RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 GDPD1Q8N9F7 314 aa11.52□□□□□ -0.57
SNCA-205ENST00000394991 Q8NAQ8 132 aa11.52□□□□□ -0.57
SNCA-205ENST00000394991 S100A16Q96FQ6 103 aaKnown RBP11.52□□□□□ -0.57
SNCA-205ENST00000394991 AUNIPQ9H7T9 357 aa11.52□□□□□ -0.57
SNCA-205ENST00000394991 THYN1Q9P016 225 aa11.52□□□□□ -0.57
SNCA-205ENST00000394991 SMPXQ9UHP9 88 aa11.52□□□□□ -0.57
SNCA-205ENST00000394991 IGKV3-7A0A075B6H7 116 aa11.51□□□□□ -0.57
SNCA-205ENST00000394991 PRSS29PA6NIE9 313 aa11.51□□□□□ -0.57
SNCA-205ENST00000394991 C11orf94C9JXX5 98 aa11.51□□□□□ -0.57
SNCA-205ENST00000394991 UPK2O00526 184 aa11.51□□□□□ -0.57
SNCA-205ENST00000394991 CHEK1O14757 476 aa11.51□□□□□ -0.57
SNCA-205ENST00000394991 TNFSF12O43508 249 aa11.51□□□□□ -0.57
SNCA-205ENST00000394991 ARPC4P59998 168 aa11.51□□□□□ -0.57
SNCA-205ENST00000394991 SPSB3Q6PJ21 355 aa11.51□□□□□ -0.57
SNCA-205ENST00000394991 SLC25A46Q96AG3 418 aa11.51□□□□□ -0.57
SNCA-205ENST00000394991 SRSF8Q9BRL6 282 aaKnown RBP11.51□□□□□ -0.57
SNCA-205ENST00000394991 MRPS26Q9BYN8 205 aaKnown RBP11.51□□□□□ -0.57
SNCA-205ENST00000394991 ANXA10Q9UJ72 324 aa11.51□□□□□ -0.57
SNCA-205ENST00000394991 IGHV4-4A0A075B6R2 117 aa11.5□□□□□ -0.57
SNCA-205ENST00000394991 IGHV3-49A0A0A0MS15 119 aa11.5□□□□□ -0.57
SNCA-205ENST00000394991 C15orf62A8K5M9 175 aa11.5□□□□□ -0.57
SNCA-205ENST00000394991 RBMY1A1P0DJD3 496 aaKnown RBP11.5□□□□□ -0.57
SNCA-205ENST00000394991 RBMY1CP0DJD4 496 aa11.5□□□□□ -0.57
SNCA-205ENST00000394991 WT1-ASQ06250 92 aa11.5□□□□□ -0.57
SNCA-205ENST00000394991 TMEM187Q14656 261 aa11.5□□□□□ -0.57
SNCA-205ENST00000394991 RBMY1FQ15415 496 aaKnown RBP11.5□□□□□ -0.57
SNCA-205ENST00000394991 POU2AF1Q16633 256 aa11.5□□□□□ -0.57
SNCA-205ENST00000394991 SPAG16Q8N0X2 631 aa11.5□□□□□ -0.57
SNCA-205ENST00000394991 BEST4Q8NFU0 473 aa11.5□□□□□ -0.57
SNCA-205ENST00000394991 SCARB1Q8WTV0 552 aa11.5□□□□□ -0.57
SNCA-205ENST00000394991 RHPN1-AS1Q9BWJ2 59 aa11.5□□□□□ -0.57
SNCA-205ENST00000394991 QTRT1Q9BXR0 403 aaKnown RBP11.5□□□□□ -0.57
SNCA-205ENST00000394991 NAA50Q9GZZ1 169 aaKnown RBP11.5□□□□□ -0.57
SNCA-205ENST00000394991 HRH4Q9H3N8 390 aa11.5□□□□□ -0.57
SNCA-205ENST00000394991 CCL28Q9NRJ3 127 aa11.5□□□□□ -0.57
SNCA-205ENST00000394991 C21orf62Q9NYP8 219 aa11.5□□□□□ -0.57
SNCA-205ENST00000394991 COMMD3Q9UBI1 195 aa11.5□□□□□ -0.57
SNCA-205ENST00000394991 IGHV7-4-1A0A0J9YVY3 117 aa11.49□□□□□ -0.57
SNCA-205ENST00000394991 MEIS3P1A6NDR6 274 aa11.49□□□□□ -0.57
SNCA-205ENST00000394991 OR13C7P0DN81 318 aa11.49□□□□□ -0.57
SNCA-205ENST00000394991 HLA-DMBP28068 263 aa11.49□□□□□ -0.57
SNCA-205ENST00000394991 TMEM69Q5SWH9 247 aa11.49□□□□□ -0.57
SNCA-205ENST00000394991 GPR107Q5VW38 600 aa11.49□□□□□ -0.57
SNCA-205ENST00000394991 FAM90A2PQ658T7 463 aa11.49□□□□□ -0.57
SNCA-205ENST00000394991 SLC25A24Q6NUK1 477 aa11.49□□□□□ -0.57
SNCA-205ENST00000394991 Q6ZTC4 211 aa11.49□□□□□ -0.57
SNCA-205ENST00000394991 HOGA1Q86XE5 327 aa11.49□□□□□ -0.57
SNCA-205ENST00000394991 GBGT1Q8N5D6 347 aa11.49□□□□□ -0.57
SNCA-205ENST00000394991 COMMD5Q9GZQ3 224 aa11.49□□□□□ -0.57
SNCA-205ENST00000394991 IGHV4-28A0A0C4DH34 117 aa11.48□□□□□ -0.57
SNCA-205ENST00000394991 K7EIM0 57 aa11.48□□□□□ -0.57
SNCA-205ENST00000394991 RBFOX2O43251 390 aaKnown RBP eCLIP11.48□□□□□ -0.57
SNCA-205ENST00000394991 SERPINE2P07093 398 aa11.48□□□□□ -0.57
SNCA-205ENST00000394991 RORCP51449 518 aa11.48□□□□□ -0.57
SNCA-205ENST00000394991 CMC4P56277 68 aaPredicted RBP11.48□□□□□ -0.57
SNCA-205ENST00000394991 TAS2R31P59538 309 aa11.48□□□□□ -0.57
SNCA-205ENST00000394991 GPR141Q7Z602 305 aa11.48□□□□□ -0.57
SNCA-205ENST00000394991 UBAC2Q8NBM4 344 aa11.48□□□□□ -0.57
SNCA-205ENST00000394991 TMEM116Q8NCL8 245 aa11.48□□□□□ -0.57
SNCA-205ENST00000394991 ATP6V0BQ99437 205 aa11.48□□□□□ -0.57
SNCA-205ENST00000394991 IFT46Q9NQC8 304 aa11.48□□□□□ -0.57
SNCA-205ENST00000394991 TMEM140Q9NV12 185 aa11.48□□□□□ -0.57
SNCA-205ENST00000394991 F11RQ9Y624 299 aaKnown RBP11.48□□□□□ -0.57
SNCA-205ENST00000394991 HSPG2P98160 4391 aa11.48□□□□□ -0.57
SNCA-205ENST00000394991 SULT1C2O00338 296 aa11.47□□□□□ -0.57
SNCA-205ENST00000394991 GABARAPO95166 117 aa11.47□□□□□ -0.57
SNCA-205ENST00000394991 EIF4EP06730 217 aaKnown RBP11.47□□□□□ -0.57
SNCA-205ENST00000394991 CTSGP08311 255 aa11.47□□□□□ -0.57
SNCA-205ENST00000394991 GIG44P09565 113 aaPredicted RBP11.47□□□□□ -0.57
SNCA-205ENST00000394991 FCGR2CP31995 323 aa11.47□□□□□ -0.57
SNCA-205ENST00000394991 CBX5P45973 191 aa11.47□□□□□ -0.57
SNCA-205ENST00000394991 TAS2R20P59543 309 aa11.47□□□□□ -0.57
SNCA-205ENST00000394991 CTF1Q16619 201 aa11.47□□□□□ -0.57
SNCA-205ENST00000394991 SECTM1Q8WVN6 248 aa11.47□□□□□ -0.57
SNCA-205ENST00000394991 AIFM2Q9BRQ8 373 aa11.47□□□□□ -0.57
SNCA-205ENST00000394991 IGHV3OR16-13A0A075B7E8 117 aa11.46□□□□□ -0.57
SNCA-205ENST00000394991 IGHV3-74A0A0B4J1X5 117 aa11.46□□□□□ -0.57
SNCA-205ENST00000394991 TRAV10A0A0B4J240 114 aa11.46□□□□□ -0.57
SNCA-205ENST00000394991 TEX50A0A1B0GTY4 177 aa11.46□□□□□ -0.57
SNCA-205ENST00000394991 SMIM31A0A1B0GVY4 71 aa11.46□□□□□ -0.57
SNCA-205ENST00000394991 C15orf61A6NNL5 157 aa11.46□□□□□ -0.57
SNCA-205ENST00000394991 M0R2N4 97 aa11.46□□□□□ -0.57
SNCA-205ENST00000394991 CYB5BO43169 146 aa11.46□□□□□ -0.57
SNCA-205ENST00000394991 HPRT1P00492 218 aa11.46□□□□□ -0.57
SNCA-205ENST00000394991 TRAPPC2P0DI81 140 aa11.46□□□□□ -0.57
SNCA-205ENST00000394991 TRAPPC2BP0DI82 140 aa11.46□□□□□ -0.57
SNCA-205ENST00000394991 NQO2P16083 231 aa11.46□□□□□ -0.57
SNCA-205ENST00000394991 MSMO1Q15800 293 aa11.46□□□□□ -0.57
SNCA-205ENST00000394991 Q56UQ5 140 aa11.46□□□□□ -0.57
SNCA-205ENST00000394991 LEMD1Q68G75 181 aa11.46□□□□□ -0.57
SNCA-205ENST00000394991 THOC7Q6I9Y2 204 aaKnown RBP11.46□□□□□ -0.57
SNCA-205ENST00000394991 ZNF575Q86XF7 245 aa11.46□□□□□ -0.57
SNCA-205ENST00000394991 NUPL2O15504 423 aaKnown RBP11.45□□□□□ -0.58
SNCA-205ENST00000394991 FGF2P09038 288 aa11.45□□□□□ -0.58
SNCA-205ENST00000394991 ALDH3B2P48448 385 aa11.45□□□□□ -0.58
SNCA-205ENST00000394991 DEFB131AP59861 70 aa11.45□□□□□ -0.58
SNCA-205ENST00000394991 PVRIGQ6DKI7 326 aa11.45□□□□□ -0.58
SNCA-205ENST00000394991 MZT2AQ6P582 158 aa11.45□□□□□ -0.58
SNCA-205ENST00000394991 FAM24BQ8N5W8 94 aa11.45□□□□□ -0.58
SNCA-205ENST00000394991 OR10C1Q96KK4 312 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms