 402 aa6.77□□□□□ -1.33
SMPD4-208ENST00000439029 DIMT1Q9UNQ2 313 aaKnown RBP6.77□□□□□ -1.33
SMPD4-208ENST00000439029 AK6Q9Y3D8 172 aaKnown RBP6.77□□□□□ -1.33
SMPD4-208ENST00000439029 A0A1B0GU03 582 aa6.76□□□□□ -1.33
SMPD4-208ENST00000439029 TEX48A0A1B0GUV7 120 aa6.76□□□□□ -1.33
SMPD4-208ENST00000439029 HELTA6NFD8 242 aa6.76□□□□□ -1.33
SMPD4-208ENST00000439029 SMIM9A6NGZ8 99 aa6.76□□□□□ -1.33
SMPD4-208ENST00000439029 H3BMM0 161 aa6.76□□□□□ -1.33
SMPD4-208ENST00000439029 I3L2K1 104 aa6.76□□□□□ -1.33
SMPD4-208ENST00000439029 DENRO43583 198 aaKnown RBP6.76□□□□□ -1.33
SMPD4-208ENST00000439029 DIRAS3O95661 229 aa6.76□□□□□ -1.33
SMPD4-208ENST00000439029 MT-CO2P00403 227 aa6.76□□□□□ -1.33
SMPD4-208ENST00000439029 IFNA5P01569 189 aa6.76□□□□□ -1.33
SMPD4-208ENST00000439029 DEFB130BP0DP73 79 aa6.76□□□□□ -1.33
SMPD4-208ENST00000439029 DEFB130AP0DP74 79 aa6.76□□□□□ -1.33
SMPD4-208ENST00000439029 FGF9P31371 208 aaPredicted RBP6.76□□□□□ -1.33
SMPD4-208ENST00000439029 TALDO1P37837 337 aa6.76□□□□□ -1.33
SMPD4-208ENST00000439029 P2RY1P47900 373 aa6.76□□□□□ -1.33
SMPD4-208ENST00000439029 RAB11BQ15907 218 aa6.76□□□□□ -1.33
SMPD4-208ENST00000439029 HSD17B12Q53GQ0 312 aa6.76□□□□□ -1.33
SMPD4-208ENST00000439029 TTC32Q5I0X7 151 aa6.76□□□□□ -1.33
SMPD4-208ENST00000439029 OR1L8Q8NGR8 309 aa6.76□□□□□ -1.33
SMPD4-208ENST00000439029 RNF141Q8WVD5 230 aa6.76□□□□□ -1.33
SMPD4-208ENST00000439029 LSM10Q969L4 123 aaKnown RBP6.76□□□□□ -1.33
SMPD4-208ENST00000439029 PINX1Q96BK5 328 aaKnown RBP6.76□□□□□ -1.33
SMPD4-208ENST00000439029 MOB3AQ96BX8 217 aa6.76□□□□□ -1.33
SMPD4-208ENST00000439029 TMEM80Q96HE8 168 aa6.76□□□□□ -1.33
SMPD4-208ENST00000439029 CCL28Q9NRJ3 127 aa6.76□□□□□ -1.33
SMPD4-208ENST00000439029 LRP1Q07954 4544 aaKnown RBP6.76□□□□□ -1.33
SMPD4-208ENST00000439029 TMEM272A0A1B0GTI8 110 aa6.75□□□□□ -1.33
SMPD4-208ENST00000439029 LOC100130705A0A1B0GUX0 176 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms