RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 IGHV1-46P01743 117 aa13.71□□□□□ -0.21
PTPRN2-205ENST00000409483 SMIM17P0DL12 118 aa13.71□□□□□ -0.21
PTPRN2-205ENST00000409483 ADCYAP1P18509 176 aa13.71□□□□□ -0.21
PTPRN2-205ENST00000409483 PTTG1IPP53801 180 aa13.71□□□□□ -0.21
PTPRN2-205ENST00000409483 CCDC144NLQ6NUI1 221 aa13.71□□□□□ -0.21
PTPRN2-205ENST00000409483 UNQ5815/PRO19632Q6UWF5 114 aa13.71□□□□□ -0.21
PTPRN2-205ENST00000409483 IFI27L2Q9H2X8 130 aa13.71□□□□□ -0.21
PTPRN2-205ENST00000409483 COL4A3Q01955 1670 aa13.71□□□□□ -0.21
PTPRN2-205ENST00000409483 C9JQL5 133 aa13.71□□□□□ -0.22
PTPRN2-205ENST00000409483 UCNP55089 124 aa13.71□□□□□ -0.22
PTPRN2-205ENST00000409483 GOLT1AQ6ZVE7 132 aa13.71□□□□□ -0.22
PTPRN2-205ENST00000409483 ATOH7Q8N100 152 aa13.71□□□□□ -0.22
PTPRN2-205ENST00000409483 OR8A1Q8NGG7 326 aa13.71□□□□□ -0.22
PTPRN2-205ENST00000409483 NEU1Q99519 415 aa13.71□□□□□ -0.22
PTPRN2-205ENST00000409483 SNRNP40Q96DI7 357 aaKnown RBP13.71□□□□□ -0.22
PTPRN2-205ENST00000409483 RABAC1Q9UI14 185 aa13.71□□□□□ -0.22
PTPRN2-205ENST00000409483 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.7□□□□□ -0.22
PTPRN2-205ENST00000409483 ISLRO14498 428 aa13.7□□□□□ -0.22
PTPRN2-205ENST00000409483 PKIAP61925 76 aa13.7□□□□□ -0.22
PTPRN2-205ENST00000409483 RPL23P62829 140 aaKnown RBP13.7□□□□□ -0.22
PTPRN2-205ENST00000409483 LINC00473A8K010 186 aa13.7□□□□□ -0.22
PTPRN2-205ENST00000409483 B9A039 149 aa13.7□□□□□ -0.22
PTPRN2-205ENST00000409483 PRSS1P07477 247 aa13.7□□□□□ -0.22
PTPRN2-205ENST00000409483 FOXA3P55318 350 aaPredicted RBP13.7□□□□□ -0.22
PTPRN2-205ENST00000409483 KIR3DL3Q8N743 410 aa13.7□□□□□ -0.22
PTPRN2-205ENST00000409483 C2orf16Q68DN1 1984 aa13.7□□□□□ -0.22
PTPRN2-205ENST00000409483 LOC105371242A0A075B767 164 aa13.7□□□□□ -0.22
PTPRN2-205ENST00000409483 M0R143 59 aa13.7□□□□□ -0.22
PTPRN2-205ENST00000409483 IL4P05112 153 aa13.7□□□□□ -0.22
PTPRN2-205ENST00000409483 LY6EQ16553 131 aa13.7□□□□□ -0.22
PTPRN2-205ENST00000409483 LEMD1Q68G75 181 aa13.7□□□□□ -0.22
PTPRN2-205ENST00000409483 COQ2Q96H96 371 aa13.7□□□□□ -0.22
PTPRN2-205ENST00000409483 TXNDC17Q9BRA2 123 aa13.7□□□□□ -0.22
PTPRN2-205ENST00000409483 MUC21A0A0G2JKD1 596 aa13.69□□□□□ -0.22
PTPRN2-205ENST00000409483 MUC21A0A140T8X8 626 aa13.69□□□□□ -0.22
PTPRN2-205ENST00000409483 A8MWL6 223 aa13.69□□□□□ -0.22
PTPRN2-205ENST00000409483 SRRM5B3KS81 715 aa13.69□□□□□ -0.22
PTPRN2-205ENST00000409483 LIPFP07098 398 aa13.69□□□□□ -0.22
PTPRN2-205ENST00000409483 TFPI2P48307 235 aa13.69□□□□□ -0.22
PTPRN2-205ENST00000409483 MUC21Q5SSG8 566 aa13.69□□□□□ -0.22
PTPRN2-205ENST00000409483 Q6P435 159 aa13.69□□□□□ -0.22
PTPRN2-205ENST00000409483 TCF23Q7RTU1 214 aa13.69□□□□□ -0.22
PTPRN2-205ENST00000409483 BPIFA4PQ86YQ2 179 aa13.69□□□□□ -0.22
PTPRN2-205ENST00000409483 RPP25LQ8N5L8 163 aaKnown RBP13.69□□□□□ -0.22
PTPRN2-205ENST00000409483 M0QZ24 198 aa13.69□□□□□ -0.22
PTPRN2-205ENST00000409483 YPEL1O60688 119 aa13.69□□□□□ -0.22
PTPRN2-205ENST00000409483 RNF224P0DH78 156 aa13.69□□□□□ -0.22
PTPRN2-205ENST00000409483 YPEL2Q96QA6 119 aa13.69□□□□□ -0.22
PTPRN2-205ENST00000409483 PPOXP50336 477 aa13.69□□□□□ -0.22
PTPRN2-205ENST00000409483 OSR1Q8TAX0 266 aaPredicted RBP13.69□□□□□ -0.22
PTPRN2-205ENST00000409483 TCAPO15273 167 aa13.69□□□□□ -0.22
PTPRN2-205ENST00000409483 ELOVL5Q9NYP7 299 aa13.69□□□□□ -0.22
PTPRN2-205ENST00000409483 HSPB7Q9UBY9 170 aa13.69□□□□□ -0.22
PTPRN2-205ENST00000409483 LCN2P80188 198 aa13.68□□□□□ -0.22
PTPRN2-205ENST00000409483 SSX8Q7RTT4 187 aa13.68□□□□□ -0.22
PTPRN2-205ENST00000409483 CDKN1AP38936 164 aa13.68□□□□□ -0.22
PTPRN2-205ENST00000409483 RIGQ13278 110 aa13.68□□□□□ -0.22
PTPRN2-205ENST00000409483 PRR31Q5SQ13 230 aa13.68□□□□□ -0.22
PTPRN2-205ENST00000409483 PLSCR4Q9NRQ2 329 aa13.68□□□□□ -0.22
PTPRN2-205ENST00000409483 RAXQ9Y2V3 346 aa13.68□□□□□ -0.22
PTPRN2-205ENST00000409483 WDR31Q8NA23 367 aa13.68□□□□□ -0.22
PTPRN2-205ENST00000409483 ZNRD1Q9P1U0 126 aa13.68□□□□□ -0.22
PTPRN2-205ENST00000409483 IGHV3-66A0A0C4DH42 116 aa13.68□□□□□ -0.22
PTPRN2-205ENST00000409483 SRSF12Q8WXF0 261 aaKnown RBP13.68□□□□□ -0.22
PTPRN2-205ENST00000409483 LINC00312Q9Y6C7 94 aa13.68□□□□□ -0.22
PTPRN2-205ENST00000409483 AUP1Q9Y679 476 aa13.67□□□□□ -0.22
PTPRN2-205ENST00000409483 COLCA2A8K830 154 aa13.67□□□□□ -0.22
PTPRN2-205ENST00000409483 CFPP27918 469 aa13.67□□□□□ -0.22
PTPRN2-205ENST00000409483 PF4V1P10720 104 aa13.67□□□□□ -0.22
PTPRN2-205ENST00000409483 COX19Q49B96 90 aa13.67□□□□□ -0.22
PTPRN2-205ENST00000409483 RNF24Q9Y225 148 aa13.67□□□□□ -0.22
PTPRN2-205ENST00000409483 CSPG4Q6UVK1 2322 aa13.67□□□□□ -0.22
PTPRN2-205ENST00000409483 ANKHD1Q8IWZ3 2542 aaKnown RBP13.67□□□□□ -0.22
PTPRN2-205ENST00000409483 RNASE7Q9H1E1 156 aaKnown RBP13.66□□□□□ -0.22
PTPRN2-205ENST00000409483 SLC25A15Q9Y619 301 aa13.66□□□□□ -0.22
PTPRN2-205ENST00000409483 ARFGEF3Q5TH69 2177 aa13.66□□□□□ -0.22
PTPRN2-205ENST00000409483 PCNX3Q9H6A9 2034 aa13.66□□□□□ -0.22
PTPRN2-205ENST00000409483 ZNF207O43670 478 aaKnown RBP13.66□□□□□ -0.22
PTPRN2-205ENST00000409483 TMEM50AO95807 157 aa13.66□□□□□ -0.22
PTPRN2-205ENST00000409483 IGKV1D-33P01593 117 aa13.66□□□□□ -0.22
PTPRN2-205ENST00000409483 IGKV1-33P01594 117 aa13.66□□□□□ -0.22
PTPRN2-205ENST00000409483 CXCL1P09341 107 aa13.66□□□□□ -0.22
PTPRN2-205ENST00000409483 PYYP10082 97 aa13.66□□□□□ -0.22
PTPRN2-205ENST00000409483 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.66□□□□□ -0.22
PTPRN2-205ENST00000409483 C15orf61A6NNL5 157 aa13.66□□□□□ -0.22
PTPRN2-205ENST00000409483 CORTO00230 105 aa13.66□□□□□ -0.22
PTPRN2-205ENST00000409483 RBFOX2O43251 390 aaKnown RBP eCLIP13.66□□□□□ -0.224e-7■■■■■ 99.9
PTPRN2-205ENST00000409483 NBEAP1P0C6P0 100 aa13.66□□□□□ -0.22
PTPRN2-205ENST00000409483 GRAMD2BQ96HH9 432 aa13.66□□□□□ -0.22
PTPRN2-205ENST00000409483 GFI1BQ5VTD9 330 aa13.66□□□□□ -0.22
PTPRN2-205ENST00000409483 SPACA3Q8IXA5 215 aa13.66□□□□□ -0.22
PTPRN2-205ENST00000409483 FOXA2Q9Y261 457 aaPredicted RBP13.66□□□□□ -0.22
PTPRN2-205ENST00000409483 FAM106CPP0CH98 169 aa13.65□□□□□ -0.22
PTPRN2-205ENST00000409483 ZNF474Q6S9Z5 364 aaPredicted RBP13.65□□□□□ -0.22
PTPRN2-205ENST00000409483 COLCA1Q6ZS62 124 aa13.65□□□□□ -0.22
PTPRN2-205ENST00000409483 CBLN4Q9NTU7 201 aa13.65□□□□□ -0.22
PTPRN2-205ENST00000409483 LY6HO94772 140 aa13.65□□□□□ -0.22
PTPRN2-205ENST00000409483 SRSF4Q08170 494 aaKnown RBP13.65□□□□□ -0.22
PTPRN2-205ENST00000409483 DERL1Q9BUN8 251 aa13.65□□□□□ -0.22
PTPRN2-205ENST00000409483 UPK2O00526 184 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms