RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 CCDC71LQ8N9Z2 235 aa10.38□□□□□ -0.75
CXCL12-205ENST00000395794 TMEM229BQ8NBD8 167 aa10.38□□□□□ -0.75
CXCL12-205ENST00000395794 UBAC2Q8NBM4 344 aa10.38□□□□□ -0.75
CXCL12-205ENST00000395794 MUC7Q8TAX7 377 aa10.38□□□□□ -0.75
CXCL12-205ENST00000395794 RAB2BQ8WUD1 216 aa10.38□□□□□ -0.75
CXCL12-205ENST00000395794 CACNG8Q8WXS5 425 aa10.38□□□□□ -0.75
CXCL12-205ENST00000395794 MRGPRFQ96AM1 343 aa10.38□□□□□ -0.75
CXCL12-205ENST00000395794 WDR89Q96FK6 387 aaPredicted RBP10.38□□□□□ -0.75
CXCL12-205ENST00000395794 BSCL2Q96G97 398 aaPredicted RBP10.38□□□□□ -0.75
CXCL12-205ENST00000395794 SEC22AQ96IW7 307 aa10.38□□□□□ -0.75
CXCL12-205ENST00000395794 ATP6V0BQ99437 205 aa10.38□□□□□ -0.75
CXCL12-205ENST00000395794 PLEKHA3Q9HB20 300 aa10.38□□□□□ -0.75
CXCL12-205ENST00000395794 GAR1Q9NY12 217 aaKnown RBP10.38□□□□□ -0.75
CXCL12-205ENST00000395794 COPZ2Q9P299 210 aa10.38□□□□□ -0.75
CXCL12-205ENST00000395794 IGHV3-35A0A0C4DH35 117 aa10.37□□□□□ -0.75
CXCL12-205ENST00000395794 OR11H12B2RN74 326 aa10.37□□□□□ -0.75
CXCL12-205ENST00000395794 RAB3DO95716 219 aa10.37□□□□□ -0.75
CXCL12-205ENST00000395794 PI3P19957 117 aa10.37□□□□□ -0.75
CXCL12-205ENST00000395794 EDN2P20800 178 aa10.37□□□□□ -0.75
CXCL12-205ENST00000395794 PPP5CP53041 499 aa10.37□□□□□ -0.75
CXCL12-205ENST00000395794 ERHP84090 104 aaKnown RBP10.37□□□□□ -0.75
CXCL12-205ENST00000395794 SSBP1Q04837 148 aaKnown RBP10.37□□□□□ -0.75
CXCL12-205ENST00000395794 TM4SF20Q53R12 229 aa10.37□□□□□ -0.75
CXCL12-205ENST00000395794 Q56UQ5 140 aa10.37□□□□□ -0.75
CXCL12-205ENST00000395794 UNQ9165/PRO28630Q6UXU0 137 aa10.37□□□□□ -0.75
CXCL12-205ENST00000395794 OR52B4Q8NGK2 314 aa10.37□□□□□ -0.75
CXCL12-205ENST00000395794 OR1P1Q8NH06 330 aa10.37□□□□□ -0.75
CXCL12-205ENST00000395794 TERB2Q8NHR7 220 aa10.37□□□□□ -0.75
CXCL12-205ENST00000395794 SCARB1Q8WTV0 552 aa10.37□□□□□ -0.75
CXCL12-205ENST00000395794 MRPL27Q9P0M9 148 aaKnown RBP10.37□□□□□ -0.75
CXCL12-205ENST00000395794 RABL2AQ9UBK7 228 aaPredicted RBP10.37□□□□□ -0.75
CXCL12-205ENST00000395794 RABL2BQ9UNT1 228 aa10.37□□□□□ -0.75
CXCL12-205ENST00000395794 IGHV3-21A0A0B4J1V1 117 aa10.36□□□□□ -0.75
CXCL12-205ENST00000395794 C3orf85A0A1B0GTC6 90 aa10.36□□□□□ -0.75
CXCL12-205ENST00000395794 DBX1A6NMT0 343 aa10.36□□□□□ -0.75
CXCL12-205ENST00000395794 CD7P09564 240 aa10.36□□□□□ -0.75
CXCL12-205ENST00000395794 LYL1P12980 280 aa10.36□□□□□ -0.75
CXCL12-205ENST00000395794 SMCPP49901 116 aaPredicted RBP10.36□□□□□ -0.75
CXCL12-205ENST00000395794 AKR1C2P52895 323 aa10.36□□□□□ -0.75
CXCL12-205ENST00000395794 TMBIM6P55061 237 aa10.36□□□□□ -0.75
CXCL12-205ENST00000395794 HSPE1P61604 102 aaKnown RBP10.36□□□□□ -0.75
CXCL12-205ENST00000395794 MEF2DQ14814 521 aa10.36□□□□□ -0.75
CXCL12-205ENST00000395794 SPCS2Q15005 226 aa10.36□□□□□ -0.75
CXCL12-205ENST00000395794 TRIM16LQ309B1 348 aa10.36□□□□□ -0.75
CXCL12-205ENST00000395794 STEAP1BQ6NZ63 245 aa10.36□□□□□ -0.75
CXCL12-205ENST00000395794 BTNL8Q6UX41 500 aa10.36□□□□□ -0.75
CXCL12-205ENST00000395794 LHFPL1Q86WI0 220 aa10.36□□□□□ -0.75
CXCL12-205ENST00000395794 TMEM61Q8N0U2 210 aa10.36□□□□□ -0.75
CXCL12-205ENST00000395794 RNASE11Q8TAA1 199 aaKnown RBP10.36□□□□□ -0.75
CXCL12-205ENST00000395794 MISP3Q96FF7 219 aa10.36□□□□□ -0.75
CXCL12-205ENST00000395794 CITED4Q96RK1 184 aa10.36□□□□□ -0.75
CXCL12-205ENST00000395794 BCL7BQ9BQE9 202 aa10.36□□□□□ -0.75
CXCL12-205ENST00000395794 PDCD10Q9BUL8 212 aa10.36□□□□□ -0.75
CXCL12-205ENST00000395794 ZNF436Q9C0F3 470 aaPredicted RBP10.36□□□□□ -0.75
CXCL12-205ENST00000395794 MLXQ9UH92 298 aa10.36□□□□□ -0.75
CXCL12-205ENST00000395794 SELENOKQ9Y6D0 94 aa10.36□□□□□ -0.75
CXCL12-205ENST00000395794 CEPT1Q9Y6K0 416 aa10.36□□□□□ -0.75
CXCL12-205ENST00000395794 TRAV25A0A0B4J276 109 aa10.35□□□□□ -0.75
CXCL12-205ENST00000395794 DISC1C4P0D8 188 aa10.35□□□□□ -0.75
CXCL12-205ENST00000395794 CTDSP2O14595 271 aa10.35□□□□□ -0.75
CXCL12-205ENST00000395794 NUPL2O15504 423 aaKnown RBP10.35□□□□□ -0.75
CXCL12-205ENST00000395794 B3GALNT1O75752 331 aa10.35□□□□□ -0.75
CXCL12-205ENST00000395794 SCAF4O95104 1147 aaKnown RBP10.35□□□□□ -0.75
CXCL12-205ENST00000395794 IGKV1-39P01597 117 aa10.35□□□□□ -0.75
CXCL12-205ENST00000395794 CD74P04233 296 aa10.35□□□□□ -0.75
CXCL12-205ENST00000395794 IGKV1D-39P04432 117 aa10.35□□□□□ -0.75
CXCL12-205ENST00000395794 SNCAP37840 140 aa10.35□□□□□ -0.75
CXCL12-205ENST00000395794 MFAP2P55001 183 aa10.35□□□□□ -0.75
CXCL12-205ENST00000395794 PRCDQ00LT1 54 aa10.35□□□□□ -0.75
CXCL12-205ENST00000395794 IL18Q14116 193 aa10.35□□□□□ -0.75
CXCL12-205ENST00000395794 LAMTOR1Q6IAA8 161 aa10.35□□□□□ -0.75
CXCL12-205ENST00000395794 OR2C3Q8N628 320 aa10.35□□□□□ -0.75
CXCL12-205ENST00000395794 DEFB125Q8N687 156 aa10.35□□□□□ -0.75
CXCL12-205ENST00000395794 TMEM190Q8WZ59 177 aa10.35□□□□□ -0.75
CXCL12-205ENST00000395794 ISOC1Q96CN7 298 aa10.35□□□□□ -0.75
CXCL12-205ENST00000395794 RRNAD1Q96FB5 475 aaKnown RBP10.35□□□□□ -0.75
CXCL12-205ENST00000395794 DIRAS2Q96HU8 199 aa10.35□□□□□ -0.75
CXCL12-205ENST00000395794 C20orf24Q9BUV8 137 aa10.35□□□□□ -0.75
CXCL12-205ENST00000395794 MIXL1Q9H2W2 232 aa10.35□□□□□ -0.75
CXCL12-205ENST00000395794 SRD5A3Q9H8P0 318 aa10.35□□□□□ -0.75
CXCL12-205ENST00000395794 DAZ1Q9NQZ3 744 aaKnown RBP10.35□□□□□ -0.75
CXCL12-205ENST00000395794 C14orf166Q9Y224 244 aaKnown RBP10.35□□□□□ -0.75
CXCL12-205ENST00000395794 K7EIM0 57 aa10.34□□□□□ -0.75
CXCL12-205ENST00000395794 NDUFA4O00483 81 aa10.34□□□□□ -0.75
CXCL12-205ENST00000395794 IFNA17P01571 189 aa10.34□□□□□ -0.75
CXCL12-205ENST00000395794 C8orf88P0DMB2 117 aa10.34□□□□□ -0.75
CXCL12-205ENST00000395794 MFAP4P55083 255 aa10.34□□□□□ -0.75
CXCL12-205ENST00000395794 RELQ04864 619 aaPredicted RBP10.34□□□□□ -0.75
CXCL12-205ENST00000395794 SLC35G3Q8N808 338 aa10.34□□□□□ -0.75
CXCL12-205ENST00000395794 OR4D10Q8NGI6 311 aa10.34□□□□□ -0.75
CXCL12-205ENST00000395794 OR13C8Q8NGS7 320 aa10.34□□□□□ -0.75
CXCL12-205ENST00000395794 MARCH1Q8TCQ1 289 aa10.34□□□□□ -0.75
CXCL12-205ENST00000395794 TP53RKQ96S44 253 aa10.34□□□□□ -0.75
CXCL12-205ENST00000395794 C6orf62Q9GZU0 229 aaPredicted RBP10.34□□□□□ -0.75
CXCL12-205ENST00000395794 ENY2Q9NPA8 101 aa10.34□□□□□ -0.75
CXCL12-205ENST00000395794 CCDC59Q9P031 241 aaKnown RBP10.34□□□□□ -0.75
CXCL12-205ENST00000395794 TEX13DA0A0J9YY54 714 aaPredicted RBP10.33□□□□□ -0.76
CXCL12-205ENST00000395794 YIF1AO95070 293 aa10.33□□□□□ -0.76
CXCL12-205ENST00000395794 CTSDP07339 412 aaPredicted RBP10.33□□□□□ -0.76
CXCL12-205ENST00000395794 RPL5P46777 297 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms