RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 UCP1P25874 307 aa13.64□□□□□ -0.23
SHANK1-204ENST00000391814 GAGE2BQ13066 116 aa13.64□□□□□ -0.23
SHANK1-204ENST00000391814 GAGE2EQ4V326 116 aa13.64□□□□□ -0.23
SHANK1-204ENST00000391814 TMEM242Q9NWH2 141 aa13.64□□□□□ -0.23
SHANK1-204ENST00000391814 GAGE2DQ9UEU5 116 aa13.64□□□□□ -0.23
SHANK1-204ENST00000391814 C1orf210Q8IVY1 113 aa13.64□□□□□ -0.23
SHANK1-204ENST00000391814 TOMM7Q9P0U1 55 aa13.64□□□□□ -0.23
SHANK1-204ENST00000391814 CHTOPQ9Y3Y2 248 aaKnown RBP13.64□□□□□ -0.23
SHANK1-204ENST00000391814 ZNF831Q5JPB2 1677 aa13.64□□□□□ -0.23
SHANK1-204ENST00000391814 A0A1B0GW15 77 aa13.64□□□□□ -0.23
SHANK1-204ENST00000391814 OR52E5Q8NH55 327 aa13.64□□□□□ -0.23
SHANK1-204ENST00000391814 EPDR1Q9UM22 224 aa13.64□□□□□ -0.23
SHANK1-204ENST00000391814 IGHV3OR16-10A0A075B7F0 116 aa13.63□□□□□ -0.23
SHANK1-204ENST00000391814 FOXL1Q12952 345 aa13.63□□□□□ -0.23
SHANK1-204ENST00000391814 ZXDCQ2QGD7 858 aaPredicted RBP13.63□□□□□ -0.23
SHANK1-204ENST00000391814 VKORC1Q9BQB6 163 aa13.63□□□□□ -0.23
SHANK1-204ENST00000391814 HBDP02042 147 aa13.63□□□□□ -0.23
SHANK1-204ENST00000391814 CACNA1CQ13936 2221 aa13.63□□□□□ -0.23
SHANK1-204ENST00000391814 KBTBD11-OT1A0A1B0GTJ5 212 aa13.63□□□□□ -0.23
SHANK1-204ENST00000391814 UMODP07911 640 aa13.63□□□□□ -0.23
SHANK1-204ENST00000391814 FAM106CPP0CH98 169 aa13.63□□□□□ -0.23
SHANK1-204ENST00000391814 ADCYAP1P18509 176 aa13.63□□□□□ -0.23
SHANK1-204ENST00000391814 ATP5G2Q06055 141 aa13.63□□□□□ -0.23
SHANK1-204ENST00000391814 TRAV21A0A0B4J279 112 aa13.62□□□□□ -0.23
SHANK1-204ENST00000391814 PRB4P10163 310 aaPredicted RBP13.62□□□□□ -0.23
SHANK1-204ENST00000391814 ASIPP42127 132 aa13.62□□□□□ -0.23
SHANK1-204ENST00000391814 FAM159AQ6UWV7 190 aa13.62□□□□□ -0.23
SHANK1-204ENST00000391814 LSM4Q9Y4Z0 139 aaKnown RBP13.62□□□□□ -0.23
SHANK1-204ENST00000391814 PIKFYVEQ9Y2I7 2098 aa13.62□□□□□ -0.23
SHANK1-204ENST00000391814 MS4A6AQ9H2W1 248 aa13.62□□□□□ -0.23
SHANK1-204ENST00000391814 TRBV7-9A0A0J9YWB2 115 aa13.62□□□□□ -0.23
SHANK1-204ENST00000391814 RAX2Q96IS3 184 aa13.62□□□□□ -0.23
SHANK1-204ENST00000391814 RFNGQ9Y644 331 aa13.62□□□□□ -0.23
SHANK1-204ENST00000391814 JMJD8Q96S16 334 aa13.62□□□□□ -0.23
SHANK1-204ENST00000391814 RNASE4P34096 147 aaKnown RBP13.61□□□□□ -0.23
SHANK1-204ENST00000391814 GTSCR1Q86UQ5 136 aa13.61□□□□□ -0.23
SHANK1-204ENST00000391814 TRBV24-1A0A075B6N3 115 aa13.61□□□□□ -0.23
SHANK1-204ENST00000391814 A0A0A6YYD4 124 aa13.61□□□□□ -0.23
SHANK1-204ENST00000391814 NAPSAO96009 420 aa13.61□□□□□ -0.23
SHANK1-204ENST00000391814 KLF14Q8TD94 323 aaPredicted RBP13.61□□□□□ -0.23
SHANK1-204ENST00000391814 GAGE12BA1L429 117 aa13.61□□□□□ -0.23
SHANK1-204ENST00000391814 MPV17L2Q567V2 206 aa13.61□□□□□ -0.23
SHANK1-204ENST00000391814 FOXA2Q9Y261 457 aaPredicted RBP13.61□□□□□ -0.23
SHANK1-204ENST00000391814 TEX38Q6PEX7 206 aa13.61□□□□□ -0.23
SHANK1-204ENST00000391814 SLC22A18ASQ8N1D0 253 aa13.61□□□□□ -0.23
SHANK1-204ENST00000391814 PTGDSP41222 190 aa13.6□□□□□ -0.23
SHANK1-204ENST00000391814 TMEM186Q96B77 213 aa13.6□□□□□ -0.23
SHANK1-204ENST00000391814 OSTCQ9NRP0 149 aa13.6□□□□□ -0.23
SHANK1-204ENST00000391814 A0A1W2PRE2 83 aa13.6□□□□□ -0.23
SHANK1-204ENST00000391814 EDA2RQ9HAV5 297 aa13.6□□□□□ -0.23
SHANK1-204ENST00000391814 TDRD15B5MCY1 1934 aaKnown RBP13.6□□□□□ -0.23
SHANK1-204ENST00000391814 IGHV3-49A0A0A0MS15 119 aa13.6□□□□□ -0.23
SHANK1-204ENST00000391814 SAA1P0DJI8 122 aaPredicted RBP13.6□□□□□ -0.23
SHANK1-204ENST00000391814 SPINK8P0C7L1 97 aa13.6□□□□□ -0.23
SHANK1-204ENST00000391814 PAPPA-AS1Q5QFB9 102 aa13.6□□□□□ -0.23
SHANK1-204ENST00000391814 COX11Q9Y6N1 276 aa13.6□□□□□ -0.23
SHANK1-204ENST00000391814 SSBP2P81877 361 aaPredicted RBP13.6□□□□□ -0.23
SHANK1-204ENST00000391814 LCN12Q6JVE5 192 aa13.6□□□□□ -0.23
SHANK1-204ENST00000391814 ZNF703Q9H7S9 590 aaPredicted RBP13.59□□□□□ -0.23
SHANK1-204ENST00000391814 IGHV3-64A0A075B6Q5 118 aa13.59□□□□□ -0.23
SHANK1-204ENST00000391814 IGKV1D-13A0A0B4J2D9 117 aa13.59□□□□□ -0.23
SHANK1-204ENST00000391814 IGKV1-13P0DP09 117 aa13.59□□□□□ -0.23
SHANK1-204ENST00000391814 FAM71F2Q6NXP2 309 aa13.59□□□□□ -0.23
SHANK1-204ENST00000391814 MRPL52Q86TS9 123 aaKnown RBP13.59□□□□□ -0.23
SHANK1-204ENST00000391814 SLC25A2Q9BXI2 301 aa13.59□□□□□ -0.23
SHANK1-204ENST00000391814 POLR3KQ9Y2Y1 108 aaPredicted RBP13.59□□□□□ -0.23
SHANK1-204ENST00000391814 A0A1B0GW64 132 aa13.59□□□□□ -0.23
SHANK1-204ENST00000391814 A8MWP6 167 aa13.59□□□□□ -0.23
SHANK1-204ENST00000391814 NPIPB4C9JG80 1138 aa13.59□□□□□ -0.23
SHANK1-204ENST00000391814 J3QRE1 110 aa13.59□□□□□ -0.23
SHANK1-204ENST00000391814 GREM1O60565 184 aa13.59□□□□□ -0.23
SHANK1-204ENST00000391814 RAMP3O60896 148 aa13.59□□□□□ -0.23
SHANK1-204ENST00000391814 NPSP0C0P6 89 aa13.59□□□□□ -0.23
SHANK1-204ENST00000391814 FXYD7P58549 80 aa13.59□□□□□ -0.23
SHANK1-204ENST00000391814 GUSBP1Q15486 140 aa13.59□□□□□ -0.23
SHANK1-204ENST00000391814 TSPAN7P41732 249 aa13.59□□□□□ -0.23
SHANK1-204ENST00000391814 TIMP3P35625 211 aa13.59□□□□□ -0.23
SHANK1-204ENST00000391814 NPC2P61916 151 aa13.59□□□□□ -0.23
SHANK1-204ENST00000391814 ADAMTSL5Q6ZMM2 481 aa13.59□□□□□ -0.23
SHANK1-204ENST00000391814 LHFPL4Q7Z7J7 247 aa13.59□□□□□ -0.23
SHANK1-204ENST00000391814 APOBEC4Q8WW27 367 aaKnown RBP13.59□□□□□ -0.23
SHANK1-204ENST00000391814 ZNF501Q96CX3 271 aaPredicted RBP13.59□□□□□ -0.23
SHANK1-204ENST00000391814 SCARF2Q96GP6 870 aaPredicted RBP13.59□□□□□ -0.23
SHANK1-204ENST00000391814 RBBP6Q7Z6E9 1792 aaKnown RBP13.58□□□□□ -0.23
SHANK1-204ENST00000391814 SPAARA0A1B0GVQ0 90 aa13.58□□□□□ -0.23
SHANK1-204ENST00000391814 RBMY1BA6NDE4 496 aaKnown RBP13.58□□□□□ -0.23
SHANK1-204ENST00000391814 RBMY1EA6NEQ0 496 aaKnown RBP13.58□□□□□ -0.23
SHANK1-204ENST00000391814 C12orf77C9JDV5 145 aa13.58□□□□□ -0.23
SHANK1-204ENST00000391814 RBMY1DP0C7P1 496 aaKnown RBP13.58□□□□□ -0.23
SHANK1-204ENST00000391814 RBMY1A1P0DJD3 496 aaKnown RBP13.58□□□□□ -0.23
SHANK1-204ENST00000391814 RBMY1CP0DJD4 496 aa13.58□□□□□ -0.23
SHANK1-204ENST00000391814 MST1P26927 711 aa13.58□□□□□ -0.23
SHANK1-204ENST00000391814 Q6AWC8 147 aa13.58□□□□□ -0.23
SHANK1-204ENST00000391814 TNFRSF18Q9Y5U5 241 aa13.58□□□□□ -0.23
SHANK1-204ENST00000391814 H3BRM9 83 aa13.58□□□□□ -0.24
SHANK1-204ENST00000391814 PYYP10082 97 aa13.58□□□□□ -0.24
SHANK1-204ENST00000391814 KIR3DS1Q14943 382 aa13.58□□□□□ -0.24
SHANK1-204ENST00000391814 CFHR5Q9BXR6 569 aa13.58□□□□□ -0.24
SHANK1-204ENST00000391814 OTORQ9NRC9 128 aa13.58□□□□□ -0.24
SHANK1-204ENST00000391814 CCL21O00585 134 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms