RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 CDKN2AP42771 156 aaKnown RBP3.72□□□□□ -1.81
SF3B1-202ENST00000409915 HIST1H3AP68431 136 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 CYCSP99999 105 aaKnown RBP3.72□□□□□ -1.81
SF3B1-202ENST00000409915 GINS1Q14691 196 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 HIST3H3Q16695 136 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 TMEM183BQ1AE95 376 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 PGGHGQ32M88 737 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 C10orf128Q5T292 105 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 SLC25A47Q6Q0C1 308 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 Q6ZSN1 163 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 TMED4Q7Z7H5 227 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 NIT1Q86X76 327 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 SLC22A24Q8N4F4 322 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 LINC00471Q8N535 108 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 FAM71E2Q8N5Q1 922 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 SLC26A10Q8NG04 563 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 OR4B1Q8NGF8 309 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 OR10V1Q8NGI7 309 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 OR6N2Q8NGY6 317 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 OR4K13Q8NH42 304 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 OR4X1Q8NH49 305 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 MRAPQ8TCY5 172 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 TNFAIP8L1Q8WVP5 186 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 RNF133Q8WVZ7 376 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 TMED6Q8WW62 240 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 DLX4Q92988 240 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-202ENST00000409915 NABP1Q96AH0 204 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 SLC25A38Q96DW6 304 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 SFRP2Q96HF1 295 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 C20orf173Q96LM9 149 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 GPX7Q96SL4 187 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-202ENST00000409915 NMNAT3Q96T66 252 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 CCL19Q99731 98 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 NIPSNAP3BQ9BS92 247 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 TMEM204Q9BSN7 226 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 NMES1Q9C002 83 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 RETNQ9HD89 108 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 PLEKHJ1Q9NW61 149 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 COMMD9Q9P000 198 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 MTFP1Q9UDX5 166 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 LAMTOR2Q9Y2Q5 125 aa3.72□□□□□ -1.81
SF3B1-202ENST00000409915 TRBV7-9A0A0J9YWB2 115 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 A0A1W2PRF3 423 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 A0A1W2PRM7 423 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 IFITM5A6NNB3 132 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 TNFRSF13BO14836 293 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-202ENST00000409915 OR7C2O60412 319 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 SLC16A7O60669 478 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 MPZL1O95297 269 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 IGKV3-15P01624 115 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 IGLV1-44P01699 117 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 TYMSP04818 313 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 GYPBP06028 91 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 PGA5P0DJD9 388 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 IGHV4-31P0DP07 118 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 ZNF32P17041 273 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 PYCR1P32322 319 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 RPS27P42677 84 aaKnown RBP3.71□□□□□ -1.82
SF3B1-202ENST00000409915 TFPI2P48307 235 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 RAB31Q13636 194 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 ENDOGQ14249 297 aaKnown RBP3.71□□□□□ -1.82
SF3B1-202ENST00000409915 RPEL1Q2QD12 228 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 ACOT6Q3I5F7 207 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-202ENST00000409915 CEACAM21Q3KPI0 293 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 ZNF672Q499Z4 452 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-202ENST00000409915 LRRC10Q5BKY1 277 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 TPTE2P1Q5T6R2 138 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 AADACL3Q5VUY0 350 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 Q6ZSV7 163 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 ZNF627Q7L945 461 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 NEGR1Q7Z3B1 354 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 S100A7AQ86SG5 101 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 ZNF584Q8IVC4 421 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 TCEANCQ8N8B7 351 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 ZFP41Q8N8Y5 198 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 ZSCAN4Q8NAM6 433 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-202ENST00000409915 OR52E2Q8NGJ4 325 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 PPP1R1CQ8WVI7 109 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 BAALCQ8WXS3 180 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 NKX3-1Q99801 234 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-202ENST00000409915 GINS3Q9BRX5 216 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 RNF126Q9BV68 326 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 BET1LQ9NYM9 111 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 DNAJC27Q9NZQ0 273 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 UQCR10Q9UDW1 63 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 C14orf166Q9Y224 244 aaKnown RBP3.71□□□□□ -1.82
SF3B1-202ENST00000409915 MRPS28Q9Y2Q9 187 aaKnown RBP3.71□□□□□ -1.82
SF3B1-202ENST00000409915 POLR1DQ9Y2S0 133 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 OR2W1Q9Y3N9 320 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 OR51B2Q9Y5P1 312 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 ZNF469Q96JG9 3925 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-202ENST00000409915 CREBBPQ92793 2442 aa3.71□□□□□ -1.82
SF3B1-202ENST00000409915 RAI1Q7Z5J4 1906 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-202ENST00000409915 USF3Q68DE3 2245 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 PLCE1Q9P212 2302 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 IGLV1-36A0A0B4J1U3 117 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 TMEM189A5PLL7 270 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 GAGE12JA6NER3 117 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 SNURFLB1AK76 121 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms