RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 MARCH1Q8TCQ1 289 aa13.34□□□□□ -0.27
LSM5-204ENST00000409909 SCARB1Q8WTV0 552 aa13.34□□□□□ -0.27
LSM5-204ENST00000409909 SMIM4Q8WVI0 70 aa13.34□□□□□ -0.27
LSM5-204ENST00000409909 WDR89Q96FK6 387 aaPredicted RBP13.34□□□□□ -0.27
LSM5-204ENST00000409909 DIRAS2Q96HU8 199 aa13.34□□□□□ -0.27
LSM5-204ENST00000409909 TMEM56Q96MV1 263 aa13.34□□□□□ -0.27
LSM5-204ENST00000409909 MLXQ9UH92 298 aa13.34□□□□□ -0.27
LSM5-204ENST00000409909 RYR3Q15413 4870 aa13.33□□□□□ -0.28
LSM5-204ENST00000409909 C3orf85A0A1B0GTC6 90 aa13.33□□□□□ -0.28
LSM5-204ENST00000409909 OR2T8A6NH00 312 aa13.33□□□□□ -0.28
LSM5-204ENST00000409909 F8W735 103 aaPredicted RBP13.33□□□□□ -0.28
LSM5-204ENST00000409909 H3BMQ9 156 aa13.33□□□□□ -0.28
LSM5-204ENST00000409909 K7EIM0 57 aa13.33□□□□□ -0.28
LSM5-204ENST00000409909 TGOLN2O43493 480 aa13.33□□□□□ -0.28
LSM5-204ENST00000409909 CD7P09564 240 aa13.33□□□□□ -0.28
LSM5-204ENST00000409909 P0C879 139 aa13.33□□□□□ -0.28
LSM5-204ENST00000409909 CD81P60033 236 aa13.33□□□□□ -0.28
LSM5-204ENST00000409909 MRPS10P82664 201 aaKnown RBP13.33□□□□□ -0.28
LSM5-204ENST00000409909 SSBP1Q04837 148 aaKnown RBP13.33□□□□□ -0.28
LSM5-204ENST00000409909 SP6Q3SY56 376 aa13.33□□□□□ -0.28
LSM5-204ENST00000409909 UXS1Q8NBZ7 420 aa13.33□□□□□ -0.28
LSM5-204ENST00000409909 ZFAND1Q8TCF1 268 aa13.33□□□□□ -0.28
LSM5-204ENST00000409909 ZNF436Q9C0F3 470 aaPredicted RBP13.33□□□□□ -0.28
LSM5-204ENST00000409909 SLIRPQ9GZT3 109 aaKnown RBP13.33□□□□□ -0.28
LSM5-204ENST00000409909 ZMAT4Q9H898 229 aa13.33□□□□□ -0.28
LSM5-204ENST00000409909 CTDSPLO15194 276 aa13.32□□□□□ -0.28
LSM5-204ENST00000409909 C8orf88P0DMB2 117 aa13.32□□□□□ -0.28
LSM5-204ENST00000409909 HSPE1P61604 102 aaKnown RBP13.32□□□□□ -0.28
LSM5-204ENST00000409909 PRCDQ00LT1 54 aa13.32□□□□□ -0.28
LSM5-204ENST00000409909 IL18Q14116 193 aa13.32□□□□□ -0.28
LSM5-204ENST00000409909 GUCA2BQ16661 112 aa13.32□□□□□ -0.28
LSM5-204ENST00000409909 HAGHQ16775 308 aa13.32□□□□□ -0.28
LSM5-204ENST00000409909 TMEM61Q8N0U2 210 aa13.32□□□□□ -0.28
LSM5-204ENST00000409909 OR2C3Q8N628 320 aa13.32□□□□□ -0.28
LSM5-204ENST00000409909 OR1P1Q8NH06 330 aa13.32□□□□□ -0.28
LSM5-204ENST00000409909 ISOC1Q96CN7 298 aa13.32□□□□□ -0.28
LSM5-204ENST00000409909 NEURL2Q9BR09 285 aa13.32□□□□□ -0.28
LSM5-204ENST00000409909 CHRDL1Q9BU40 450 aa13.32□□□□□ -0.28
LSM5-204ENST00000409909 TUBA4BQ9H853 241 aa13.32□□□□□ -0.28
LSM5-204ENST00000409909 PLEKHA3Q9HB20 300 aa13.32□□□□□ -0.28
LSM5-204ENST00000409909 C21orf62Q9NYP8 219 aa13.32□□□□□ -0.28
LSM5-204ENST00000409909 A0A0B4J293 547 aa13.31□□□□□ -0.28
LSM5-204ENST00000409909 CTSDP07339 412 aaPredicted RBP13.31□□□□□ -0.28
LSM5-204ENST00000409909 ADMP35318 185 aa13.31□□□□□ -0.28
LSM5-204ENST00000409909 ZNF57Q68EA5 555 aaPredicted RBP13.31□□□□□ -0.28
LSM5-204ENST00000409909 OR1L6Q8NGR2 347 aa13.31□□□□□ -0.28
LSM5-204ENST00000409909 BSCL2Q96G97 398 aaPredicted RBP13.31□□□□□ -0.28
LSM5-204ENST00000409909 RTBDNQ9BSG5 229 aaPredicted RBP13.31□□□□□ -0.28
LSM5-204ENST00000409909 C6orf62Q9GZU0 229 aaPredicted RBP13.31□□□□□ -0.28
LSM5-204ENST00000409909 WFDC10AQ9H1F0 79 aa13.31□□□□□ -0.28
LSM5-204ENST00000409909 COPZ2Q9P299 210 aa13.31□□□□□ -0.28
LSM5-204ENST00000409909 I3L2K1 104 aa13.3□□□□□ -0.28
LSM5-204ENST00000409909 MEF2DQ14814 521 aa13.3□□□□□ -0.28
LSM5-204ENST00000409909 SPINK9Q5DT21 86 aa13.3□□□□□ -0.28
LSM5-204ENST00000409909 BTNL8Q6UX41 500 aa13.3□□□□□ -0.28
LSM5-204ENST00000409909 LINC00322Q6ZN03 302 aaPredicted RBP13.3□□□□□ -0.28
LSM5-204ENST00000409909 DEFB125Q8N687 156 aa13.3□□□□□ -0.28
LSM5-204ENST00000409909 ZNF114Q8NC26 417 aa13.3□□□□□ -0.28
LSM5-204ENST00000409909 OR4C16Q8NGL9 310 aa13.3□□□□□ -0.28
LSM5-204ENST00000409909 TMEM190Q8WZ59 177 aa13.3□□□□□ -0.28
LSM5-204ENST00000409909 ZNF414Q96IQ9 312 aa13.3□□□□□ -0.28
LSM5-204ENST00000409909 ATP6V0BQ99437 205 aa13.3□□□□□ -0.28
LSM5-204ENST00000409909 SOSTQ9BQB4 213 aa13.3□□□□□ -0.28
LSM5-204ENST00000409909 PALMDQ9NP74 551 aa13.3□□□□□ -0.28
LSM5-204ENST00000409909 SLC2A8Q9NY64 477 aa13.3□□□□□ -0.28
LSM5-204ENST00000409909 UFC1Q9Y3C8 167 aa13.3□□□□□ -0.28
LSM5-204ENST00000409909 CEPT1Q9Y6K0 416 aa13.3□□□□□ -0.28
LSM5-204ENST00000409909 CTSGP08311 255 aa13.29□□□□□ -0.28
LSM5-204ENST00000409909 UCP1P25874 307 aa13.29□□□□□ -0.28
LSM5-204ENST00000409909 TNFSF8P32971 234 aa13.29□□□□□ -0.28
LSM5-204ENST00000409909 ELLP55199 621 aaPredicted RBP13.29□□□□□ -0.28
LSM5-204ENST00000409909 SPSB3Q6PJ21 355 aa13.29□□□□□ -0.28
LSM5-204ENST00000409909 CCDC71LQ8N9Z2 235 aa13.29□□□□□ -0.28
LSM5-204ENST00000409909 UBAC2Q8NBM4 344 aa13.29□□□□□ -0.28
LSM5-204ENST00000409909 MARC2Q969Z3 335 aa13.29□□□□□ -0.28
LSM5-204ENST00000409909 MISP3Q96FF7 219 aa13.29□□□□□ -0.28
LSM5-204ENST00000409909 NXF2Q9GZY0 626 aaKnown RBP13.29□□□□□ -0.28
LSM5-204ENST00000409909 MRPL27Q9P0M9 148 aaKnown RBP13.29□□□□□ -0.28
LSM5-204ENST00000409909 RABL2AQ9UBK7 228 aaPredicted RBP13.29□□□□□ -0.28
LSM5-204ENST00000409909 RABL2BQ9UNT1 228 aa13.29□□□□□ -0.28
LSM5-204ENST00000409909 A0A0G2JRQ6 117 aa13.28□□□□□ -0.28
LSM5-204ENST00000409909 DISC1C4P0D8 188 aa13.28□□□□□ -0.28
LSM5-204ENST00000409909 ST8SIA3O43173 380 aa13.28□□□□□ -0.28
LSM5-204ENST00000409909 GSTZ1O43708 216 aaPredicted RBP13.28□□□□□ -0.28
LSM5-204ENST00000409909 NOL3O60936 208 aaKnown RBP13.28□□□□□ -0.28
LSM5-204ENST00000409909 SCAF4O95104 1147 aaKnown RBP13.28□□□□□ -0.28
LSM5-204ENST00000409909 AKAIN1P0CW23 69 aa13.28□□□□□ -0.28
LSM5-204ENST00000409909 AKR1C2P52895 323 aa13.28□□□□□ -0.28
LSM5-204ENST00000409909 TRIM16LQ309B1 348 aa13.28□□□□□ -0.28
LSM5-204ENST00000409909 Q56UQ5 140 aa13.28□□□□□ -0.28
LSM5-204ENST00000409909 C5orf66Q9H5L9 145 aa13.28□□□□□ -0.28
LSM5-204ENST00000409909 IGHV3OR16-8A0A075B7F1 116 aa13.27□□□□□ -0.29
LSM5-204ENST00000409909 ANKRD20A5PA0PJZ0 165 aa13.27□□□□□ -0.29
LSM5-204ENST00000409909 RBMY1BA6NDE4 496 aaKnown RBP13.27□□□□□ -0.29
LSM5-204ENST00000409909 RBMY1EA6NEQ0 496 aaKnown RBP13.27□□□□□ -0.29
LSM5-204ENST00000409909 OR11H12B2RN74 326 aa13.27□□□□□ -0.29
LSM5-204ENST00000409909 NDUFA4O00483 81 aa13.27□□□□□ -0.29
LSM5-204ENST00000409909 IGHV3-48P01763 117 aa13.27□□□□□ -0.29
LSM5-204ENST00000409909 RBMY1DP0C7P1 496 aaKnown RBP13.27□□□□□ -0.29
LSM5-204ENST00000409909 ERHP84090 104 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms