RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 RPL23P62829 140 aaKnown RBP2.22□□□□□ -2.05
LINC00407-201ENST00000426509 GNB1P62873 340 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 S100A12P80511 92 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 MRPS11P82912 194 aaKnown RBP2.22□□□□□ -2.05
LINC00407-201ENST00000426509 TNFAIP6P98066 277 aaPredicted RBP2.22□□□□□ -2.05
LINC00407-201ENST00000426509 MEF2BQ02080 365 aaPredicted RBP2.22□□□□□ -2.05
LINC00407-201ENST00000426509 FAM27E3Q08E93 113 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 KIAA0141Q14154 515 aaPredicted RBP2.22□□□□□ -2.05
LINC00407-201ENST00000426509 HIST2H2BEQ16778 126 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 ZNF674Q2M3X9 581 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 ACOT6Q3I5F7 207 aaPredicted RBP2.22□□□□□ -2.05
LINC00407-201ENST00000426509 TMEM30BQ3MIR4 351 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 GAGE13Q4V321 117 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 KIAA2026Q5HYC2 2103 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 GCSAMLQ5JQS6 135 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.22□□□□□ -2.05
LINC00407-201ENST00000426509 NCMAPQ5T1S8 102 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 PRAMEF5Q5TYX0 476 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 MIC13Q5XKP0 118 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 OR4A47Q6IF82 309 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 FAM180AQ6UWF9 173 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 SPNS3Q6ZMD2 512 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 Q6ZSN1 163 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 SLC25A48Q6ZT89 311 aaKnown RBP2.22□□□□□ -2.05
LINC00407-201ENST00000426509 Q71RC1 249 aaPredicted RBP2.22□□□□□ -2.05
LINC00407-201ENST00000426509 SSX9Q7RTT3 188 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 C1orf87Q8N0U7 546 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 VKORC1L1Q8N0U8 176 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 Q8N1X5 172 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 HIST3H2BBQ8N257 126 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 ABHD12Q8N2K0 398 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 FAM216BQ8N7L0 139 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 Q8NA96 180 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 OR13D1Q8NGV5 346 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 OR4A16Q8NH70 328 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 OR4S2Q8NH73 311 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 ABHD5Q8WTS1 349 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 FRZBQ92765 325 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 CORO2AQ92828 525 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 RAB1CQ92928 201 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 HIST1H2BHQ93079 126 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 RPUSD4Q96CM3 377 aaKnown RBP2.22□□□□□ -2.05
LINC00407-201ENST00000426509 SNRNP40Q96DI7 357 aaKnown RBP2.22□□□□□ -2.05
LINC00407-201ENST00000426509 FAM210BQ96KR6 192 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 S1PR3Q99500 378 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 CCL13Q99616 98 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 HIST1H2BNQ99877 126 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 HIST1H2BMQ99879 126 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 SMIM7Q9BQ49 75 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 GGACTQ9BVM4 153 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 ELOVL1Q9BW60 279 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 FAM234AQ9H0X4 552 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 PARLQ9H300 379 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 MANBALQ9NQG1 85 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 TMEM242Q9NWH2 141 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 JKAMPQ9P055 326 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 DOK5Q9P104 306 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 ZNRD1Q9P1U0 126 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 RNF7Q9UBF6 113 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 IL19Q9UHD0 177 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 NAT8Q9UHE5 227 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 FOXA2Q9Y261 457 aaPredicted RBP2.22□□□□□ -2.05
LINC00407-201ENST00000426509 LSM4Q9Y4Z0 139 aaKnown RBP2.22□□□□□ -2.05
LINC00407-201ENST00000426509 URGCP-MRPS24S4R325 110 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 CELSR2Q9HCU4 2923 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 LRBAP50851 2863 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 CACNA1DQ01668 2161 aa2.22□□□□□ -2.05
LINC00407-201ENST00000426509 ICE1Q9Y2F5 2266 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 TRGV10A0A0A0MS01 117 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 SMCO3A2RU48 225 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 SRRM4A7MD48 611 aaKnown RBP2.21□□□□□ -2.06
LINC00407-201ENST00000426509 LINC00587B1AMM8 73 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 C11orf94C9JXX5 98 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 FNDC10F2Z333 226 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 C17orf112F2Z3M2 114 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 F6UZH7 168 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 H7BYZ3 331 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 CYB5BO43169 146 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 TGOLN2O43493 480 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 SOX15O60248 233 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 DSCAMO60469 2012 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 GGCTO75223 188 aaKnown RBP2.21□□□□□ -2.06
LINC00407-201ENST00000426509 MPDU1O75352 247 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 RBMXL2O75526 392 aaKnown RBP2.21□□□□□ -2.06
LINC00407-201ENST00000426509 CA2P00918 260 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 HRASP01112 189 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 IFNA10P01566 189 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 OPN1MWP04001 364 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 AMY1AP04745 511 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 SOD3P08294 240 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 LINC00869P0C866 280 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 TRGC1P0CF51 173 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 STAG3L2P0CL84 134 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 STAG3L3P0CL85 134 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 ARL14EPLP0DKL9 152 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 CT45A6P0DMU7 189 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 CT45A5P0DMU8 189 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 CT45A7P0DMV0 189 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 OPN1MW2P0DN77 364 aa2.21□□□□□ -2.06
LINC00407-201ENST00000426509 OPN1MW3P0DN78 364 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms