RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 SSX7Q7RTT5 188 aa13.52□□□□□ -0.24
CMTM3-202ENST00000424011 OR10P1Q8NGE3 313 aa13.52□□□□□ -0.24
CMTM3-202ENST00000424011 TMEM170AQ8WVE7 144 aa13.52□□□□□ -0.24
CMTM3-202ENST00000424011 TAF15Q92804 592 aaKnown RBP eCLIP13.52□□□□□ -0.24
CMTM3-202ENST00000424011 DNAJC4Q9NNZ3 241 aa13.52□□□□□ -0.24
CMTM3-202ENST00000424011 TMEM140Q9NV12 185 aa13.52□□□□□ -0.24
CMTM3-202ENST00000424011 NAGKQ9UJ70 344 aa13.52□□□□□ -0.24
CMTM3-202ENST00000424011 LOC102723971A0A1B0GUV8 181 aa13.52□□□□□ -0.25
CMTM3-202ENST00000424011 HBE1P02100 147 aa13.52□□□□□ -0.25
CMTM3-202ENST00000424011 CDKN1BP46527 198 aa13.52□□□□□ -0.25
CMTM3-202ENST00000424011 SDF2L1Q9HCN8 221 aa13.52□□□□□ -0.25
CMTM3-202ENST00000424011 TRAV1-1A0A0B4J248 108 aa13.51□□□□□ -0.25
CMTM3-202ENST00000424011 TMEM155Q4W5P6 130 aa13.51□□□□□ -0.25
CMTM3-202ENST00000424011 FAM71F2Q6NXP2 309 aa13.51□□□□□ -0.25
CMTM3-202ENST00000424011 ZNF833PQ6ZTB9 187 aa13.51□□□□□ -0.25
CMTM3-202ENST00000424011 VKORC1L1Q8N0U8 176 aa13.51□□□□□ -0.25
CMTM3-202ENST00000424011 RALYQ9UKM9 306 aaKnown RBP13.51□□□□□ -0.25
CMTM3-202ENST00000424011 CFAP46Q8IYW2 2715 aa13.51□□□□□ -0.25
CMTM3-202ENST00000424011 COL8A2P25067 703 aa13.51□□□□□ -0.25
CMTM3-202ENST00000424011 RAB11AP62491 216 aa13.51□□□□□ -0.25
CMTM3-202ENST00000424011 SERF2P84101 59 aa13.51□□□□□ -0.25
CMTM3-202ENST00000424011 POU2AF1Q16633 256 aa13.51□□□□□ -0.25
CMTM3-202ENST00000424011 GBGT1Q8N5D6 347 aa13.51□□□□□ -0.25
CMTM3-202ENST00000424011 LINC00311Q8N616 119 aa13.51□□□□□ -0.25
CMTM3-202ENST00000424011 ITLN2Q8WWU7 325 aaPredicted RBP13.51□□□□□ -0.25
CMTM3-202ENST00000424011 MIEN1Q9BRT3 115 aa13.51□□□□□ -0.25
CMTM3-202ENST00000424011 TANC2Q9HCD6 1990 aa13.5□□□□□ -0.25
CMTM3-202ENST00000424011 PFN1P07737 140 aaKnown RBP13.5□□□□□ -0.25
CMTM3-202ENST00000424011 CT45A6P0DMU7 189 aa13.5□□□□□ -0.25
CMTM3-202ENST00000424011 CT45A5P0DMU8 189 aa13.5□□□□□ -0.25
CMTM3-202ENST00000424011 CT45A7P0DMV0 189 aa13.5□□□□□ -0.25
CMTM3-202ENST00000424011 GNB2P62879 340 aa13.5□□□□□ -0.25
CMTM3-202ENST00000424011 RELBQ01201 579 aa13.5□□□□□ -0.25
CMTM3-202ENST00000424011 LCN15Q6UWW0 184 aa13.5□□□□□ -0.25
CMTM3-202ENST00000424011 SLC35D1Q9NTN3 355 aa13.5□□□□□ -0.25
CMTM3-202ENST00000424011 OR10X1Q8NGY0 326 aa13.5□□□□□ -0.25
CMTM3-202ENST00000424011 ZNF596Q8TC21 504 aa13.5□□□□□ -0.25
CMTM3-202ENST00000424011 NEU4Q8WWR8 484 aaPredicted RBP13.5□□□□□ -0.25
CMTM3-202ENST00000424011 TMEM186Q96B77 213 aa13.5□□□□□ -0.25
CMTM3-202ENST00000424011 BBC3Q96PG8 261 aaPredicted RBP13.5□□□□□ -0.25
CMTM3-202ENST00000424011 C20orf144Q9BQM9 153 aa13.5□□□□□ -0.25
CMTM3-202ENST00000424011 TMEM147Q9BVK8 224 aa13.5□□□□□ -0.25
CMTM3-202ENST00000424011 DSCAML1Q8TD84 2053 aa13.5□□□□□ -0.25
CMTM3-202ENST00000424011 APOA2P02652 100 aa13.49□□□□□ -0.25
CMTM3-202ENST00000424011 FGF8P55075 233 aaPredicted RBP13.49□□□□□ -0.25
CMTM3-202ENST00000424011 TMEM41BQ5BJD5 291 aa13.49□□□□□ -0.25
CMTM3-202ENST00000424011 ZNF787Q6DD87 383 aa13.49□□□□□ -0.25
CMTM3-202ENST00000424011 C11orf42Q8N5U0 333 aa13.49□□□□□ -0.25
CMTM3-202ENST00000424011 MBD3L1Q8WWY6 194 aa13.49□□□□□ -0.25
CMTM3-202ENST00000424011 DOCK11Q5JSL3 2073 aa13.49□□□□□ -0.25
CMTM3-202ENST00000424011 TRAV3A0A0B4J244 114 aa13.48□□□□□ -0.25
CMTM3-202ENST00000424011 C15orf61A6NNL5 157 aa13.48□□□□□ -0.25
CMTM3-202ENST00000424011 J3QR06 171 aa13.48□□□□□ -0.25
CMTM3-202ENST00000424011 DLX6P56179 175 aa13.48□□□□□ -0.25
CMTM3-202ENST00000424011 FAM3BP58499 235 aaPredicted RBP13.48□□□□□ -0.25
CMTM3-202ENST00000424011 COL5A1-AS1Q5SY13 56 aa13.48□□□□□ -0.25
CMTM3-202ENST00000424011 OR4A47Q6IF82 309 aa13.48□□□□□ -0.25
CMTM3-202ENST00000424011 TIMD4Q96H15 378 aa13.48□□□□□ -0.25
CMTM3-202ENST00000424011 GNG13Q9P2W3 67 aa13.48□□□□□ -0.25
CMTM3-202ENST00000424011 FOXA2Q9Y261 457 aaPredicted RBP13.48□□□□□ -0.25
CMTM3-202ENST00000424011 TIMM9Q9Y5J7 89 aa13.48□□□□□ -0.25
CMTM3-202ENST00000424011 ANKHD1Q8IWZ3 2542 aaKnown RBP13.48□□□□□ -0.25
CMTM3-202ENST00000424011 C15orf62A8K5M9 175 aa13.48□□□□□ -0.25
CMTM3-202ENST00000424011 LYNX1G3V0Z9 82 aa13.48□□□□□ -0.25
CMTM3-202ENST00000424011 IGKV1D-33P01593 117 aa13.48□□□□□ -0.25
CMTM3-202ENST00000424011 IGKV1-33P01594 117 aa13.48□□□□□ -0.25
CMTM3-202ENST00000424011 LYNX1P0DP58 116 aa13.48□□□□□ -0.25
CMTM3-202ENST00000424011 ACOT6Q3I5F7 207 aaPredicted RBP13.48□□□□□ -0.25
CMTM3-202ENST00000424011 WDR25Q64LD2 544 aaPredicted RBP13.48□□□□□ -0.25
CMTM3-202ENST00000424011 LEMD1Q68G75 181 aa13.48□□□□□ -0.25
CMTM3-202ENST00000424011 CENPVQ7Z7K6 275 aaPredicted RBP13.48□□□□□ -0.25
CMTM3-202ENST00000424011 OR9G1Q8NH87 305 aa13.48□□□□□ -0.25
CMTM3-202ENST00000424011 ROS1P08922 2347 aa13.48□□□□□ -0.25
CMTM3-202ENST00000424011 IGHV1-8P0DP01 117 aa13.47□□□□□ -0.25
CMTM3-202ENST00000424011 TMEM241Q24JQ0 296 aa13.47□□□□□ -0.25
CMTM3-202ENST00000424011 ETFRF1Q6IPR1 90 aa13.47□□□□□ -0.25
CMTM3-202ENST00000424011 C11orf71Q6IPW1 123 aa13.47□□□□□ -0.25
CMTM3-202ENST00000424011 ACSM6Q6P461 480 aa13.47□□□□□ -0.25
CMTM3-202ENST00000424011 OSR1Q8TAX0 266 aaPredicted RBP13.47□□□□□ -0.25
CMTM3-202ENST00000424011 RAB1CQ92928 201 aa13.47□□□□□ -0.25
CMTM3-202ENST00000424011 TBX15Q96SF7 602 aa13.47□□□□□ -0.25
CMTM3-202ENST00000424011 HEYLQ9NQ87 328 aaPredicted RBP13.47□□□□□ -0.25
CMTM3-202ENST00000424011 TMEM14BQ9NUH8 114 aa13.47□□□□□ -0.25
CMTM3-202ENST00000424011 PRNDQ9UKY0 176 aa13.47□□□□□ -0.25
CMTM3-202ENST00000424011 IL3RAP26951 378 aa13.47□□□□□ -0.25
CMTM3-202ENST00000424011 ACTL10Q5JWF8 245 aa13.47□□□□□ -0.25
CMTM3-202ENST00000424011 OR8B3Q8NGG8 313 aa13.47□□□□□ -0.25
CMTM3-202ENST00000424011 TMEM37Q8WXS4 190 aa13.47□□□□□ -0.25
CMTM3-202ENST00000424011 TNFRSF14Q92956 283 aa13.47□□□□□ -0.25
CMTM3-202ENST00000424011 OR8B2Q96RD0 313 aa13.47□□□□□ -0.25
CMTM3-202ENST00000424011 ZFP92A6NM28 416 aa13.46□□□□□ -0.25
CMTM3-202ENST00000424011 ZNF705FA8MVS1 300 aaPredicted RBP13.46□□□□□ -0.25
CMTM3-202ENST00000424011 PRB1P04280 392 aa13.46□□□□□ -0.25
CMTM3-202ENST00000424011 ZNF705DP0CH99 300 aaPredicted RBP13.46□□□□□ -0.25
CMTM3-202ENST00000424011 ZNF705BP0CI00 300 aaPredicted RBP13.46□□□□□ -0.25
CMTM3-202ENST00000424011 SELENOTP62341 195 aa13.46□□□□□ -0.25
CMTM3-202ENST00000424011 BATFQ16520 125 aa13.46□□□□□ -0.25
CMTM3-202ENST00000424011 VWC2Q2TAL6 325 aa13.46□□□□□ -0.25
CMTM3-202ENST00000424011 RPP25LQ8N5L8 163 aaKnown RBP13.46□□□□□ -0.25
CMTM3-202ENST00000424011 OR5AN1Q8NGI8 311 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms