RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 RHPN1-AS1Q9BWJ2 59 aa6.81□□□□□ -1.32
NEDD9-203ENST00000397378 COMMD5Q9GZQ3 224 aa6.81□□□□□ -1.32
NEDD9-203ENST00000397378 HRASLSQ9HDD0 168 aa6.81□□□□□ -1.32
NEDD9-203ENST00000397378 C8orf4Q9NR00 106 aa6.81□□□□□ -1.32
NEDD9-203ENST00000397378 C21orf62Q9NYP8 219 aa6.81□□□□□ -1.32
NEDD9-203ENST00000397378 TAS2R8Q9NYW2 309 aa6.81□□□□□ -1.32
NEDD9-203ENST00000397378 NACAE9PAV3 2078 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 A0A075B6Q4 140 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 IGHV4-28A0A0C4DH34 117 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 IGHV7-4-1A0A0J9YVY3 117 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 F8W735 103 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-203ENST00000397378 UPK2O00526 184 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 IFNA21P01568 189 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 IFNA17P01571 189 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 CD5P06127 495 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 SERPINE2P07093 398 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 GNAO1P09471 354 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 MIFP14174 115 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 RAB6AP20340 208 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 TFPI2P48307 235 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 TAS2R31P59538 309 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 ARL6IP1Q15041 203 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 TMEM41BQ5BJD5 291 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 HES5Q5TA89 166 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 LIPKQ5VXJ0 399 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 SLC25A24Q6NUK1 477 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 HSD17B13Q7Z5P4 300 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-203ENST00000397378 PACRGLQ8N7B6 248 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 TMEM116Q8NCL8 245 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 OR10W1Q8NGF6 305 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 SCARB1Q8WTV0 552 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 UFD1Q92890 307 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 ZNF414Q96IQ9 312 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 OR10C1Q96KK4 312 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 CMTM3Q96MX0 182 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 QTRT1Q9BXR0 403 aaKnown RBP6.8□□□□□ -1.32
NEDD9-203ENST00000397378 DCSTAMPQ9H295 470 aa6.8□□□□□ -1.32
NEDD9-203ENST00000397378 TRAV3A0A0B4J244 114 aa6.79□□□□□ -1.32
NEDD9-203ENST00000397378 METTL21EPA6NDL7 271 aa6.79□□□□□ -1.32
NEDD9-203ENST00000397378 ZNF705EA8MWA4 302 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-203ENST00000397378 DFFBO76075 338 aa6.79□□□□□ -1.32
NEDD9-203ENST00000397378 CTSGP08311 255 aa6.79□□□□□ -1.32
NEDD9-203ENST00000397378 OR13C7P0DN81 318 aa6.79□□□□□ -1.32
NEDD9-203ENST00000397378 PSMA1P25786 263 aaKnown RBP6.79□□□□□ -1.32
NEDD9-203ENST00000397378 PAFAH1B2P68402 229 aa6.79□□□□□ -1.32
NEDD9-203ENST00000397378 WT1-ASQ06250 92 aa6.79□□□□□ -1.32
NEDD9-203ENST00000397378 MSMO1Q15800 293 aa6.79□□□□□ -1.32
NEDD9-203ENST00000397378 CNIH2Q6PI25 160 aa6.79□□□□□ -1.32
NEDD9-203ENST00000397378 ZNF600Q6ZNG1 722 aa6.79□□□□□ -1.32
NEDD9-203ENST00000397378 SPAG16Q8N0X2 631 aa6.79□□□□□ -1.32
NEDD9-203ENST00000397378 DGCR14Q96DF8 476 aaKnown RBP6.79□□□□□ -1.32
NEDD9-203ENST00000397378 GPHA2Q96T91 129 aa6.79□□□□□ -1.32
NEDD9-203ENST00000397378 NDUFAF3Q9BU61 184 aa6.79□□□□□ -1.32
NEDD9-203ENST00000397378 ELF5Q9UKW6 265 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-203ENST00000397378 F11RQ9Y624 299 aaKnown RBP6.79□□□□□ -1.32
NEDD9-203ENST00000397378 MYCBP2O75592 4640 aa6.78□□□□□ -1.32
NEDD9-203ENST00000397378 IGKV3-7A0A075B6H7 116 aa6.78□□□□□ -1.32
NEDD9-203ENST00000397378 ELOA3CA0A087WX78 387 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-203ENST00000397378 DEFB131BA0A096LNP1 70 aa6.78□□□□□ -1.32
NEDD9-203ENST00000397378 TRAV2A0A0B4J234 112 aa6.78□□□□□ -1.32
NEDD9-203ENST00000397378 K7EIM0 57 aa6.78□□□□□ -1.32
NEDD9-203ENST00000397378 PFDN1O60925 122 aa6.78□□□□□ -1.32
NEDD9-203ENST00000397378 HPRT1P00492 218 aa6.78□□□□□ -1.32
NEDD9-203ENST00000397378 GIG44P09565 113 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-203ENST00000397378 TRAPPC2P0DI81 140 aa6.78□□□□□ -1.32
NEDD9-203ENST00000397378 TRAPPC2BP0DI82 140 aa6.78□□□□□ -1.32
NEDD9-203ENST00000397378 NQO2P16083 231 aa6.78□□□□□ -1.32
NEDD9-203ENST00000397378 M6PRP20645 277 aa6.78□□□□□ -1.32
NEDD9-203ENST00000397378 SSTP61278 116 aa6.78□□□□□ -1.32
NEDD9-203ENST00000397378 RPS25P62851 125 aaKnown RBP6.78□□□□□ -1.32
NEDD9-203ENST00000397378 MZT2BQ6NZ67 158 aa6.78□□□□□ -1.32
NEDD9-203ENST00000397378 SPATA12Q7Z6I5 190 aa6.78□□□□□ -1.32
NEDD9-203ENST00000397378 GBGT1Q8N5D6 347 aa6.78□□□□□ -1.32
NEDD9-203ENST00000397378 ZBTB34Q8NCN2 500 aa6.78□□□□□ -1.32
NEDD9-203ENST00000397378 IGHV3-49A0A0A0MS15 119 aa6.77□□□□□ -1.33
NEDD9-203ENST00000397378 TRAV14DV4A0A0A6YYC5 116 aa6.77□□□□□ -1.33
NEDD9-203ENST00000397378 IGHV3-21A0A0B4J1V1 117 aa6.77□□□□□ -1.33
NEDD9-203ENST00000397378 IFITM5A6NNB3 132 aa6.77□□□□□ -1.33
NEDD9-203ENST00000397378 NUPL2O15504 423 aaKnown RBP6.77□□□□□ -1.33
NEDD9-203ENST00000397378 SPP1P10451 314 aa6.77□□□□□ -1.33
NEDD9-203ENST00000397378 DEFB131AP59861 70 aa6.77□□□□□ -1.33
NEDD9-203ENST00000397378 FABP5Q01469 135 aa6.77□□□□□ -1.33
NEDD9-203ENST00000397378 CATR1Q13166 79 aa6.77□□□□□ -1.33
NEDD9-203ENST00000397378 CDNFQ49AH0 187 aa6.77□□□□□ -1.33
NEDD9-203ENST00000397378 Q56UQ5 140 aa6.77□□□□□ -1.33
NEDD9-203ENST00000397378 Q5VSD8 79 aa6.77□□□□□ -1.33
NEDD9-203ENST00000397378 HACD4Q5VWC8 232 aa6.77□□□□□ -1.33
NEDD9-203ENST00000397378 LEMD1Q68G75 181 aa6.77□□□□□ -1.33
NEDD9-203ENST00000397378 MORN3Q6PF18 240 aaPredicted RBP6.77□□□□□ -1.33
NEDD9-203ENST00000397378 ZNF773Q6PK81 442 aa6.77□□□□□ -1.33
NEDD9-203ENST00000397378 TCF24Q7RTU0 167 aa6.77□□□□□ -1.33
NEDD9-203ENST00000397378 STHQ8IWL8 128 aa6.77□□□□□ -1.33
NEDD9-203ENST00000397378 UBAC2Q8NBM4 344 aa6.77□□□□□ -1.33
NEDD9-203ENST00000397378 OR1L8Q8NGR8 309 aa6.77□□□□□ -1.33
NEDD9-203ENST00000397378 PLEKHA2Q9HB19 425 aa6.77□□□□□ -1.33
NEDD9-203ENST00000397378 CCL28Q9NRJ3 127 aa6.77□□□□□ -1.33
NEDD9-203ENST00000397378 NDUFA4L2Q9NRX3 87 aa6.77□□□□□ -1.33
NEDD9-203ENST00000397378 TMEM140Q9NV12 185 aa6.77□□□□□ -1.33
NEDD9-203ENST00000397378 ANXA10Q9UJ72 324 aa6.77□□□□□ -1.33
NEDD9-203ENST00000397378 X6R8D5 127 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms